RNA–Protein interactions for RNA: ENST00000442398.6

C2CD3-207, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 3,951 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-207ENST00000442398 RBM41Q96IZ5 413 aaKnown RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 MED10Q9BTT4 135 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 GPR88Q9GZN0 384 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 METTL5Q9NRN9 209 aaKnown RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 NOCTQ9UK39 431 aaKnown RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 PCDHA3Q9Y5H8 950 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 MAD1L1Q9Y6D9 718 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 NCANO14594 1321 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 GMNCA6NCL1 334 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 KIAA0391O15091 583 aaKnown RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 SPAG7O75391 227 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 ARIH2O95376 493 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 TGFB3P10600 412 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 CHN1P15882 459 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 ADORA2AP29274 412 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 MAN1A1P33908 653 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 HSPA9P38646 679 aaKnown RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 SLC1A1P43005 524 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 ADCY2Q08462 1091 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 TMEM132DQ14C87 1099 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 C1orf220Q5T0J3 134 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 TMEM63BQ5T3F8 832 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 NUGGCQ68CJ6 796 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 KCNV1Q6PIU1 500 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 MPZL3Q6UWV2 235 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 FAM47EQ6ZV65 393 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 SRLQ86TD4 932 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 C12orf56Q8IXR9 622 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 REPS2Q8NFH8 660 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 HPDLQ96IR7 371 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 PABPC3Q9H361 631 aaKnown RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 R3HDMLQ9H3Y0 253 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 APOBEC3GQ9HC16 384 aaKnown RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 TXNRD2Q9NNW7 524 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 SETD4Q9NVD3 440 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 NOD1Q9Y239 953 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 HES2Q9Y543 173 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 NFASCO94856 1347 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 FER1L6Q2WGJ9 1857 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 H3BRB1 525 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 MCF2LO15068 1137 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 CST8O60676 142 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 PIAS1O75925 651 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 GH1P01241 217 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 ZSCAN5DPP0CG00 497 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 ATP2A2P16615 1042 aaKnown RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 CYP2B6P20813 491 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 CDH6P55285 790 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 SLC8A3P57103 927 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 IFI35P80217 286 aaPredicted RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 BYSLQ13895 437 aaKnown RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 FAM133BQ5BKY9 247 aaKnown RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 PRAMEF19Q5SWL8 479 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 HHATQ5VTY9 493 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 PPM1EQ8WY54 764 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 RNF34Q969K3 372 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 ZBED3Q96IU2 234 aaPredicted RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 RBM15Q96T37 977 aaKnown RBP eCLIP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 PRMT1Q99873 361 aaKnown RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 TMEM121Q9BTD3 319 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 RNPEPQ9H4A4 650 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 TUT1Q9H6E5 874 aaKnown RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 TMBIM4Q9HC24 238 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 PIN4Q9Y237 131 aaKnown RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 PPP2R3BQ9Y5P8 575 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 A8MXQ7 604 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 DCDC2CA8MYV0 355 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 RASA4BC9J798 803 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 PDHXO00330 501 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 O00370 1275 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 RASA4O43374 803 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 ZC3H11AO75152 810 aaKnown RBP eCLIP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 PROSCO94903 275 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 PDGFRAP16234 1089 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 ATP4AP20648 1035 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 WNT7BP56706 349 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 TAS2R40P59535 323 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 LMNB2Q03252 620 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 PDIA2Q13087 525 aaKnown RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 CELF3Q5SZQ8 465 aaKnown RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 TWF2Q6IBS0 349 aaKnown RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 B3GNT9Q6UX72 402 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 APBB1IPQ7Z5R6 666 aaPredicted RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 BRSK2Q8IWQ3 736 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 IQCKQ8N0W5 287 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 TMEM130Q8N3G9 435 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 NME8Q8N427 588 aa6.5□□□□□ -1.37
C2CD3-207ENST00000442398 DHX33Q9H6R0 707 aaKnown RBP6.5□□□□□ -1.37
C2CD3-207ENST00000442398 SIP14410 1827 aa6.49□□□□□ -1.37
C2CD3-207ENST00000442398 PTPRJQ12913 1337 aa6.49□□□□□ -1.37
C2CD3-207ENST00000442398 A0A0B4J269 797 aa6.49□□□□□ -1.37
C2CD3-207ENST00000442398 LACTBL1A8MY62 500 aa6.49□□□□□ -1.37
C2CD3-207ENST00000442398 CAPN9O14815 690 aa6.49□□□□□ -1.37
C2CD3-207ENST00000442398 MAFO75444 373 aaPredicted RBP6.49□□□□□ -1.37
C2CD3-207ENST00000442398 NPTXRO95502 500 aa6.49□□□□□ -1.37
C2CD3-207ENST00000442398 NFICP08651 508 aa6.49□□□□□ -1.37
C2CD3-207ENST00000442398 LCP1P13796 627 aa6.49□□□□□ -1.37
C2CD3-207ENST00000442398 ETS1P14921 441 aa6.49□□□□□ -1.37
C2CD3-207ENST00000442398 BRAFP15056 766 aa6.49□□□□□ -1.37
C2CD3-207ENST00000442398 MAMLD1Q13495 774 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms