RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 SPOPO43791 374 aa17.71■□□□□ 0.43
PMS1-213ENST00000441310 ESRRAP11474 423 aaPredicted RBP17.71■□□□□ 0.43
PMS1-213ENST00000441310 ANPEPP15144 967 aa17.71■□□□□ 0.43
PMS1-213ENST00000441310 CYP3A7P24462 503 aa17.71■□□□□ 0.43
PMS1-213ENST00000441310 ADCY8P40145 1251 aa17.71■□□□□ 0.43
PMS1-213ENST00000441310 PIK3CAP42336 1068 aa17.71■□□□□ 0.43
PMS1-213ENST00000441310 HPCAP84074 193 aa17.71■□□□□ 0.43
PMS1-213ENST00000441310 PKN2Q16513 984 aaKnown RBP17.71■□□□□ 0.43
PMS1-213ENST00000441310 HP1BP3Q5SSJ5 553 aaPredicted RBP17.71■□□□□ 0.43
PMS1-213ENST00000441310 ZNF746Q6NUN9 644 aaPredicted RBP17.71■□□□□ 0.43
PMS1-213ENST00000441310 PHLDB2Q86SQ0 1253 aa17.71■□□□□ 0.43
PMS1-213ENST00000441310 WDR18Q9BV38 432 aa17.71■□□□□ 0.43
PMS1-213ENST00000441310 ATP8B3O60423 1300 aa17.71■□□□□ 0.43
PMS1-213ENST00000441310 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.71■□□□□ 0.43
PMS1-213ENST00000441310 HNRNPCL1O60812 293 aaKnown RBP17.71■□□□□ 0.43
PMS1-213ENST00000441310 ZBED4O75132 1171 aa17.71■□□□□ 0.43
PMS1-213ENST00000441310 CDC16Q13042 620 aa17.71■□□□□ 0.43
PMS1-213ENST00000441310 SGO2Q562F6 1265 aa17.71■□□□□ 0.43
PMS1-213ENST00000441310 SAMD7Q7Z3H4 446 aa17.71■□□□□ 0.43
PMS1-213ENST00000441310 TRABD2AQ86V40 505 aa17.71■□□□□ 0.43
PMS1-213ENST00000441310 PTCD3Q96EY7 689 aaKnown RBP17.71■□□□□ 0.43
PMS1-213ENST00000441310 SNF8Q96H20 258 aa17.71■□□□□ 0.43
PMS1-213ENST00000441310 KANSL3Q9P2N6 904 aa17.71■□□□□ 0.43
PMS1-213ENST00000441310 TNS1Q9HBL0 1735 aaKnown RBP17.71■□□□□ 0.42
PMS1-213ENST00000441310 EXOC1LA0A1B0GW35 172 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 MAGEB3O15480 346 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 FOSP01100 380 aaPredicted RBP17.7■□□□□ 0.42
PMS1-213ENST00000441310 PABPC4LP0CB38 370 aaKnown RBP17.7■□□□□ 0.42
PMS1-213ENST00000441310 ITIH2P19823 946 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 MUTP22033 750 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 POLD1P28340 1107 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 CAP2P40123 477 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 SIX1Q15475 284 aaPredicted RBP17.7■□□□□ 0.42
PMS1-213ENST00000441310 ISLR2Q6UXK2 745 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 SFR1Q86XK3 245 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 CFAP61Q8NHU2 1237 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 DENND1AQ8TEH3 1009 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 MAML1Q92585 1016 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 ZNF75CPQ92670 426 aaPredicted RBP17.7■□□□□ 0.42
PMS1-213ENST00000441310 SLC35C1Q96A29 364 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 REEP2Q9BRK0 252 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 NDE1Q9NXR1 346 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 GJA3Q9Y6H8 435 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 ARFGEF1Q9Y6D6 1849 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 PGM3O95394 542 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 TROVE2P10155 538 aaKnown RBP eCLIP17.7■□□□□ 0.42
PMS1-213ENST00000441310 GALK1P51570 392 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 SLC12A3P55017 1021 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 DUS1LQ6P1R4 473 aaKnown RBP17.7■□□□□ 0.42
PMS1-213ENST00000441310 JDP2Q8WYK2 163 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 NAP1L4Q99733 375 aaKnown RBP17.7■□□□□ 0.42
PMS1-213ENST00000441310 ALG13Q9NP73 1137 aaKnown RBP17.7■□□□□ 0.42
PMS1-213ENST00000441310 CHST7Q9NS84 486 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 ACTL7BQ9Y614 415 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 GGPS1O95749 300 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 POLR2MP0CAP2 368 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 CYP1B1Q16678 543 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 LVRNQ6Q4G3 990 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 LDHDQ86WU2 507 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 SYT2Q8N9I0 419 aaPredicted RBP17.7■□□□□ 0.42
PMS1-213ENST00000441310 ERMNQ8TAM6 284 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 EIF2AK1Q9BQI3 630 aaKnown RBP17.7■□□□□ 0.42
PMS1-213ENST00000441310 IL1RAPL1Q9NZN1 696 aa17.7■□□□□ 0.42
PMS1-213ENST00000441310 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.7■□□□□ 0.42
PMS1-213ENST00000441310 C2orf71A6NGG8 1288 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 FTLP02792 175 aaPredicted RBP17.69■□□□□ 0.42
PMS1-213ENST00000441310 ATF2P15336 505 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 KCNA1Q09470 495 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 MAPK6Q16659 721 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 TBC1D10BQ4KMP7 808 aaPredicted RBP17.69■□□□□ 0.42
PMS1-213ENST00000441310 MAP7D3Q8IWC1 876 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 SLC25A41Q8N5S1 370 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 SLC20A1Q8WUM9 679 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 PPP2R3CQ969Q6 453 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 MBOAT7Q96N66 472 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 RUSC1Q9BVN2 902 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 PIM2Q9P1W9 311 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 ZMYM2Q9UBW7 1377 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 TCEA3O75764 348 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 EIF4BP23588 611 aaKnown RBP17.69■□□□□ 0.42
PMS1-213ENST00000441310 STAT4Q14765 748 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 CIAPIN1Q6FI81 312 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 CCDC62Q6P9F0 684 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 PPP4R3CPQ6ZMV5 832 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 TTC7BQ86TV6 843 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 RHOT2Q8IXI1 618 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 CHURC1Q8WUH1 139 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 CLPTM1LQ96KA5 538 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 MYOZ2Q9NPC6 264 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 ARMCX1Q9P291 453 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 BCS1LQ9Y276 419 aa17.69■□□□□ 0.42
PMS1-213ENST00000441310 ARP10275 920 aa17.68■□□□□ 0.42
PMS1-213ENST00000441310 SH3BGRP55822 239 aaPredicted RBP17.68■□□□□ 0.42
PMS1-213ENST00000441310 HYIQ5T013 277 aa17.68■□□□□ 0.42
PMS1-213ENST00000441310 FAM118BQ9BPY3 351 aa17.68■□□□□ 0.42
PMS1-213ENST00000441310 SH2D3AQ9BRG2 576 aa17.68■□□□□ 0.42
PMS1-213ENST00000441310 CCDC28BQ9BUN5 200 aa17.68■□□□□ 0.42
PMS1-213ENST00000441310 C12orf65Q9H3J6 166 aaKnown RBP17.68■□□□□ 0.42
PMS1-213ENST00000441310 KIAA1586Q9HCI6 787 aa17.68■□□□□ 0.42
PMS1-213ENST00000441310 CYLDQ9NQC7 956 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms