RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ARHGAP39Q9C0H5 1083 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 NUP62CLQ9H1M0 184 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 MAGEH1Q9H213 219 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 GRPEL1Q9HAV7 217 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 SPON1Q9HCB6 807 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 KCTD5Q9NXV2 234 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 EIF2B4Q9UI10 523 aaKnown RBP4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZHX1Q9UKY1 873 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZNF711Q9Y462 761 aa4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 MTF2Q9Y483 593 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P12-201ENST00000438594 FAM25EA8MYX2 175 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 HOXC11O43248 304 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 DLX3O60479 287 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 BBOX1O75936 387 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 UBXN7O94888 489 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 SGPL1O95470 568 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 STARD3NLO95772 234 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 CHGBP05060 677 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 CYP17A1P05093 508 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 CCDC175P0C221 793 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 ALAS1P13196 640 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 XBP1P17861 261 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 CLCN2P51788 898 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 SLC12A2P55011 1212 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 SCAND1P57086 179 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 COX10Q12887 443 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 ACAP2Q15057 778 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 NTRK3Q16288 839 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 KRTAP15-1Q3LI76 137 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 MMEL1Q495T6 779 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 TRIM68Q6AZZ1 485 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 JMJD6Q6NYC1 403 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 GGT6Q6P531 493 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 LBX2Q6XYB7 198 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 DENND1CQ8IV53 801 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 CPOQ8IVL8 374 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 SLC44A2Q8IWA5 706 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZNF619Q8N2I2 560 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZNF808Q8N4W9 903 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZNF527Q8NB42 609 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 KREMEN2Q8NCW0 462 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 IL17DQ8TAD2 202 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 CHTF18Q8WVB6 975 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZNF606Q8WXB4 792 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 CLEC4DQ8WXI8 215 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 SLC5A5Q92911 643 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 PTPRN2Q92932 1015 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 PHKBQ93100 1093 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 RRP36Q96EU6 259 aaKnown RBP4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 SPATA17Q96L03 361 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 C7orf25Q9BPX7 421 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 LRFN3Q9BTN0 628 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 SORBS1Q9BX66 1292 aaKnown RBP4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 CARD11Q9BXL7 1154 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 UNKQ9C0B0 810 aaKnown RBP4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 WDR26Q9H7D7 661 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 XAB2Q9HCS7 855 aaKnown RBP4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 STARD7Q9NQZ5 370 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 THG1LQ9NWX6 298 aaKnown RBP4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 POGKQ9P215 609 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 ITGB1BP2Q9UKP3 347 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 OAZ3Q9UMX2 235 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 C19orf53Q9UNZ5 99 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 AGTPBP1Q9UPW5 1226 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 NR2E1Q9Y466 385 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 PCDHGB5Q9Y5G0 923 aa4.04□□□□□ -1.76
HMGB1P12-201ENST00000438594 RHPN2P1A8MT19 583 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 TRAF5O00463 557 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 IRAK2O43187 625 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 GAS7O60861 476 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 COQ9O75208 318 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 APBB3O95704 486 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 CRTAMO95727 393 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 ENO2P09104 434 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 THEGLP0DJG4 465 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 SFTPCP11686 197 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 RPS2P15880 293 aaKnown RBP4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 ATP2A2P16615 1042 aaKnown RBP4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 ALOX12P18054 663 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 BTF3P20290 206 aaKnown RBP4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 MAKP20794 623 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 IL11P20809 199 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 HIBADHP31937 336 aaKnown RBP4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 MC4RP32245 332 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 HOXD13P35453 343 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 PRPHP41219 470 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 HNF4AP41235 474 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 GPR3P46089 330 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 EVCP57679 992 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZNF543Q08ER8 600 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 AP1B1Q10567 949 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 TUSC3Q13454 348 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 SEMA3AQ14563 771 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 STARD3Q14849 445 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 TNIP1Q15025 636 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 CLUL1Q15846 466 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 FAM110CQ1W6H9 321 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 RNF151Q2KHN1 245 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 SHROOM1Q2M3G4 852 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms