RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 RGMAQ96B86 450 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 RNF31Q96EP0 1072 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 PTCD3Q96EY7 689 aaKnown RBP2.72□□□□□ -1.97
CDC40-204ENST00000431461 RNPEPQ9H4A4 650 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 KCTD5Q9NXV2 234 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 KCNE5Q9UJ90 142 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 THRAP3Q9Y2W1 955 aaKnown RBP2.72□□□□□ -1.97
CDC40-204ENST00000431461 NEU2Q9Y3R4 380 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 IPPQ9Y573 584 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 PCDHGA9Q9Y5G4 932 aaKnown RBP2.72□□□□□ -1.97
CDC40-204ENST00000431461 PCDHGA8Q9Y5G5 932 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 PCDHGA7Q9Y5G6 932 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 PCDHGA6Q9Y5G7 932 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 PCDHGA3Q9Y5H0 932 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 ENTPD2Q9Y5L3 495 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 ATRNL1Q5VV63 1379 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 CCDC154A6NI56 674 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 FRS3O43559 492 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 CTNND1O60716 968 aaKnown RBP2.71□□□□□ -1.98
CDC40-204ENST00000431461 ERN1O75460 977 aaKnown RBP2.71□□□□□ -1.98
CDC40-204ENST00000431461 ZRANB2O95218 330 aaKnown RBP eCLIP2.71□□□□□ -1.98
CDC40-204ENST00000431461 PARNO95453 639 aaKnown RBP2.71□□□□□ -1.98
CDC40-204ENST00000431461 GPANK1O95872 356 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 CHEK2O96017 543 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 POMCP01189 267 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 FTLP02792 175 aaPredicted RBP2.71□□□□□ -1.98
CDC40-204ENST00000431461 KRT18P05783 430 aaKnown RBP2.71□□□□□ -1.98
CDC40-204ENST00000431461 PHKG2P15735 406 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 ATP5JP18859 108 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 DDCP20711 480 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 LPOP22079 712 aaPredicted RBP2.71□□□□□ -1.98
CDC40-204ENST00000431461 FGFR4P22455 802 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 ADSLP30566 484 aaPredicted RBP2.71□□□□□ -1.98
CDC40-204ENST00000431461 FOLR3P41439 243 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 VAV2P52735 878 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 CCT2P78371 535 aaKnown RBP2.71□□□□□ -1.98
CDC40-204ENST00000431461 SSBP2P81877 361 aaPredicted RBP2.71□□□□□ -1.98
CDC40-204ENST00000431461 SATB1Q01826 763 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 PPP3CAQ08209 521 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 HDAC1Q13547 482 aaPredicted RBP2.71□□□□□ -1.98
CDC40-204ENST00000431461 GBX1Q14549 363 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 EZH2Q15910 746 aaKnown RBP2.71□□□□□ -1.98
CDC40-204ENST00000431461 PABPC1LQ4VXU2 614 aaKnown RBP2.71□□□□□ -1.98
CDC40-204ENST00000431461 DAAM2Q86T65 1068 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 DGKHQ86XP1 1220 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 RHOT1Q8IXI2 618 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 TRMT2AQ8IZ69 625 aaKnown RBP2.71□□□□□ -1.98
CDC40-204ENST00000431461 PPM1NQ8N819 430 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 SLC35G2Q8TBE7 412 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 BRIX1Q8TDN6 353 aaKnown RBP2.71□□□□□ -1.98
CDC40-204ENST00000431461 HASPINQ8TF76 798 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 SUCLG2Q96I99 432 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 NELL2Q99435 816 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 ZSWIM1Q9BR11 485 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 RTFDC1Q9BY42 306 aaPredicted RBP2.71□□□□□ -1.98
CDC40-204ENST00000431461 C11orf54Q9H0W9 315 aaPredicted RBP2.71□□□□□ -1.98
CDC40-204ENST00000431461 TMEM60Q9H2L4 133 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 UNKLQ9H9P5 680 aaKnown RBP2.71□□□□□ -1.98
CDC40-204ENST00000431461 CPNE5Q9HCH3 593 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 CFAP97Q9P2B7 532 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 TUBD1Q9UJT1 453 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 ZDHHC8Q9ULC8 765 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 STXBP5LQ9Y2K9 1186 aa2.71□□□□□ -1.98
CDC40-204ENST00000431461 MYBBP1AQ9BQG0 1328 aaKnown RBP2.7□□□□□ -1.98
CDC40-204ENST00000431461 CCDC78A2IDD5 438 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 CCDC151A5D8V7 595 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 MGEA5O60502 916 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 SOAT2O75908 522 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 HAUS5O94927 633 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 GNAI2P04899 355 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 MYL1P05976 194 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 ALOX15P16050 662 aaPredicted RBP2.7□□□□□ -1.98
CDC40-204ENST00000431461 HK3P52790 923 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 SOX10P56693 466 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 FAM193AP78312 1265 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 PIGFQ07326 219 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 NOGQ13253 232 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 MTM1Q13496 603 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 FGL2Q14314 439 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 ODF1Q14990 250 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 ANO6Q4KMQ2 910 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 ARHGAP29Q52LW3 1261 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 SLC44A4Q53GD3 710 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 C11orf87Q6NUJ2 197 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 FOXR2Q6PJQ5 311 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 NOL8Q76FK4 1167 aaKnown RBP2.7□□□□□ -1.98
CDC40-204ENST00000431461 EPM2AIP1Q7L775 607 aaPredicted RBP2.7□□□□□ -1.98
CDC40-204ENST00000431461 PDSS2Q86YH6 399 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 WDR75Q8IWA0 830 aaKnown RBP2.7□□□□□ -1.98
CDC40-204ENST00000431461 COLGALT2Q8IYK4 626 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 GRAMD1CQ8IYS0 662 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 REPS2Q8NFH8 660 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 DIS3LQ8TF46 1054 aaKnown RBP2.7□□□□□ -1.98
CDC40-204ENST00000431461 DPF1Q92782 380 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 SARAFQ96BY9 339 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 RUNDC1Q96C34 613 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 ZC3H10Q96K80 434 aaKnown RBP2.7□□□□□ -1.98
CDC40-204ENST00000431461 CLPTM1LQ96KA5 538 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 MOGAT1Q96PD6 335 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 MED15Q96RN5 788 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms