RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 USTQ9Y2C2 406 aa18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 ARIH1Q9Y4X5 557 aaPredicted RBP18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 SNX9Q9Y5X1 595 aa18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 MTCL1Q9Y4B5 1905 aaKnown RBP18.67■□□□□ 0.58
CTDSP1-203ENST00000431127 CST3P01034 146 aaPredicted RBP18.67■□□□□ 0.58
CTDSP1-203ENST00000431127 ATICP31939 592 aa18.67■□□□□ 0.58
CTDSP1-203ENST00000431127 VAMP7P51809 220 aa18.67■□□□□ 0.58
CTDSP1-203ENST00000431127 FKBP3Q00688 224 aaKnown RBP18.67■□□□□ 0.58
CTDSP1-203ENST00000431127 ADCY1Q08828 1119 aa18.67■□□□□ 0.58
CTDSP1-203ENST00000431127 BIRC3Q13489 604 aa18.67■□□□□ 0.58
CTDSP1-203ENST00000431127 MORC3Q14149 939 aa18.67■□□□□ 0.58
CTDSP1-203ENST00000431127 CAMK4Q16566 473 aa18.67■□□□□ 0.58
CTDSP1-203ENST00000431127 RNF19BQ6ZMZ0 732 aa18.67■□□□□ 0.58
CTDSP1-203ENST00000431127 PDCL2Q8N4E4 241 aa18.67■□□□□ 0.58
CTDSP1-203ENST00000431127 PLEKHO2Q8TD55 490 aa18.67■□□□□ 0.58
CTDSP1-203ENST00000431127 SYAP1Q96A49 352 aaPredicted RBP18.67■□□□□ 0.58
CTDSP1-203ENST00000431127 KIAA1468Q9P260 1216 aa18.67■□□□□ 0.58
CTDSP1-203ENST00000431127 BIN1O00499 593 aa18.66■□□□□ 0.58
CTDSP1-203ENST00000431127 STAU1O95793 577 aaKnown RBP18.66■□□□□ 0.58
CTDSP1-203ENST00000431127 LRG1P02750 347 aa18.66■□□□□ 0.58
CTDSP1-203ENST00000431127 EPB41P11171 864 aaKnown RBP18.66■□□□□ 0.58
CTDSP1-203ENST00000431127 CCNE1P24864 410 aa18.66■□□□□ 0.58
CTDSP1-203ENST00000431127 LHX1P48742 406 aa18.66■□□□□ 0.58
CTDSP1-203ENST00000431127 ANKRD40Q6AI12 368 aa18.66■□□□□ 0.58
CTDSP1-203ENST00000431127 SCARA3Q6AZY7 606 aa18.66■□□□□ 0.58
CTDSP1-203ENST00000431127 OTOP3Q7RTS5 596 aa18.66■□□□□ 0.58
CTDSP1-203ENST00000431127 ACSF2Q96CM8 615 aaPredicted RBP18.66■□□□□ 0.58
CTDSP1-203ENST00000431127 ZCWPW1Q9H0M4 648 aa18.66■□□□□ 0.58
CTDSP1-203ENST00000431127 LMBRD1Q9NUN5 540 aa18.66■□□□□ 0.58
CTDSP1-203ENST00000431127 L1RE1Q9UN81 338 aa18.66■□□□□ 0.58
CTDSP1-203ENST00000431127 BICDL2A1A5D9 508 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 SLC16A3O15427 465 aaKnown RBP18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 CCL16O15467 120 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 C4BPAP04003 597 aaKnown RBP18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 FAM163BP0C2L3 166 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 OR4Q2P0C623 313 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 ALADP13716 330 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 PLA2G5P39877 138 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 DLG4P78352 724 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 MYL7Q01449 175 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 TSPY1Q01534 308 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 SOWAHAQ2M3V2 549 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 ZACNQ401N2 412 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 TDRD10Q5VZ19 366 aaKnown RBP18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 FOXR2Q6PJQ5 311 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 DCP1BQ8IZD4 617 aaKnown RBP18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 ADGRF2Q8IZF7 708 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 PLCD3Q8N3E9 789 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 TDRD5Q8NAT2 981 aaKnown RBP18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 OR10T2Q8NGX3 314 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 C2orf15Q8WU43 125 aaKnown RBP18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 FAM122AQ96E09 287 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 MMS19Q96T76 1030 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 RTP3Q9BQQ7 232 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 ACBD6Q9BR61 282 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 CLSTN2Q9H4D0 955 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 HSFX1Q9UBD0 423 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 POLIQ9UNA4 740 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 INSL5Q9Y5Q6 135 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 CLUHO75153 1309 aa18.65■□□□□ 0.58
CTDSP1-203ENST00000431127 FAM86C2PA6NEL3 165 aa18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 STX10O60499 249 aa18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 SEC24AO95486 1093 aa18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 BMP6P22004 513 aa18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 PCSK1P29120 753 aa18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 GTF2H1P32780 548 aa18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 PMS1P54277 932 aaKnown RBP18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 MCCD1P59942 119 aaPredicted RBP18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 MYL6P60660 151 aa18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 TNNC1P63316 161 aa18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 NCOA4Q13772 614 aa18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 WDR72Q3MJ13 1102 aa18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 SV2AQ7L0J3 742 aa18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 LIMS2Q7Z4I7 341 aa18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 ZC3H3Q8IXZ2 948 aaKnown RBP18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 ELMOD1Q8N336 334 aa18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 FEZF2Q8TBJ5 459 aa18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 PGLYRP2Q96PD5 576 aa18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 VRTNQ9H8Y1 702 aa18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 DDX43Q9NXZ2 648 aaKnown RBP18.64■□□□□ 0.57
CTDSP1-203ENST00000431127 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.64■□□□□ 0.571e-10■□□□□ 9.2
CTDSP1-203ENST00000431127 MTMR11A4FU01 709 aa18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 PPP1R3GB7ZBB8 358 aa18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 GABRDO14764 452 aa18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 CD44P16070 742 aaKnown RBP18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 DUSP4Q13115 394 aa18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 PLD1Q13393 1074 aa18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 SGSM1Q2NKQ1 1148 aa18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 ZNF699Q32M78 642 aa18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 SLC39A12Q504Y0 691 aa18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 KLHL10Q6JEL2 608 aa18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 GRASPQ7Z6J2 395 aaPredicted RBP18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 RNF135Q8IUD6 432 aa18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 ZDHHC14Q8IZN3 488 aa18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 NELFBQ8WX92 580 aa18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 TAF4BQ92750 862 aa18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 EEF2KMTQ96G04 330 aa18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 CEP63Q96MT8 703 aa18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 TMEM209Q96SK2 561 aa18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 XYLT2Q9H1B5 865 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms