RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 SCLYQ96I15 445 aa12.14□□□□□ -0.47
CECR3-201ENST00000428828 TSG101Q99816 390 aa12.14□□□□□ -0.47
CECR3-201ENST00000428828 NOC4LQ9BVI4 516 aaKnown RBP12.14□□□□□ -0.47
CECR3-201ENST00000428828 MRPL4Q9BYD3 311 aaKnown RBP12.14□□□□□ -0.47
CECR3-201ENST00000428828 CCDC134Q9H6E4 229 aa12.14□□□□□ -0.47
CECR3-201ENST00000428828 PRMT7Q9NVM4 692 aaPredicted RBP12.14□□□□□ -0.47
CECR3-201ENST00000428828 BLOC1S6Q9UL45 172 aa12.14□□□□□ -0.47
CECR3-201ENST00000428828 LTBP2Q14767 1821 aa12.14□□□□□ -0.47
CECR3-201ENST00000428828 LGALS16A8MUM7 142 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 TGFB1I1O43294 461 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 TSPAN1O60635 241 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 SELPP16109 830 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 CD52P31358 61 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 NFX1Q12986 1120 aaKnown RBP12.13□□□□□ -0.47
CECR3-201ENST00000428828 CFAP221Q4G0U5 840 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 FIGNQ5HY92 759 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 FBXO47Q5MNV8 452 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 ERMARDQ5T6L9 678 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 SLC39A4Q6P5W5 647 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 ZBTB33Q86T24 672 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 TEKT4Q8WW24 435 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 ZBTB45Q96K62 511 aaPredicted RBP12.13□□□□□ -0.47
CECR3-201ENST00000428828 LACRTQ9GZZ8 138 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 FZD8Q9H461 694 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 PCIF1Q9H4Z3 704 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 TYW1Q9NV66 732 aaKnown RBP12.13□□□□□ -0.47
CECR3-201ENST00000428828 PIN4Q9Y237 131 aaKnown RBP12.13□□□□□ -0.47
CECR3-201ENST00000428828 PLAAQ9Y263 795 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 L3MBTL1Q9Y468 752 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 MICAL3Q7RTP6 2002 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 CNTNAP2Q9UHC6 1331 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 BICDL2A1A5D9 508 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 ACKR2O00590 384 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 CALUO43852 315 aaPredicted RBP12.13□□□□□ -0.47
CECR3-201ENST00000428828 LCA5LO95447 670 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 CLTAP09496 248 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 ARF4P18085 180 aaPredicted RBP12.13□□□□□ -0.47
CECR3-201ENST00000428828 ABCD1P33897 745 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 CARSP49589 748 aaKnown RBP12.13□□□□□ -0.47
CECR3-201ENST00000428828 CYP2J2P51589 502 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 CUL1Q13616 776 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 LPIN1Q14693 890 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 MBTPS1Q14703 1052 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 AMHR2Q16671 573 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 ATF7IP2Q5U623 682 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 CENPPQ6IPU0 288 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 TRAF7Q6Q0C0 670 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 HS2ST1Q7LGA3 356 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 C7orf61Q8IZ16 206 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 LZICQ8WZA0 190 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 TCHPQ9BT92 498 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 FAM129AQ9BZQ8 928 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 AGO3Q9H9G7 860 aaKnown RBP12.13□□□□□ -0.47
CECR3-201ENST00000428828 AGPAT3Q9NRZ7 376 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 TBX21Q9UL17 535 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 NFU1Q9UMS0 254 aa12.13□□□□□ -0.47
CECR3-201ENST00000428828 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.13□□□□□ -0.47
CECR3-201ENST00000428828 A0A1W2PQJ5 194 aa12.12□□□□□ -0.47
CECR3-201ENST00000428828 DPPA5A6NC42 116 aa12.12□□□□□ -0.47
CECR3-201ENST00000428828 BHMG1C9JSJ3 638 aaPredicted RBP12.12□□□□□ -0.47
CECR3-201ENST00000428828 PITPNM1O00562 1244 aa12.12□□□□□ -0.47
CECR3-201ENST00000428828 PDXKO00764 312 aa12.12□□□□□ -0.47
CECR3-201ENST00000428828 GSTA2P09210 222 aa12.12□□□□□ -0.47
CECR3-201ENST00000428828 HNRNPH3P31942 346 aaKnown RBP12.12□□□□□ -0.47
CECR3-201ENST00000428828 SH3BGRP55822 239 aaPredicted RBP12.12□□□□□ -0.47
CECR3-201ENST00000428828 MXRA7P84157 204 aa12.12□□□□□ -0.47
CECR3-201ENST00000428828 SLC7A5Q01650 507 aa12.12□□□□□ -0.47
CECR3-201ENST00000428828 ZNF568Q3ZCX4 644 aa12.12□□□□□ -0.47
CECR3-201ENST00000428828 FAM26DQ5JW98 314 aa12.12□□□□□ -0.47
CECR3-201ENST00000428828 TTI2Q6NXR4 508 aa12.12□□□□□ -0.47
CECR3-201ENST00000428828 POMGNT1Q8WZA1 660 aa12.12□□□□□ -0.47
CECR3-201ENST00000428828 ZNF317Q96PQ6 595 aaPredicted RBP12.12□□□□□ -0.47
CECR3-201ENST00000428828 ACO2Q99798 780 aaKnown RBP12.12□□□□□ -0.47
CECR3-201ENST00000428828 CBWD1Q9BRT8 395 aa12.12□□□□□ -0.47
CECR3-201ENST00000428828 TTYH3Q9C0H2 523 aa12.12□□□□□ -0.47
CECR3-201ENST00000428828 WNT8AQ9H1J5 351 aa12.12□□□□□ -0.47
CECR3-201ENST00000428828 ST3GAL5Q9UNP4 418 aa12.12□□□□□ -0.47
CECR3-201ENST00000428828 PDCD11Q14690 1871 aaKnown RBP12.12□□□□□ -0.47
CECR3-201ENST00000428828 RALGAPA2Q2PPJ7 1873 aa12.12□□□□□ -0.47
CECR3-201ENST00000428828 RCCD1A6NED2 376 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 KCNJ18B7U540 433 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 HEXIM1O94992 359 aaKnown RBP12.11□□□□□ -0.47
CECR3-201ENST00000428828 NR3C1P04150 777 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 GLI1P08151 1106 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 FAM153BP0C7A2 387 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 NR2F2P24468 414 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 EEF1GP26641 437 aaKnown RBP12.11□□□□□ -0.47
CECR3-201ENST00000428828 SKIV2L2P42285 1042 aaKnown RBP12.11□□□□□ -0.47
CECR3-201ENST00000428828 ZBED6P86452 979 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 LRRC63Q05C16 580 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 KCNJ12Q14500 433 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 FAM187BQ17R55 369 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 FAM153CQ494X1 144 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 GALNTL6Q49A17 601 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 ZCWPW2Q504Y3 356 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 EEF1DP3Q658K8 133 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 PPP4R3CPQ6ZMV5 832 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 TSHZ1Q6ZSZ6 1077 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 TRPM8Q7Z2W7 1104 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 DEFB128Q7Z7B8 93 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms