RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 NR1D1P20393 614 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 EDNRBP24530 442 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 TBXAS1P24557 533 aaPredicted RBP7.94□□□□□ -1.14
COL17A1-204ENST00000433822 HSD17B3P37058 310 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 GMPSP49915 693 aaPredicted RBP7.94□□□□□ -1.14
COL17A1-204ENST00000433822 CDR1P51861 262 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 ACTR2P61160 394 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 DR1Q01658 176 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 HLTFQ14527 1009 aaKnown RBP eCLIP7.94□□□□□ -1.14
COL17A1-204ENST00000433822 MTFR1Q15390 333 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 SURF1Q15526 300 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 ARHGAP44Q17R89 818 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 CLEC16AQ2KHT3 1053 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 FAM153CQ494X1 144 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 HABP4Q5JVS0 413 aaKnown RBP7.94□□□□□ -1.14
COL17A1-204ENST00000433822 FAM102BQ5T8I3 360 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 SLC39A4Q6P5W5 647 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 B4GALNT4Q76KP1 1039 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 YTHDF3Q7Z739 585 aaKnown RBP7.94□□□□□ -1.14
COL17A1-204ENST00000433822 SYT9Q86SS6 491 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 NOP9Q86U38 636 aaKnown RBP7.94□□□□□ -1.14
COL17A1-204ENST00000433822 HOOK3Q86VS8 718 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 CBWD2Q8IUF1 395 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 ATP8B4Q8TF62 1192 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 PSPC1Q8WXF1 523 aaKnown RBP7.94□□□□□ -1.14
COL17A1-204ENST00000433822 IFT81Q8WYA0 676 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 RIN2Q8WYP3 895 aaPredicted RBP7.94□□□□□ -1.14
COL17A1-204ENST00000433822 ALG3Q92685 438 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 ARL8AQ96BM9 186 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 CEP170P1Q96L14 293 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 FMO2Q99518 471 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 DDX47Q9H0S4 455 aaKnown RBP7.94□□□□□ -1.14
COL17A1-204ENST00000433822 PORCNQ9H237 461 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 IKZF4Q9H2S9 585 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 PCIF1Q9H4Z3 704 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 LRRC19Q9H756 370 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 CNOT10Q9H9A5 744 aaKnown RBP7.94□□□□□ -1.14
COL17A1-204ENST00000433822 A1CFQ9NQ94 594 aaKnown RBP7.94□□□□□ -1.14
COL17A1-204ENST00000433822 HOMER3Q9NSC5 361 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 C1orf112Q9NSG2 853 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 ZDHHC18Q9NUE0 388 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 TAS2R14Q9NYV8 317 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 TMOD4Q9NZQ9 345 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.94□□□□□ -1.14
COL17A1-204ENST00000433822 GABBR1Q9UBS5 961 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 AMACRQ9UHK6 382 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 FAM153AQ9UHL3 310 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 FEZ2Q9UHY8 353 aaPredicted RBP7.94□□□□□ -1.14
COL17A1-204ENST00000433822 COG5Q9UP83 839 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 PLAAQ9Y263 795 aa7.94□□□□□ -1.14
COL17A1-204ENST00000433822 KIAA0100Q14667 2235 aaKnown RBP7.94□□□□□ -1.14
COL17A1-204ENST00000433822 CCDC169A6NNP5 214 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 ANKRD63C9JTQ0 380 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 NDC80O14777 642 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 FSCN2O14926 492 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 HNRNPDLO14979 420 aaKnown RBP7.93□□□□□ -1.14
COL17A1-204ENST00000433822 TTI1O43156 1089 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 SIN3BO75182 1162 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 LRRN2O75325 713 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 SGPL1O95470 568 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 CPP00450 1065 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 CYP1A1P04798 512 aaPredicted RBP7.93□□□□□ -1.14
COL17A1-204ENST00000433822 ABCB4P21439 1286 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 ARL2P36404 184 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 EFNA5P52803 228 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 RWDD2BP57060 319 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 PRKCEQ02156 737 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 CAV1Q03135 178 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 STRN3Q13033 797 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 SLMAPQ14BN4 828 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 STXBP2Q15833 593 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 UAP1Q16222 522 aaPredicted RBP7.93□□□□□ -1.14
COL17A1-204ENST00000433822 SNRNP48Q6IEG0 339 aaKnown RBP7.93□□□□□ -1.14
COL17A1-204ENST00000433822 KCNV1Q6PIU1 500 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 ZPBP2Q6X784 338 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 CEP128Q6ZU80 1094 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 PALB2Q86YC2 1186 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 JAMLQ86YT9 394 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 RIOX2Q8IUF8 465 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 PPM1KQ8N3J5 372 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 ZNF564Q8TBZ8 553 aaPredicted RBP7.93□□□□□ -1.14
COL17A1-204ENST00000433822 SLC20A1Q8WUM9 679 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 BSNDQ8WZ55 320 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 POMGNT1Q8WZA1 660 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 SEMA4DQ92854 862 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 CENPTQ96BT3 561 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 PGM2Q96G03 612 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 FAM167AQ96KS9 214 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 GDAP1L1Q96MZ0 367 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 WRNIP1Q96S55 665 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 CEP89Q96ST8 783 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 PCDHB18PQ96TA0 734 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 MDFIQ99750 246 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 FOXP3Q9BZS1 431 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 EPN3Q9H201 632 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 GOLPH3Q9H4A6 298 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 FAM124BQ9H5Z6 455 aaPredicted RBP7.93□□□□□ -1.14
COL17A1-204ENST00000433822 POLD4Q9HCU8 107 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 GPRC5CQ9NQ84 441 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 MTRF1LQ9UGC7 380 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms