RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 RELL1Q8IUW5 271 aa19.68■□□□□ 0.74
CLK1-205ENST00000434813 RCOR2Q8IZ40 523 aa19.68■□□□□ 0.74
CLK1-205ENST00000434813 TMEM35BQ8NCS4 154 aa19.68■□□□□ 0.74
CLK1-205ENST00000434813 KAT2BQ92831 832 aa19.68■□□□□ 0.74
CLK1-205ENST00000434813 CABS1Q96KC9 395 aa19.68■□□□□ 0.74
CLK1-205ENST00000434813 SLITRK1Q96PX8 696 aa19.68■□□□□ 0.74
CLK1-205ENST00000434813 TCEA3O75764 348 aa19.68■□□□□ 0.74
CLK1-205ENST00000434813 HOXC6P09630 235 aa19.68■□□□□ 0.74
CLK1-205ENST00000434813 BRD2P25440 801 aaKnown RBP19.68■□□□□ 0.74
CLK1-205ENST00000434813 KLRC2P26717 231 aa19.68■□□□□ 0.74
CLK1-205ENST00000434813 MARK3P27448 753 aa19.68■□□□□ 0.74
CLK1-205ENST00000434813 ATP5DP30049 168 aa19.68■□□□□ 0.74
CLK1-205ENST00000434813 TAP1Q03518 808 aa19.68■□□□□ 0.74
CLK1-205ENST00000434813 EEPD1Q7L9B9 569 aa19.68■□□□□ 0.74
CLK1-205ENST00000434813 TRIM50Q86XT4 487 aa19.68■□□□□ 0.74
CLK1-205ENST00000434813 IPO4Q8TEX9 1081 aaKnown RBP19.68■□□□□ 0.74
CLK1-205ENST00000434813 PCDHGC3Q9UN70 934 aa19.68■□□□□ 0.74
CLK1-205ENST00000434813 CNMDO75829 334 aa19.67■□□□□ 0.74
CLK1-205ENST00000434813 SRGAP2CP0DJJ0 459 aa19.67■□□□□ 0.74
CLK1-205ENST00000434813 PTPN7P35236 360 aa19.67■□□□□ 0.74
CLK1-205ENST00000434813 VPS41P49754 854 aa19.67■□□□□ 0.74
CLK1-205ENST00000434813 LMNB2Q03252 620 aa19.67■□□□□ 0.74
CLK1-205ENST00000434813 PLCB4Q15147 1175 aa19.67■□□□□ 0.74
CLK1-205ENST00000434813 PPP1R15BQ5SWA1 713 aa19.67■□□□□ 0.74
CLK1-205ENST00000434813 CELF3Q5SZQ8 465 aaKnown RBP19.67■□□□□ 0.74
CLK1-205ENST00000434813 IZUMO3Q5VZ72 239 aa19.67■□□□□ 0.74
CLK1-205ENST00000434813 DRICH1Q6PGQ1 229 aaPredicted RBP19.67■□□□□ 0.74
CLK1-205ENST00000434813 MPZL3Q6UWV2 235 aa19.67■□□□□ 0.74
CLK1-205ENST00000434813 TSHZ1Q6ZSZ6 1077 aa19.67■□□□□ 0.74
CLK1-205ENST00000434813 CCDC121Q6ZUS5 278 aa19.67■□□□□ 0.74
CLK1-205ENST00000434813 EXOC3L1Q86VI1 746 aa19.67■□□□□ 0.74
CLK1-205ENST00000434813 LRRC71Q8N4P6 559 aa19.67■□□□□ 0.74
CLK1-205ENST00000434813 CCHCR1Q8TD31 782 aa19.67■□□□□ 0.74
CLK1-205ENST00000434813 FGD4Q96M96 766 aa19.67■□□□□ 0.74
CLK1-205ENST00000434813 MCEEQ96PE7 176 aa19.67■□□□□ 0.74
CLK1-205ENST00000434813 ZNF408Q9H9D4 720 aa19.67■□□□□ 0.74
CLK1-205ENST00000434813 NINJ2Q9NZG7 142 aa19.67■□□□□ 0.74
CLK1-205ENST00000434813 CAPN7Q9Y6W3 813 aa19.67■□□□□ 0.74
CLK1-205ENST00000434813 LIASO43766 372 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 SLC25A27O95847 323 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 KRT1P04264 644 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 EIF4BP23588 611 aaKnown RBP19.66■□□□□ 0.74
CLK1-205ENST00000434813 ASPAP45381 313 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 TRPC3Q13507 836 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 ZNF699Q32M78 642 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 HSDL1Q3SXM5 330 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 GPAT2Q6NUI2 795 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 CNPY4Q8N129 248 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 NIPA2Q8N8Q9 360 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 FAM212AQ96EL1 285 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 SLC10A4Q96EP9 437 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 FAM118BQ9BPY3 351 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 JPH2Q9BR39 696 aaPredicted RBP19.66■□□□□ 0.74
CLK1-205ENST00000434813 FOXP3Q9BZS1 431 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 PTPRHQ9HD43 1115 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 NOP56O00567 594 aaKnown RBP19.66■□□□□ 0.74
CLK1-205ENST00000434813 ASAP2O43150 1006 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 TJP3O95049 919 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 TCF4P15884 667 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 OSBPP22059 807 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 COPS2P61201 443 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 ACTN3Q08043 901 aaPredicted RBP19.66■□□□□ 0.74
CLK1-205ENST00000434813 CNGA2Q16280 664 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 KYNUQ16719 465 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 HIBCHQ6NVY1 386 aaPredicted RBP19.66■□□□□ 0.74
CLK1-205ENST00000434813 CEP128Q6ZU80 1094 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 P3H4Q92791 437 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 XYLT2Q9H1B5 865 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 ACTR5Q9H9F9 607 aaPredicted RBP19.66■□□□□ 0.74
CLK1-205ENST00000434813 KLHL11Q9NVR0 708 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 ANK1P16157 1881 aa19.66■□□□□ 0.74
CLK1-205ENST00000434813 ACKR2O00590 384 aa19.65■□□□□ 0.74
CLK1-205ENST00000434813 B4GALT4O60513 344 aa19.65■□□□□ 0.74
CLK1-205ENST00000434813 TFAMQ00059 246 aaKnown RBP19.65■□□□□ 0.74
CLK1-205ENST00000434813 OGDHQ02218 1023 aa19.65■□□□□ 0.74
CLK1-205ENST00000434813 SNAPC2Q13487 334 aa19.65■□□□□ 0.74
CLK1-205ENST00000434813 PIGHQ14442 188 aaPredicted RBP19.65■□□□□ 0.74
CLK1-205ENST00000434813 CCDC38Q502W7 563 aa19.65■□□□□ 0.74
CLK1-205ENST00000434813 DCUN1D2Q6PH85 259 aa19.65■□□□□ 0.74
CLK1-205ENST00000434813 MFSD7Q6UXD7 560 aa19.65■□□□□ 0.74
CLK1-205ENST00000434813 ARHGEF2Q92974 986 aaKnown RBP19.65■□□□□ 0.74
CLK1-205ENST00000434813 FZD8Q9H461 694 aa19.65■□□□□ 0.74
CLK1-205ENST00000434813 DNAJC17Q9NVM6 304 aaKnown RBP19.65■□□□□ 0.74
CLK1-205ENST00000434813 CEP83Q9Y592 693 aa19.65■□□□□ 0.74
CLK1-205ENST00000434813 IVNS1ABPQ9Y6Y0 642 aa19.65■□□□□ 0.74
CLK1-205ENST00000434813 PI4K2BG5E9Z4 385 aa19.64■□□□□ 0.74
CLK1-205ENST00000434813 TNNC2P02585 160 aa19.64■□□□□ 0.74
CLK1-205ENST00000434813 YY1P25490 414 aa19.64■□□□□ 0.74
CLK1-205ENST00000434813 YWHAEP62258 255 aaKnown RBP19.64■□□□□ 0.74
CLK1-205ENST00000434813 TFDP1Q14186 410 aa19.64■□□□□ 0.74
CLK1-205ENST00000434813 ATP13A4Q4VNC1 1196 aa19.64■□□□□ 0.74
CLK1-205ENST00000434813 ZNF394Q53GI3 561 aa19.64■□□□□ 0.74
CLK1-205ENST00000434813 LDLRAD1Q5T700 205 aa19.64■□□□□ 0.74
CLK1-205ENST00000434813 ATF7IP2Q5U623 682 aa19.64■□□□□ 0.74
CLK1-205ENST00000434813 MAP1SQ66K74 1059 aaPredicted RBP19.64■□□□□ 0.74
CLK1-205ENST00000434813 SPOCD1Q6ZMY3 1216 aa19.64■□□□□ 0.74
CLK1-205ENST00000434813 ZCCHC9Q8N567 271 aaKnown RBP19.64■□□□□ 0.74
CLK1-205ENST00000434813 TFAP2BQ92481 460 aa19.64■□□□□ 0.74
CLK1-205ENST00000434813 PRMT1Q99873 361 aaKnown RBP19.64■□□□□ 0.74
CLK1-205ENST00000434813 OSBPL7Q9BZF2 842 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms