RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 TADA2AO75478 443 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 B3GAT3O94766 335 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 GFPT2O94808 682 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 KIF4AO95239 1232 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 CYP3A5P20815 502 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 DNAJB1P25685 340 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 MAGEA1P43355 309 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 RAPGEF1Q13905 1077 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 TDRD12Q587J7 1177 aaKnown RBP16.74■□□□□ 0.27
SHOX2-202ENST00000425436 HGSNATQ68CP4 663 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 DPY19L2P1Q6NXN4 242 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 CD300LGQ6UXG3 332 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 RNF10Q8N5U6 811 aaKnown RBP16.74■□□□□ 0.27
SHOX2-202ENST00000425436 DEFB123Q8N688 67 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 SPPL3Q8TCT6 385 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 TMEM169Q96HH4 297 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 TSPAN18Q96SJ8 248 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 C11orf84Q9BUA3 381 aaPredicted RBP16.74■□□□□ 0.27
SHOX2-202ENST00000425436 STK33Q9BYT3 514 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 MRFAP1Q9Y605 127 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 TMEM265A0A087WTH1 108 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 EFCAB8A8MWE9 144 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 TMEM191BP0C7N4 346 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 TRIM49P0CI25 452 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 TRIM49CP0CI26 452 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 FERP16591 822 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 GTF2H1P32780 548 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 RPL9P32969 192 aaKnown RBP16.73■□□□□ 0.27
SHOX2-202ENST00000425436 PRKCIP41743 596 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 STAT1P42224 750 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 KRT17Q04695 432 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 DUOXA2Q1HG44 320 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 C1orf220Q5T0J3 134 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 C9orf57Q5W0N0 161 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 DCLRE1AQ6PJP8 1040 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 TAS1R1Q7RTX1 841 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 NT5DC4Q86YG4 428 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 WDR49Q8IV35 697 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 SLC35F6Q8N357 371 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 C1orf127Q8N9H9 656 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 POF1BQ8WVV4 589 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 DDX27Q96GQ7 796 aaKnown RBP16.73■□□□□ 0.27
SHOX2-202ENST00000425436 UROC1Q96N76 676 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 CGRRF1Q99675 332 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 VN1R3Q9BXE9 311 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 CDC23Q9UJX2 597 aa16.73■□□□□ 0.27
SHOX2-202ENST00000425436 SCN1AP35498 2009 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 I3L4J1 428 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 PJA2O43164 708 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 LPXNO60711 386 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 TNNC2P02585 160 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 ITGB3P05106 788 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 KRT19P08727 400 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 LRPAP1P30533 357 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 PPM1AP35813 382 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 MYL7Q01449 175 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 PLCB3Q01970 1234 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 SLC18A3Q16572 532 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 GPR153Q6NV75 609 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 CEP112Q8N8E3 955 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 TRIM58Q8NG06 486 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 TMC2Q8TDI7 906 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 SECISBP2LQ93073 1101 aaKnown RBP16.72■□□□□ 0.27
SHOX2-202ENST00000425436 ANKRD36BP1Q96IX9 119 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 IRX2Q9BZI1 471 aaPredicted RBP16.72■□□□□ 0.27
SHOX2-202ENST00000425436 GPR62Q9BZJ7 368 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 ADAM28Q9UKQ2 775 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 REV3LO60673 3130 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 ATP8B3O60423 1300 aa16.72■□□□□ 0.27
SHOX2-202ENST00000425436 ANO9A1A5B4 782 aa16.71■□□□□ 0.27
SHOX2-202ENST00000425436 TACC1O75410 805 aa16.71■□□□□ 0.27
SHOX2-202ENST00000425436 PLEKP08567 350 aaPredicted RBP16.71■□□□□ 0.27
SHOX2-202ENST00000425436 POLR2BP30876 1174 aaKnown RBP16.71■□□□□ 0.27
SHOX2-202ENST00000425436 BRCC3P46736 316 aa16.71■□□□□ 0.27
SHOX2-202ENST00000425436 JAM2P57087 298 aa16.71■□□□□ 0.27
SHOX2-202ENST00000425436 ERVFC1P60507 584 aa16.71■□□□□ 0.27
SHOX2-202ENST00000425436 TRAPPC11Q7Z392 1133 aa16.71■□□□□ 0.27
SHOX2-202ENST00000425436 ANKRD7Q92527 254 aa16.71■□□□□ 0.27
SHOX2-202ENST00000425436 B3GALT6Q96L58 329 aa16.71■□□□□ 0.27
SHOX2-202ENST00000425436 SIX2Q9NPC8 291 aa16.71■□□□□ 0.27
SHOX2-202ENST00000425436 AGAP1Q9UPQ3 857 aa16.71■□□□□ 0.27
SHOX2-202ENST00000425436 COL4A4P53420 1690 aaPredicted RBP16.71■□□□□ 0.27
SHOX2-202ENST00000425436 MYO7AQ13402 2215 aa16.71■□□□□ 0.26
SHOX2-202ENST00000425436 PIRO00625 290 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 CST3P01034 146 aaPredicted RBP16.7■□□□□ 0.26
SHOX2-202ENST00000425436 GCLMP48507 274 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 CLDN10P78369 228 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 CYP27A1Q02318 531 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 PPP3CAQ08209 521 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 CAMK1Q14012 370 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 WHAMMP3Q1A5X7 153 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 FUT10Q6P4F1 479 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 IRF2BP2Q7Z5L9 587 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 DDX53Q86TM3 631 aaKnown RBP16.7■□□□□ 0.26
SHOX2-202ENST00000425436 VPS52Q8N1B4 723 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 CXorf38Q8TB03 319 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 UBXN4Q92575 508 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 FAM81BQ96LP2 452 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 ALS2CR12Q96Q35 445 aa16.7■□□□□ 0.26
SHOX2-202ENST00000425436 INTS2Q9H0H0 1204 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms