RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 NMRK1Q9NWW6 199 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 CYB5R1Q9UHQ9 305 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 ADGRE2Q9UHX3 823 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 PCDHGA8Q9Y5G5 932 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 RSF1Q96T23 1441 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 DPPA5A6NC42 116 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 GADD45BO75293 160 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 PRAMEF12O95522 483 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 CYP1A1P04798 512 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 PSMC2P35998 433 aaKnown RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 STAT1P42224 750 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 CCR4P51679 360 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 SKP1P63208 163 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 GNGT1P63211 74 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 STILQ15468 1287 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 ANKRD39Q53RE8 183 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 C1orf146Q5VVC0 180 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 VASH1Q7L8A9 365 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 ZNF598Q86UK7 904 aaKnown RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 OR8H3Q8N146 312 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 C7orf31Q8N865 590 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 Q8NFD4 153 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 OR7G1Q8NGA0 311 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 OR56B2PQ8NGI1 322 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 PRCCQ92733 491 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 TMIGD2Q96BF3 282 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 ZSCAN5AQ9BUG6 496 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 RIBC2Q9H4K1 309 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 SLC39A1Q9NY26 324 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 WWOXQ9NZC7 414 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 EPS15L1Q9UBC2 864 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 DDX25Q9UHL0 483 aaKnown RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 TLK1Q9UKI8 766 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 MYO3BQ8WXR4 1341 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 ATAD2Q6PL18 1390 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 PPEF2O14830 753 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 GREM1O60565 184 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 PPP6R2O75170 966 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 ATP5JP18859 108 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 IL10P22301 178 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 HLA-FP30511 346 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 GATMP50440 423 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 KIF23Q02241 960 aaPredicted RBP5.62□□□□□ -1.51
PTPN4-203ENST00000430976 GUCY2DQ02846 1103 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 ODF1Q14990 250 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 RRS1Q15050 365 aaKnown RBP5.62□□□□□ -1.51
PTPN4-203ENST00000430976 CCDC6Q16204 474 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 IFIT1BQ5T764 474 aaKnown RBP5.62□□□□□ -1.51
PTPN4-203ENST00000430976 SCUBE3Q8IX30 993 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 UBL4BQ8N7F7 174 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 DNAAF3Q8N9W5 541 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 ASB16Q96NS5 453 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 COPS4Q9BT78 406 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 SH2B1Q9NRF2 756 aaPredicted RBP5.62□□□□□ -1.51
PTPN4-203ENST00000430976 INTS10Q9NVR2 710 aaKnown RBP5.62□□□□□ -1.51
PTPN4-203ENST00000430976 LRFN1Q9P244 771 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 SLAIN2Q9P270 581 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 AP4E1Q9UPM8 1137 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 TTC21BQ7Z4L5 1316 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 C1orf232A0A0U1RR37 186 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 KANSL1LA0AUZ9 987 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 NUPL2O15504 423 aaKnown RBP5.62□□□□□ -1.51
PTPN4-203ENST00000430976 CLOCKO15516 846 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 GJB3O75712 270 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 BCAR3O75815 825 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 CCNDBP1O95273 360 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 AXLP30530 894 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 SSTR3P32745 418 aaPredicted RBP5.62□□□□□ -1.51
PTPN4-203ENST00000430976 MAPKAPK2P49137 400 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 NRLP54845 237 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 AMPD2Q01433 879 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 CENPCQ03188 943 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 PUDPQ08623 228 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 STK4Q13043 487 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 FIGNQ5HY92 759 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 WLSQ5T9L3 541 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.62□□□□□ -1.51
PTPN4-203ENST00000430976 NAXEQ8NCW5 288 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 CHMP6Q96FZ7 201 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 PPP1R13BQ96KQ4 1090 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 ZNF285Q96NJ3 590 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 ADPGKQ9BRR6 497 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 INTS2Q9H0H0 1204 aaKnown RBP5.62□□□□□ -1.51
PTPN4-203ENST00000430976 KLHL25Q9H0H3 589 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 SUGCTQ9HAC7 445 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 MAGEF1Q9HAY2 307 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 MLXQ9UH92 298 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 HPS5Q9UPZ3 1129 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 DNM3Q9UQ16 869 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 CAB39Q9Y376 341 aaPredicted RBP5.62□□□□□ -1.51
PTPN4-203ENST00000430976 SNX14Q9Y5W7 946 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 KRT37O76014 449 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 POP4O95707 220 aaKnown RBP5.62□□□□□ -1.51
PTPN4-203ENST00000430976 HNMTP50135 292 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 RAP1GDS1P52306 607 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 ALDH18A1P54886 795 aaKnown RBP5.62□□□□□ -1.51
PTPN4-203ENST00000430976 CYP4F3Q08477 520 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 UAP1L1Q3KQV9 507 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 PLEKHG4Q58EX7 1191 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 DGKKQ5KSL6 1271 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms