RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TLR10Q9BXR5 811 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 DHX36Q9H2U1 1008 aaKnown RBP3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 SLAMF7Q9NQ25 335 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 NECTIN3Q9NQS3 549 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 XPR1Q9UBH6 696 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 DGKBQ9Y6T7 804 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 CCDC78A2IDD5 438 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 GRXCR1A8MXD5 290 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 PRR5-ARHGAP8B1AHC4 643 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 SYT5O00445 386 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 NPC1O15118 1278 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 GPR42O15529 346 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 FFAR2O15552 330 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 CCP110O43303 1012 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 THAP12O43422 761 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 FOXS1O43638 330 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 IPO13O94829 963 aaKnown RBP3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 CSTBP04080 98 aaKnown RBP3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 MYL4P12829 197 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 BTF3P20290 206 aaKnown RBP3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 PAX3P23760 479 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 MGAT1P26572 445 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 CFPP27918 469 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 CHKAP35790 457 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 BLMHQ13867 455 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 TRIM14Q14142 442 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 NPY5RQ15761 445 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 TBC1D10BQ4KMP7 808 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 SLC44A4Q53GD3 710 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 XP32Q5T750 250 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 TCTN3Q6NUS6 607 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 CCDC174Q6PII3 467 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 ZDHHC24Q6UX98 284 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 MAMDC4Q6UXC1 1216 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 Q6ZSN1 163 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 RHOT2Q8IXI1 618 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 ELOA2Q8IYF1 753 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 CFAP52Q8N1V2 620 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 SDR16C5Q8N3Y7 309 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 AOPEPQ8N6M6 819 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 SYT8Q8NBV8 401 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 POC1BQ8TC44 478 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 SPSB4Q96A44 273 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 GNRHR2Q96P88 292 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 LRRC37BQ96QE4 947 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 CPPED1Q9BRF8 314 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 CNPPD1Q9BV87 410 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 TMEM120AQ9BXJ8 343 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 SIK2Q9H0K1 926 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 C12orf65Q9H3J6 166 aaKnown RBP3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 CASS4Q9NQ75 786 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 SAGE1Q9NXZ1 904 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 CTTNBP2NLQ9P2B4 639 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 DKK4Q9UBT3 224 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 MAN2B2Q9Y2E5 1009 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 CHST2Q9Y4C5 530 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 PCDHGB3Q9Y5G1 929 aa3.8□□□□□ -1.8
HMGB1P27-201ENST00000431429 PATE3B3GLJ2 98 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 M0QYG6 137 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 KIF20AO95235 890 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 PLATP00750 562 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 ITGB1P05556 798 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 C8AP07357 584 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 ITGA5P08648 1049 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 CYP2C9P11712 490 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 CKBP12277 381 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 GNAT2P19087 354 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 IL1R2P27930 398 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 SERPINF1P36955 418 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 CHN2P52757 468 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 COPAP53621 1224 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 MAPK10P53779 464 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 JAG1P78504 1218 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 MXRA7P84157 204 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 PTK2BQ14289 1009 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 ELAVL1Q15717 326 aaKnown RBP3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 ELF2Q15723 593 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 PDCD2Q16342 344 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 ZACNQ401N2 412 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 HSP90AB4PQ58FF6 505 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 TANGO2Q6ICL3 276 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 EFCAB12Q6NXP0 572 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 PGBD2Q6P3X8 592 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 USP17L6PQ6QN14 398 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 LRRC55Q6ZSA7 311 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 MED25Q71SY5 747 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 POLNQ7Z5Q5 900 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 SLC15A4Q8N697 577 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 ZNF527Q8NB42 609 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 SPATA5Q8NB90 893 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 GLIS1Q8NBF1 620 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 FAM46DQ8NEK8 389 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 TBC1D15Q8TC07 691 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 ZNF566Q969W8 418 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 MIEF2Q96C03 454 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 RBM15Q96T37 977 aaKnown RBP eCLIP3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 RMDN3Q96TC7 470 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 HEPHQ9BQS7 1158 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 MAF1Q9H063 256 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms