RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 WDR72Q3MJ13 1102 aa13.1□□□□□ -0.31
SLC48A1-202ENST00000442892 SLC39A12Q504Y0 691 aa13.1□□□□□ -0.31
SLC48A1-202ENST00000442892 LILRA6Q6PI73 481 aa13.1□□□□□ -0.31
SLC48A1-202ENST00000442892 CCDC149Q6ZUS6 474 aa13.1□□□□□ -0.31
SLC48A1-202ENST00000442892 OR10T2Q8NGX3 314 aa13.1□□□□□ -0.31
SLC48A1-202ENST00000442892 CXorf38Q8TB03 319 aa13.1□□□□□ -0.31
SLC48A1-202ENST00000442892 SYAP1Q96A49 352 aaPredicted RBP13.1□□□□□ -0.31
SLC48A1-202ENST00000442892 POMKQ9H5K3 350 aa13.1□□□□□ -0.31
SLC48A1-202ENST00000442892 DDX43Q9NXZ2 648 aaKnown RBP13.1□□□□□ -0.31
SLC48A1-202ENST00000442892 DENND4AQ7Z401 1863 aa13.1□□□□□ -0.31
SLC48A1-202ENST00000442892 HCRTO43612 131 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 ZMYND10O75800 440 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 SEC24AO95486 1093 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 VNN1O95497 513 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 HLA-DRAP01903 254 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 C4BPAP04003 597 aaKnown RBP13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 CYP11A1P05108 521 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 RAP1GAPP47736 663 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 PPP3CAQ08209 521 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 ZNF667Q5HYK9 610 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 TTI2Q6NXR4 508 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 SV2AQ7L0J3 742 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 TOP6BLQ8N6T0 577 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 CCDC150Q8NCX0 1101 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 OR6B3Q8NGW1 331 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 ZNF461Q8TAF7 563 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 HDAC7Q8WUI4 952 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 TMEM174Q8WUU8 243 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 BORCS6Q96GS4 357 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 SEPT5Q99719 369 aaPredicted RBP13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 DUSP9Q99956 384 aaKnown RBP13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 PI4K2AQ9BTU6 479 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 MKNK1Q9BUB5 465 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 COL25A1Q9BXS0 654 aaPredicted RBP13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 IMPG2Q9BZV3 1241 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 SNX25Q9H3E2 840 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 ZDHHC7Q9NXF8 308 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 GDAP2Q9NXN4 497 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 ABI2Q9NYB9 513 aaPredicted RBP13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 ARMCX3Q9UH62 379 aaPredicted RBP13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 AFF4Q9UHB7 1163 aaKnown RBP13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 VCANP13611 3396 aa13.09□□□□□ -0.31
SLC48A1-202ENST00000442892 TBC1D4O60343 1298 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 STX10O60499 249 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 XYLBO75191 536 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 SOAT2O75908 522 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 PDGFRBP09619 1106 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 ATICP31939 592 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 MXI1P50539 228 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 NLRP12P59046 1061 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 PSMC1P62191 440 aaKnown RBP13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 SOWAHAQ2M3V2 549 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 DPCR1Q3MIW9 517 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 ZACNQ401N2 412 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 C1orf220Q5T0J3 134 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 CCDC183Q5T5S1 534 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 TPGS2Q68CL5 300 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 SPOPLQ6IQ16 392 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 GET4Q7L5D6 327 aaPredicted RBP13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 GRASPQ7Z6J2 395 aaPredicted RBP13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 GPR149Q86SP6 731 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 OSTM1Q86WC4 334 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 DCP1BQ8IZD4 617 aaKnown RBP13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 TMEM86AQ8N2M4 240 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 ELMOD1Q8N336 334 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 FAM200AQ8TCP9 573 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 SUSD6Q92537 303 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 CEP63Q96MT8 703 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 NECTIN4Q96NY8 510 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 RTP3Q9BQQ7 232 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 MRPL45Q9BRJ2 306 aaKnown RBP13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 PHF7Q9BWX1 381 aaPredicted RBP13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 SRRTQ9BXP5 876 aaKnown RBP13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 OXCT2Q9BYC2 517 aaPredicted RBP13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 PRKD2Q9BZL6 878 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 SMYD3Q9H7B4 428 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 TMEM8AQ9HCN3 771 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 DACH1Q9UI36 760 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 SLC27A5Q9Y2P5 690 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 INSL5Q9Y5Q6 135 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 NCOR1O75376 2440 aa13.08□□□□□ -0.32
SLC48A1-202ENST00000442892 MTMR11A4FU01 709 aa13.07□□□□□ -0.32
SLC48A1-202ENST00000442892 IKBKBO14920 756 aa13.07□□□□□ -0.32
SLC48A1-202ENST00000442892 ABLIM3O94929 683 aa13.07□□□□□ -0.32
SLC48A1-202ENST00000442892 FGFR1OPO95684 399 aaKnown RBP13.07□□□□□ -0.32
SLC48A1-202ENST00000442892 HNRNPA1P09651 372 aaKnown RBP eCLIP13.07□□□□□ -0.32
SLC48A1-202ENST00000442892 P4HA1P13674 534 aa13.07□□□□□ -0.32
SLC48A1-202ENST00000442892 ATF2P15336 505 aa13.07□□□□□ -0.32
SLC48A1-202ENST00000442892 PCSK1P29120 753 aa13.07□□□□□ -0.32
SLC48A1-202ENST00000442892 GBP2P32456 591 aaPredicted RBP13.07□□□□□ -0.32
SLC48A1-202ENST00000442892 LHX1P48742 406 aa13.07□□□□□ -0.32
SLC48A1-202ENST00000442892 CLDN10P78369 228 aa13.07□□□□□ -0.32
SLC48A1-202ENST00000442892 NTHL1P78549 312 aa13.07□□□□□ -0.32
SLC48A1-202ENST00000442892 ZP2Q05996 745 aa13.07□□□□□ -0.32
SLC48A1-202ENST00000442892 TWF1Q12792 350 aa13.07□□□□□ -0.32
SLC48A1-202ENST00000442892 DUSP4Q13115 394 aa13.07□□□□□ -0.32
SLC48A1-202ENST00000442892 MGAT5BQ3V5L5 792 aa13.07□□□□□ -0.32
SLC48A1-202ENST00000442892 KRT39Q6A163 491 aa13.07□□□□□ -0.32
SLC48A1-202ENST00000442892 SASS6Q6UVJ0 657 aa13.07□□□□□ -0.32
SLC48A1-202ENST00000442892 C15orf39Q6ZRI6 1047 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms