RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 MRPS17Q9Y2R5 130 aaKnown RBP18.46■□□□□ 0.55
TRIM39-209ENST00000428728 F5P12259 2224 aa18.46■□□□□ 0.55
TRIM39-209ENST00000428728 SHISA7A6NL88 538 aa18.45■□□□□ 0.54
TRIM39-209ENST00000428728 HEPACAM2A8MVW5 462 aa18.45■□□□□ 0.54
TRIM39-209ENST00000428728 K7ELQ4 463 aaPredicted RBP18.45■□□□□ 0.54
TRIM39-209ENST00000428728 STX6O43752 255 aa18.45■□□□□ 0.54
TRIM39-209ENST00000428728 IL18RAPO95256 599 aa18.45■□□□□ 0.54
TRIM39-209ENST00000428728 PAX3P23760 479 aa18.45■□□□□ 0.54
TRIM39-209ENST00000428728 MAGEA9P43362 315 aa18.45■□□□□ 0.54
TRIM39-209ENST00000428728 WNT7BP56706 349 aa18.45■□□□□ 0.54
TRIM39-209ENST00000428728 SLC39A14Q15043 492 aa18.45■□□□□ 0.54
TRIM39-209ENST00000428728 MGAT5BQ3V5L5 792 aa18.45■□□□□ 0.54
TRIM39-209ENST00000428728 SV2CQ496J9 727 aa18.45■□□□□ 0.54
TRIM39-209ENST00000428728 WSCD1Q658N2 575 aa18.45■□□□□ 0.54
TRIM39-209ENST00000428728 GPIHBP1Q8IV16 184 aa18.45■□□□□ 0.54
TRIM39-209ENST00000428728 SYCP3Q8IZU3 236 aa18.45■□□□□ 0.54
TRIM39-209ENST00000428728 ZNF560Q96MR9 790 aa18.45■□□□□ 0.54
TRIM39-209ENST00000428728 HINFPQ9BQA5 517 aa18.45■□□□□ 0.54
TRIM39-209ENST00000428728 LPIN3Q9BQK8 851 aa18.45■□□□□ 0.54
TRIM39-209ENST00000428728 STRA6Q9BX79 667 aa18.45■□□□□ 0.54
TRIM39-209ENST00000428728 ZCWPW1Q9H0M4 648 aa18.45■□□□□ 0.54
TRIM39-209ENST00000428728 SEMA4AQ9H3S1 761 aa18.45■□□□□ 0.54
TRIM39-209ENST00000428728 GOLGA8IPA6NC78 632 aa18.44■□□□□ 0.54
TRIM39-209ENST00000428728 GOLGA8JA6NMD2 632 aa18.44■□□□□ 0.54
TRIM39-209ENST00000428728 ZNF263O14978 683 aa18.44■□□□□ 0.54
TRIM39-209ENST00000428728 NCAM2O15394 837 aa18.44■□□□□ 0.54
TRIM39-209ENST00000428728 GABRR2P28476 465 aa18.44■□□□□ 0.54
TRIM39-209ENST00000428728 TFAMQ00059 246 aaKnown RBP18.44■□□□□ 0.54
TRIM39-209ENST00000428728 CSTF1Q05048 431 aaKnown RBP18.44■□□□□ 0.54
TRIM39-209ENST00000428728 STK38Q15208 465 aa18.44■□□□□ 0.54
TRIM39-209ENST00000428728 GAREM2Q75VX8 874 aa18.44■□□□□ 0.54
TRIM39-209ENST00000428728 DNAJB7Q7Z6W7 309 aaPredicted RBP18.44■□□□□ 0.54
TRIM39-209ENST00000428728 BRSK2Q8IWQ3 736 aa18.44■□□□□ 0.54
TRIM39-209ENST00000428728 PSMG2Q969U7 264 aa18.44■□□□□ 0.54
TRIM39-209ENST00000428728 CLDN23Q96B33 292 aa18.44■□□□□ 0.54
TRIM39-209ENST00000428728 RSPRY1Q96DX4 576 aa18.44■□□□□ 0.54
TRIM39-209ENST00000428728 FAM84AQ96KN4 292 aa18.44■□□□□ 0.54
TRIM39-209ENST00000428728 NELL2Q99435 816 aa18.44■□□□□ 0.54
TRIM39-209ENST00000428728 GPR88Q9GZN0 384 aa18.44■□□□□ 0.54
TRIM39-209ENST00000428728 ZSCAN16Q9H4T2 348 aaPredicted RBP18.44■□□□□ 0.54
TRIM39-209ENST00000428728 TRPV4Q9HBA0 871 aa18.44■□□□□ 0.54
TRIM39-209ENST00000428728 OLFML3Q9NRN5 406 aa18.44■□□□□ 0.54
TRIM39-209ENST00000428728 PANK4Q9NVE7 773 aa18.44■□□□□ 0.54
TRIM39-209ENST00000428728 ABI2Q9NYB9 513 aaPredicted RBP18.44■□□□□ 0.54
TRIM39-209ENST00000428728 ASB3Q9Y575 518 aa18.44■□□□□ 0.54
TRIM39-209ENST00000428728 PIAS3Q9Y6X2 628 aa18.44■□□□□ 0.54
TRIM39-209ENST00000428728 ATF6P18850 670 aa18.43■□□□□ 0.54
TRIM39-209ENST00000428728 POLR2BP30876 1174 aaKnown RBP18.43■□□□□ 0.54
TRIM39-209ENST00000428728 VEPH1Q14D04 833 aa18.43■□□□□ 0.54
TRIM39-209ENST00000428728 GPR158Q5T848 1215 aa18.43■□□□□ 0.54
TRIM39-209ENST00000428728 ITIH5Q86UX2 942 aa18.43■□□□□ 0.54
TRIM39-209ENST00000428728 NT5DC4Q86YG4 428 aa18.43■□□□□ 0.54
TRIM39-209ENST00000428728 MFSD6LQ8IWD5 586 aa18.43■□□□□ 0.54
TRIM39-209ENST00000428728 YAF2Q8IY57 180 aa18.43■□□□□ 0.54
TRIM39-209ENST00000428728 THEM5Q8N1Q8 247 aa18.43■□□□□ 0.54
TRIM39-209ENST00000428728 CBWD1Q9BRT8 395 aa18.43■□□□□ 0.54
TRIM39-209ENST00000428728 BACH2Q9BYV9 841 aa18.43■□□□□ 0.54
TRIM39-209ENST00000428728 ATXN3LQ9H3M9 355 aa18.43■□□□□ 0.54
TRIM39-209ENST00000428728 RBAKQ9NYW8 714 aaPredicted RBP18.43■□□□□ 0.54
TRIM39-209ENST00000428728 FBXO4Q9UKT5 387 aa18.43■□□□□ 0.54
TRIM39-209ENST00000428728 PCDHB13Q9Y5F0 798 aa18.43■□□□□ 0.54
TRIM39-209ENST00000428728 GREB1Q4ZG55 1949 aa18.43■□□□□ 0.54
TRIM39-209ENST00000428728 ANAPC1Q9H1A4 1944 aa18.43■□□□□ 0.54
TRIM39-209ENST00000428728 GVINP1Q7Z2Y8 2422 aa18.42■□□□□ 0.54
TRIM39-209ENST00000428728 FRMD3A2A2Y4 597 aa18.42■□□□□ 0.54
TRIM39-209ENST00000428728 KPNA7A9QM74 516 aa18.42■□□□□ 0.54
TRIM39-209ENST00000428728 MAN2B1O00754 1011 aa18.42■□□□□ 0.54
TRIM39-209ENST00000428728 KINO60870 393 aaKnown RBP18.42■□□□□ 0.54
TRIM39-209ENST00000428728 PRPF6O94906 941 aaKnown RBP18.42■□□□□ 0.54
TRIM39-209ENST00000428728 ITGB3P05106 788 aa18.42■□□□□ 0.54
TRIM39-209ENST00000428728 RPS9P46781 194 aaKnown RBP18.42■□□□□ 0.54
TRIM39-209ENST00000428728 NASPP49321 788 aaPredicted RBP18.42■□□□□ 0.54
TRIM39-209ENST00000428728 CYP4F8P98187 520 aa18.42■□□□□ 0.54
TRIM39-209ENST00000428728 POU5F1Q01860 360 aaKnown RBP18.42■□□□□ 0.54
TRIM39-209ENST00000428728 BFSP1Q12934 665 aa18.42■□□□□ 0.54
TRIM39-209ENST00000428728 ALCAMQ13740 583 aa18.42■□□□□ 0.54
TRIM39-209ENST00000428728 ARHGAP15Q53QZ3 475 aa18.42■□□□□ 0.54
TRIM39-209ENST00000428728 TSSK4Q6SA08 328 aa18.42■□□□□ 0.54
TRIM39-209ENST00000428728 ARID3BQ8IVW6 561 aaPredicted RBP18.42■□□□□ 0.54
TRIM39-209ENST00000428728 CSGALNACT1Q8TDX6 532 aa18.42■□□□□ 0.54
TRIM39-209ENST00000428728 GIPC2Q8TF65 315 aa18.42■□□□□ 0.54
TRIM39-209ENST00000428728 FAM3CQ92520 227 aa18.42■□□□□ 0.54
TRIM39-209ENST00000428728 MKNK1Q9BUB5 465 aa18.42■□□□□ 0.54
TRIM39-209ENST00000428728 PCIF1Q9H4Z3 704 aa18.42■□□□□ 0.54
TRIM39-209ENST00000428728 HSFX1Q9UBD0 423 aa18.42■□□□□ 0.54
TRIM39-209ENST00000428728 MORC2Q9Y6X9 1032 aaPredicted RBP18.42■□□□□ 0.54
TRIM39-209ENST00000428728 PTPRDP23468 1912 aa18.42■□□□□ 0.54
TRIM39-209ENST00000428728 HELZP42694 1942 aaKnown RBP18.42■□□□□ 0.54
TRIM39-209ENST00000428728 SLC38A8A6NNN8 435 aa18.41■□□□□ 0.54
TRIM39-209ENST00000428728 DPYSL4O14531 572 aa18.41■□□□□ 0.54
TRIM39-209ENST00000428728 GARTP22102 1010 aa18.41■□□□□ 0.54
TRIM39-209ENST00000428728 TUFMP49411 452 aaKnown RBP18.41■□□□□ 0.54
TRIM39-209ENST00000428728 MTAPQ13126 283 aa18.41■□□□□ 0.54
TRIM39-209ENST00000428728 FZD5Q13467 585 aa18.41■□□□□ 0.54
TRIM39-209ENST00000428728 TAF12Q16514 161 aa18.41■□□□□ 0.54
TRIM39-209ENST00000428728 ZNF528Q3MIS6 628 aa18.41■□□□□ 0.54
TRIM39-209ENST00000428728 FOXD4L5Q5VV16 416 aaPredicted RBP18.41■□□□□ 0.54
TRIM39-209ENST00000428728 LRRTM3Q86VH5 581 aa18.41■□□□□ 0.54
TRIM39-209ENST00000428728 CCDC65Q8IXS2 484 aa18.41■□□□□ 0.54
TRIM39-209ENST00000428728 C1orf127Q8N9H9 656 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms