RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 YBX2Q9Y2T7 364 aaKnown RBP24.8■■□□□ 1.56
SMARCAL1-208ENST00000434435 KRT5P13647 590 aa24.79■■□□□ 1.56
SMARCAL1-208ENST00000434435 TKTP29401 623 aaKnown RBP24.79■■□□□ 1.56
SMARCAL1-208ENST00000434435 SOX5P35711 763 aa24.79■■□□□ 1.56
SMARCAL1-208ENST00000434435 BMPR1AP36894 532 aa24.79■■□□□ 1.56
SMARCAL1-208ENST00000434435 CCDC173Q0VFZ6 552 aa24.79■■□□□ 1.56
SMARCAL1-208ENST00000434435 PLVAPQ9BX97 442 aa24.79■■□□□ 1.56
SMARCAL1-208ENST00000434435 STK39Q9UEW8 545 aa24.79■■□□□ 1.56
SMARCAL1-208ENST00000434435 TIMM13Q9Y5L4 95 aaPredicted RBP24.79■■□□□ 1.56
SMARCAL1-208ENST00000434435 MYH10P35580 1976 aa24.79■■□□□ 1.56
SMARCAL1-208ENST00000434435 FOXN3O00409 490 aaPredicted RBP24.78■■□□□ 1.56
SMARCAL1-208ENST00000434435 CILPO75339 1184 aa24.78■■□□□ 1.56
SMARCAL1-208ENST00000434435 FGF18O76093 207 aa24.78■■□□□ 1.56
SMARCAL1-208ENST00000434435 PNMA6AP0CW24 399 aaPredicted RBP24.78■■□□□ 1.56
SMARCAL1-208ENST00000434435 FGFR3P22607 806 aa24.78■■□□□ 1.56
SMARCAL1-208ENST00000434435 PBX2P40425 430 aa24.78■■□□□ 1.56
SMARCAL1-208ENST00000434435 LHX1P48742 406 aa24.78■■□□□ 1.56
SMARCAL1-208ENST00000434435 ADKP55263 362 aaKnown RBP24.78■■□□□ 1.56
SMARCAL1-208ENST00000434435 GSDMDP57764 484 aa24.78■■□□□ 1.56
SMARCAL1-208ENST00000434435 KRT17Q04695 432 aa24.78■■□□□ 1.56
SMARCAL1-208ENST00000434435 SFMBT2Q5VUG0 894 aa24.78■■□□□ 1.56
SMARCAL1-208ENST00000434435 TMEM270Q6UE05 265 aa24.78■■□□□ 1.56
SMARCAL1-208ENST00000434435 UNC93AQ86WB7 457 aa24.78■■□□□ 1.56
SMARCAL1-208ENST00000434435 RNF168Q8IYW5 571 aaPredicted RBP24.78■■□□□ 1.56
SMARCAL1-208ENST00000434435 RBBP8NLQ8NC74 664 aaPredicted RBP24.78■■□□□ 1.56
SMARCAL1-208ENST00000434435 HERC2P3Q9BVR0 1158 aa24.78■■□□□ 1.56
SMARCAL1-208ENST00000434435 DNAI2Q9GZS0 605 aa24.78■■□□□ 1.56
SMARCAL1-208ENST00000434435 CNTN6Q9UQ52 1028 aa24.78■■□□□ 1.56
SMARCAL1-208ENST00000434435 GABRDO14764 452 aa24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 GFPT2O94808 682 aa24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 ARHGEF15O94989 841 aa24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 EFEMP2O95967 443 aa24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 SOD2P04179 222 aa24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 GNL1P36915 607 aaPredicted RBP24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 NDST1P52848 882 aa24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 PLCB3Q01970 1234 aa24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 YWHAHQ04917 246 aaPredicted RBP24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 GOLGA8FQ08AF8 430 aa24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 GOLGA8DPQ0D2H9 430 aa24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 TSR1Q2NL82 804 aaKnown RBP24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 USP41Q3LFD5 358 aa24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 OVOS1Q6IE37 1185 aa24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 DDX53Q86TM3 631 aaKnown RBP24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 OSTM1Q86WC4 334 aa24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 CEP57Q86XR8 500 aa24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 FAM71AQ8IYT1 594 aa24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 KLHL23Q8NBE8 558 aa24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 OR8K1Q8NGG5 319 aa24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 TGS1Q96RS0 853 aaKnown RBP24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 C17orf80Q9BSJ5 609 aa24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 ABHD10Q9NUJ1 306 aa24.77■■□□□ 1.56
SMARCAL1-208ENST00000434435 A8MXQ7 604 aa24.76■■□□□ 1.55
SMARCAL1-208ENST00000434435 RB1P06400 928 aa24.76■■□□□ 1.55
SMARCAL1-208ENST00000434435 CCDC172P0C7W6 258 aa24.76■■□□□ 1.55
SMARCAL1-208ENST00000434435 FERP16591 822 aa24.76■■□□□ 1.55
SMARCAL1-208ENST00000434435 ARID5BQ14865 1188 aa24.76■■□□□ 1.55
SMARCAL1-208ENST00000434435 ASIC2Q16515 512 aa24.76■■□□□ 1.55
SMARCAL1-208ENST00000434435 THEM5Q8N1Q8 247 aa24.76■■□□□ 1.55
SMARCAL1-208ENST00000434435 TC2NQ8N9U0 490 aa24.76■■□□□ 1.55
SMARCAL1-208ENST00000434435 SYN2Q92777 582 aaPredicted RBP24.76■■□□□ 1.55
SMARCAL1-208ENST00000434435 DNAJC7Q99615 494 aa24.76■■□□□ 1.55
SMARCAL1-208ENST00000434435 TTPALQ9BTX7 342 aa24.76■■□□□ 1.55
SMARCAL1-208ENST00000434435 VN1R3Q9BXE9 311 aa24.76■■□□□ 1.55
SMARCAL1-208ENST00000434435 NT5C1AQ9BXI3 368 aa24.76■■□□□ 1.55
SMARCAL1-208ENST00000434435 NKX2-4Q9H2Z4 354 aa24.76■■□□□ 1.55
SMARCAL1-208ENST00000434435 DDX43Q9NXZ2 648 aaKnown RBP24.76■■□□□ 1.55
SMARCAL1-208ENST00000434435 HMGXB4Q9UGU5 601 aa24.76■■□□□ 1.55
SMARCAL1-208ENST00000434435 COL4A4P53420 1690 aaPredicted RBP24.75■■□□□ 1.55
SMARCAL1-208ENST00000434435 PTPRDP23468 1912 aa24.75■■□□□ 1.55
SMARCAL1-208ENST00000434435 A0A1W2PPC1 479 aa24.75■■□□□ 1.55
SMARCAL1-208ENST00000434435 C5orf67F2Z3F1 127 aa24.75■■□□□ 1.55
SMARCAL1-208ENST00000434435 PCSK1P29120 753 aa24.75■■□□□ 1.55
SMARCAL1-208ENST00000434435 ZNF132P52740 706 aa24.75■■□□□ 1.55
SMARCAL1-208ENST00000434435 ERVK-21P61565 698 aa24.75■■□□□ 1.55
SMARCAL1-208ENST00000434435 SMAD3P84022 425 aaKnown RBP24.75■■□□□ 1.55
SMARCAL1-208ENST00000434435 TAP1Q03518 808 aa24.75■■□□□ 1.55
SMARCAL1-208ENST00000434435 ZNF394Q53GI3 561 aa24.75■■□□□ 1.55
SMARCAL1-208ENST00000434435 VARS2Q5ST30 1063 aaKnown RBP24.75■■□□□ 1.55
SMARCAL1-208ENST00000434435 PPP2R2DQ66LE6 453 aa24.75■■□□□ 1.55
SMARCAL1-208ENST00000434435 WHAMMQ8TF30 809 aa24.75■■□□□ 1.55
SMARCAL1-208ENST00000434435 ZNHIT6Q9NWK9 470 aaKnown RBP24.75■■□□□ 1.55
SMARCAL1-208ENST00000434435 AIPL1Q9NZN9 384 aa24.75■■□□□ 1.55
SMARCAL1-208ENST00000434435 STXBP5LQ9Y2K9 1186 aa24.75■■□□□ 1.55
SMARCAL1-208ENST00000434435 ATG2AQ2TAZ0 1938 aa24.74■■□□□ 1.55
SMARCAL1-208ENST00000434435 RAD23BP54727 409 aa24.74■■□□□ 1.55
SMARCAL1-208ENST00000434435 ARID5AQ03989 594 aa24.74■■□□□ 1.55
SMARCAL1-208ENST00000434435 ZNF280DQ6N043 979 aa24.74■■□□□ 1.55
SMARCAL1-208ENST00000434435 KIAA1841Q6NSI8 718 aa24.74■■□□□ 1.55
SMARCAL1-208ENST00000434435 ANKS3Q6ZW76 656 aa24.74■■□□□ 1.55
SMARCAL1-208ENST00000434435 TAS1R1Q7RTX1 841 aa24.74■■□□□ 1.55
SMARCAL1-208ENST00000434435 CCDC186Q7Z3E2 898 aa24.74■■□□□ 1.55
SMARCAL1-208ENST00000434435 TMEM176AQ96HP8 235 aa24.74■■□□□ 1.55
SMARCAL1-208ENST00000434435 TWNKQ96RR1 684 aa24.74■■□□□ 1.55
SMARCAL1-208ENST00000434435 PPP1R9BQ96SB3 815 aa24.74■■□□□ 1.55
SMARCAL1-208ENST00000434435 C11orf84Q9BUA3 381 aaPredicted RBP24.74■■□□□ 1.55
SMARCAL1-208ENST00000434435 ELOVL4Q9GZR5 314 aa24.74■■□□□ 1.55
SMARCAL1-208ENST00000434435 PUF60Q9UHX1 559 aaKnown RBP24.74■■□□□ 1.55
SMARCAL1-208ENST00000434435 MTUS1Q9ULD2 1270 aa24.74■■□□□ 1.55
SMARCAL1-208ENST00000434435 LZTS1Q9Y250 596 aa24.74■■□□□ 1.55
SMARCAL1-208ENST00000434435 NME7Q9Y5B8 376 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms