RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 LRIG1Q96JA1 1093 aa4.34□□□□□ -1.71
CLK1-204ENST00000432425 MAP3K14Q99558 947 aa4.34□□□□□ -1.71
CLK1-204ENST00000432425 R3HDMLQ9H3Y0 253 aa4.34□□□□□ -1.71
CLK1-204ENST00000432425 PNPOQ9NVS9 261 aa4.34□□□□□ -1.71
CLK1-204ENST00000432425 SLC17A6Q9P2U8 582 aa4.34□□□□□ -1.71
CLK1-204ENST00000432425 A0A0B4J269 797 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 F5H697 171 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 H3BUI4 141 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 MGST3O14880 152 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 TRIAP1O43715 76 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 OFD1O75665 1012 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 SOAT2O75908 522 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 MATN4O95460 622 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 CHRM2P08172 466 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 CD38P28907 300 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 NDUFV1P49821 464 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 NXPH1P58417 271 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 TUBB3Q13509 450 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 AKNAD1Q5T1N1 836 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 SYCE2Q6PIF2 218 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 TSHZ1Q6ZSZ6 1077 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 TMPRSS9Q7Z410 1059 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 GRASPQ7Z6J2 395 aaPredicted RBP4.33□□□□□ -1.72
CLK1-204ENST00000432425 ARHGEF25Q86VW2 580 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 FAM9AQ8IZU1 332 aaPredicted RBP4.33□□□□□ -1.72
CLK1-204ENST00000432425 MYCBPAPQ8TBZ2 947 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 FBXO41Q8TF61 875 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 TFAP2BQ92481 460 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 TINAGL1Q9GZM7 467 aaPredicted RBP4.33□□□□□ -1.72
CLK1-204ENST00000432425 MRPL46Q9H2W6 279 aaKnown RBP4.33□□□□□ -1.72
CLK1-204ENST00000432425 PRDM13Q9H4Q3 707 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.33□□□□□ -1.72
CLK1-204ENST00000432425 ETAA1Q9NY74 926 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 DDX56Q9NY93 547 aaKnown RBP4.33□□□□□ -1.72
CLK1-204ENST00000432425 PCDHA1Q9Y5I3 950 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.33□□□□□ -1.72
CLK1-204ENST00000432425 COX11Q9Y6N1 276 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 SPATA31A3Q5VYP0 1347 aa4.33□□□□□ -1.72
CLK1-204ENST00000432425 E2F8A0AVK6 867 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 M0QYG6 137 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 VPS4BO75351 444 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 KIF20AO95235 890 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 PDGFRBP09619 1106 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 ITGALP20701 1170 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 LPOP22079 712 aaPredicted RBP4.32□□□□□ -1.72
CLK1-204ENST00000432425 FBLP22087 321 aaKnown RBP4.32□□□□□ -1.72
CLK1-204ENST00000432425 MAPK10P53779 464 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 PTPRRQ15256 657 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 TTF1Q15361 905 aaPredicted RBP4.32□□□□□ -1.72
CLK1-204ENST00000432425 IFIT1BQ5T764 474 aaKnown RBP4.32□□□□□ -1.72
CLK1-204ENST00000432425 KIAA0895LQ68EN5 471 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 PEG10Q86TG7 708 aaKnown RBP4.32□□□□□ -1.72
CLK1-204ENST00000432425 GRAMD1CQ8IYS0 662 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 PSD4Q8NDX1 1056 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 MTFMTQ96DP5 389 aaKnown RBP4.32□□□□□ -1.72
CLK1-204ENST00000432425 SPATA5L1Q9BVQ7 753 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 NR2E3Q9Y5X4 410 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 PRSS29PA6NIE9 313 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 C1RP00736 705 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 AHSGP02765 367 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 CHRM3P20309 590 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 GRIA3P42263 894 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 PIN1Q13526 163 aaPredicted RBP4.32□□□□□ -1.72
CLK1-204ENST00000432425 TAF2Q6P1X5 1199 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 USP37Q86T82 979 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 PPP1R3BQ86XI6 285 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 HPS3Q969F9 1004 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 CDK5RAP3Q96JB5 506 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 LRFN3Q9BTN0 628 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 TPSD1Q9BZJ3 242 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 ALG13Q9NP73 1137 aaKnown RBP4.32□□□□□ -1.72
CLK1-204ENST00000432425 SEMA4GQ9NTN9 838 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 AGAP1Q9UPQ3 857 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 RAD54BQ9Y620 910 aa4.32□□□□□ -1.72
CLK1-204ENST00000432425 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.31□□□□□ -1.72
CLK1-204ENST00000432425 ADM5C9JUS6 153 aa4.31□□□□□ -1.72
CLK1-204ENST00000432425 MASP2O00187 686 aa4.31□□□□□ -1.72
CLK1-204ENST00000432425 ABLIM3O94929 683 aa4.31□□□□□ -1.72
CLK1-204ENST00000432425 IGLV2-14P01704 120 aa4.31□□□□□ -1.72
CLK1-204ENST00000432425 IL12RB1P42701 662 aa4.31□□□□□ -1.72
CLK1-204ENST00000432425 MRPS21P82921 87 aaKnown RBP4.31□□□□□ -1.72
CLK1-204ENST00000432425 PLS1Q14651 629 aa4.31□□□□□ -1.72
CLK1-204ENST00000432425 TXNRD1Q16881 649 aa4.31□□□□□ -1.72
CLK1-204ENST00000432425 ZNF362Q5T0B9 420 aaPredicted RBP4.31□□□□□ -1.72
CLK1-204ENST00000432425 FAM98AQ8NCA5 519 aaKnown RBP4.31□□□□□ -1.72
CLK1-204ENST00000432425 SLC35A4Q96G79 324 aa4.31□□□□□ -1.72
CLK1-204ENST00000432425 UROC1Q96N76 676 aa4.31□□□□□ -1.72
CLK1-204ENST00000432425 OSBPL9Q96SU4 736 aa4.31□□□□□ -1.72
CLK1-204ENST00000432425 KLK15Q9H2R5 256 aa4.31□□□□□ -1.72
CLK1-204ENST00000432425 SMOC2Q9H3U7 446 aa4.31□□□□□ -1.72
CLK1-204ENST00000432425 WDR26Q9H7D7 661 aa4.31□□□□□ -1.72
CLK1-204ENST00000432425 SARS2Q9NP81 518 aaKnown RBP4.31□□□□□ -1.72
CLK1-204ENST00000432425 MRPS18AQ9NVS2 196 aaKnown RBP4.31□□□□□ -1.72
CLK1-204ENST00000432425 ASB6Q9NWX5 421 aa4.31□□□□□ -1.72
CLK1-204ENST00000432425 PNMA8BQ9ULN7 279 aaPredicted RBP4.31□□□□□ -1.72
CLK1-204ENST00000432425 STXBP5LQ9Y2K9 1186 aa4.31□□□□□ -1.72
CLK1-204ENST00000432425 HSPA6P17066 643 aa4.3□□□□□ -1.72
CLK1-204ENST00000432425 CD6P30203 668 aa4.3□□□□□ -1.72
CLK1-204ENST00000432425 KCNJ5P48544 419 aa4.3□□□□□ -1.72
CLK1-204ENST00000432425 NKX6-1P78426 367 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms