RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 KRT79Q5XKE5 535 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 TPRG1Q6ZUI0 275 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 UNC13DQ70J99 1090 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 CATSPER4Q7RTX7 472 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 RETREG3Q86VR2 466 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 TMEM139Q8IV31 216 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 EXOC8Q8IYI6 725 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 FAM160A2Q8N612 972 aaPredicted RBP9.42□□□□□ -0.9
HDAC1-202ENST00000428704 RNF149Q8NC42 400 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 ANKRD20A12PQ8NF67 263 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 LRRC15Q8TF66 581 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 TCP11Q8WWU5 503 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 NELFBQ8WX92 580 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 CCDC51Q96ER9 411 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 PANX2Q96RD6 677 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 RPP25Q9BUL9 199 aaKnown RBP9.42□□□□□ -0.9
HDAC1-202ENST00000428704 NAA15Q9BXJ9 866 aaKnown RBP9.42□□□□□ -0.9
HDAC1-202ENST00000428704 RHOBTB2Q9BYZ6 727 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 NT5C3AQ9H0P0 336 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 POLR3FQ9H1D9 316 aaPredicted RBP9.42□□□□□ -0.9
HDAC1-202ENST00000428704 GPRC5CQ9NQ84 441 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 CHST12Q9NRB3 414 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 ANKFY1Q9P2R3 1169 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 PIN4Q9Y237 131 aaKnown RBP9.42□□□□□ -0.9
HDAC1-202ENST00000428704 MRPS17Q9Y2R5 130 aaKnown RBP9.42□□□□□ -0.9
HDAC1-202ENST00000428704 MYH11P35749 1972 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 DSPP15924 2871 aaKnown RBP9.41□□□□□ -0.9
HDAC1-202ENST00000428704 A0A1W2PQC6 194 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 EIF4E1BA6NMX2 242 aaKnown RBP9.41□□□□□ -0.9
HDAC1-202ENST00000428704 ASAP2O43150 1006 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 TSPAN1O60635 241 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 RFPL2O75678 378 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 PTENP60484 403 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 MBTD1Q05BQ5 628 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 EHHADHQ08426 723 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 ZNF252P-AS1Q0IIN9 211 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 TRIM14Q14142 442 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 SF3A2Q15428 464 aaKnown RBP9.41□□□□□ -0.9
HDAC1-202ENST00000428704 TCP11X2Q5H9J9 407 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 STPG1Q5TH74 334 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 CENPPQ6IPU0 288 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 KLHL10Q6JEL2 608 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 TTI2Q6NXR4 508 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 PARM1Q6UWI2 310 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 ZNF852Q6ZMS4 543 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 SRGAP1Q7Z6B7 1085 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 IRF2BP1Q8IU81 584 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 TC2NQ8N9U0 490 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 RASSF8Q8NHQ8 419 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 BCL7CQ8WUZ0 217 aaPredicted RBP9.41□□□□□ -0.9
HDAC1-202ENST00000428704 BSNDQ8WZ55 320 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 LARP4BQ92615 738 aaKnown RBP9.41□□□□□ -0.9
HDAC1-202ENST00000428704 RAD54LQ92698 747 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 FGF14Q92915 247 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 LPPQ93052 612 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 INO80BQ9C086 356 aaPredicted RBP9.41□□□□□ -0.9
HDAC1-202ENST00000428704 SLC6A16Q9GZN6 736 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 MRPL17Q9NRX2 175 aaKnown RBP9.41□□□□□ -0.9
HDAC1-202ENST00000428704 FAM105AQ9NUU6 356 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 CTNND2Q9UQB3 1225 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 GDAQ9Y2T3 454 aa9.41□□□□□ -0.9
HDAC1-202ENST00000428704 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.41□□□□□ -0.96e-8■■■□□ 16.3
HDAC1-202ENST00000428704 NBEAQ8NFP9 2946 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 UQCRHLA0A096LP55 91 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 GOLGA6L9A6NEM1 432 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 AKR1B15C9JRZ8 316 aaPredicted RBP9.4□□□□□ -0.9
HDAC1-202ENST00000428704 C2CD2LO14523 706 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 B4GALT3O60512 393 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 ZNF623O75123 536 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 GLUD1P00367 558 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 ADH1AP07327 375 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 UQCRHP07919 91 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 TDGF1P13385 188 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 MUTP22033 750 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 GGCXP38435 758 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 CCT6AP40227 531 aaKnown RBP9.4□□□□□ -0.9
HDAC1-202ENST00000428704 NOVA1P51513 510 aaKnown RBP9.4□□□□□ -0.9
HDAC1-202ENST00000428704 CCR3P51677 355 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 COPB1P53618 953 aaKnown RBP9.4□□□□□ -0.9
HDAC1-202ENST00000428704 STX17P56962 302 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 POU5F1BQ06416 359 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 ADCY1Q08828 1119 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 SRSF5Q13243 272 aaKnown RBP9.4□□□□□ -0.9
HDAC1-202ENST00000428704 MXD4Q14582 209 aaPredicted RBP9.4□□□□□ -0.9
HDAC1-202ENST00000428704 SYCP1Q15431 976 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 HAUS3Q68CZ6 603 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 CDCA2Q69YH5 1023 aaPredicted RBP9.4□□□□□ -0.9
HDAC1-202ENST00000428704 TWF2Q6IBS0 349 aaKnown RBP9.4□□□□□ -0.9
HDAC1-202ENST00000428704 AGMOQ6ZNB7 445 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 MTSS1LQ765P7 747 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 CEP68Q76N32 757 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 MAEAQ7L5Y9 396 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 KCNK18Q7Z418 384 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 SMYD4Q8IYR2 804 aaPredicted RBP9.4□□□□□ -0.9
HDAC1-202ENST00000428704 GUF1Q8N442 669 aaKnown RBP9.4□□□□□ -0.9
HDAC1-202ENST00000428704 ERMNQ8TAM6 284 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 SNX29Q8TEQ0 813 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 GATA6Q92908 595 aa9.4□□□□□ -0.9
HDAC1-202ENST00000428704 ZNF707Q96C28 371 aaPredicted RBP9.4□□□□□ -0.9
HDAC1-202ENST00000428704 CDK5RAP3Q96JB5 506 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms