RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 TMOD1P28289 359 aa8.07□□□□□ -1.12
SSXP3-201ENST00000442971 GJA4P35212 333 aa8.07□□□□□ -1.12
SSXP3-201ENST00000442971 ACADVLP49748 655 aa8.07□□□□□ -1.12
SSXP3-201ENST00000442971 ACTR2P61160 394 aa8.07□□□□□ -1.12
SSXP3-201ENST00000442971 SKOR1P84550 965 aa8.07□□□□□ -1.12
SSXP3-201ENST00000442971 INAVAQ3KP66 663 aa8.07□□□□□ -1.12
SSXP3-201ENST00000442971 STXBP5Q5T5C0 1151 aa8.07□□□□□ -1.12
SSXP3-201ENST00000442971 TRIM68Q6AZZ1 485 aa8.07□□□□□ -1.12
SSXP3-201ENST00000442971 CAPRIN2Q6IMN6 1127 aaKnown RBP8.07□□□□□ -1.12
SSXP3-201ENST00000442971 EFCAB12Q6NXP0 572 aa8.07□□□□□ -1.12
SSXP3-201ENST00000442971 IFNL3Q8IZI9 196 aa8.07□□□□□ -1.12
SSXP3-201ENST00000442971 ZCCHC9Q8N567 271 aaKnown RBP8.07□□□□□ -1.12
SSXP3-201ENST00000442971 JMJD4Q9H9V9 463 aa8.07□□□□□ -1.12
SSXP3-201ENST00000442971 UBN1Q9NPG3 1134 aa8.07□□□□□ -1.12
SSXP3-201ENST00000442971 PCDHB1Q9Y5F3 818 aa8.07□□□□□ -1.12
SSXP3-201ENST00000442971 TMEM131Q92545 1883 aa8.07□□□□□ -1.12
SSXP3-201ENST00000442971 M0R2C6 588 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 CBX4O00257 560 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 MAGEB2O15479 319 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 PCDHGA12O60330 932 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 GJB6O95452 261 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 PRAMEF12O95522 483 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 NADKO95544 446 aaPredicted RBP8.06□□□□□ -1.12
SSXP3-201ENST00000442971 LDOC1O95751 146 aaPredicted RBP8.06□□□□□ -1.12
SSXP3-201ENST00000442971 PRKCGP05129 697 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 GNLYP22749 145 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 LSSP48449 732 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 SCNN1GP51170 649 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 CDR1P51861 262 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 CLCA4Q14CN2 919 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 ZSCAN25Q6NSZ9 544 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 LRRC71Q8N4P6 559 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 ZNF461Q8TAF7 563 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 HASPINQ8TF76 798 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 RFFLQ8WZ73 363 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 FOXJ1Q92949 421 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 CNDP2Q96KP4 475 aaKnown RBP8.06□□□□□ -1.12
SSXP3-201ENST00000442971 EPAS1Q99814 870 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 GCOM2Q9BZD3 368 aaPredicted RBP8.06□□□□□ -1.12
SSXP3-201ENST00000442971 UNKQ9C0B0 810 aaKnown RBP8.06□□□□□ -1.12
SSXP3-201ENST00000442971 ADNPQ9H2P0 1102 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 CYP4F11Q9HBI6 524 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 CEP72Q9P209 647 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 MTRRQ9UBK8 725 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 VPS9D1Q9Y2B5 631 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 INSL5Q9Y5Q6 135 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 TACC2O95359 2948 aa8.06□□□□□ -1.12
SSXP3-201ENST00000442971 TCRBV21S2A2A0A5A6 115 aa8.05□□□□□ -1.12
SSXP3-201ENST00000442971 K7EQS6 105 aa8.05□□□□□ -1.12
SSXP3-201ENST00000442971 N4BP3O15049 544 aa8.05□□□□□ -1.12
SSXP3-201ENST00000442971 PPP1R11O60927 126 aaPredicted RBP8.05□□□□□ -1.12
SSXP3-201ENST00000442971 GNAI2P04899 355 aa8.05□□□□□ -1.12
SSXP3-201ENST00000442971 ARSAP15289 507 aa8.05□□□□□ -1.12
SSXP3-201ENST00000442971 GNAT2P19087 354 aa8.05□□□□□ -1.12
SSXP3-201ENST00000442971 MLH1P40692 756 aa8.05□□□□□ -1.12
SSXP3-201ENST00000442971 CLN3Q13286 438 aa8.05□□□□□ -1.12
SSXP3-201ENST00000442971 MTMR1Q13613 665 aa8.05□□□□□ -1.12
SSXP3-201ENST00000442971 HSP90AA2PQ14568 343 aaPredicted RBP8.05□□□□□ -1.12
SSXP3-201ENST00000442971 SMTNL2Q2TAL5 461 aa8.05□□□□□ -1.12
SSXP3-201ENST00000442971 TYW1BQ6NUM6 668 aa8.05□□□□□ -1.12
SSXP3-201ENST00000442971 TIPARPQ7Z3E1 657 aaKnown RBP8.05□□□□□ -1.12
SSXP3-201ENST00000442971 C12orf40Q86WS4 652 aa8.05□□□□□ -1.12
SSXP3-201ENST00000442971 TCEAL8Q8IYN2 117 aa8.05□□□□□ -1.12
SSXP3-201ENST00000442971 DNASE2BQ8WZ79 361 aa8.05□□□□□ -1.12
SSXP3-201ENST00000442971 ZFP42Q96MM3 310 aa8.05□□□□□ -1.12
SSXP3-201ENST00000442971 POLR1BQ9H9Y6 1135 aa8.05□□□□□ -1.12
SSXP3-201ENST00000442971 ESPL1Q14674 2120 aa8.05□□□□□ -1.12
SSXP3-201ENST00000442971 IGKV6D-21A0A0A0MT36 114 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 PATL2C9JE40 543 aaKnown RBP8.04□□□□□ -1.12
SSXP3-201ENST00000442971 SGK1O00141 431 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 BACH1O14867 736 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 NDUFS2O75306 463 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 VPS4BO75351 444 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 ABLIM3O94929 683 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 ATG7O95352 703 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 SEC24AO95486 1093 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 KRT7P08729 469 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 ITGA4P13612 1032 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 MRPS21P82921 87 aaKnown RBP8.04□□□□□ -1.12
SSXP3-201ENST00000442971 INSM1Q01101 510 aaPredicted RBP8.04□□□□□ -1.12
SSXP3-201ENST00000442971 FAM160B1Q5W0V3 765 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 TAOK1Q7L7X3 1001 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 CXXC5Q7LFL8 322 aaKnown RBP8.04□□□□□ -1.12
SSXP3-201ENST00000442971 MCEMP1Q8IX19 187 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 ALLCQ8N6M5 410 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 TXNDC5Q8NBS9 432 aaKnown RBP8.04□□□□□ -1.12
SSXP3-201ENST00000442971 KCNV2Q8TDN2 545 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 TMEM87BQ96K49 555 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 MIR1-1HGQ9H1L0 117 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 TMEM245Q9H330 911 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 CBX8Q9HC52 389 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 CACNG4Q9UBN1 327 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 ATXN7L1Q9ULK2 861 aaPredicted RBP8.04□□□□□ -1.12
SSXP3-201ENST00000442971 VPS4AQ9UN37 437 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 NOP58Q9Y2X3 529 aaKnown RBP8.04□□□□□ -1.12
SSXP3-201ENST00000442971 PCDHGA10Q9Y5H3 936 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 BAZ2BQ9UIF8 2168 aaKnown RBP8.04□□□□□ -1.12
SSXP3-201ENST00000442971 NFASCO94856 1347 aa8.04□□□□□ -1.12
SSXP3-201ENST00000442971 A0A1B0GVT2 93 aa8.03□□□□□ -1.12
SSXP3-201ENST00000442971 E2F8A0AVK6 867 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms