RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 SEPT11Q9NVA2 429 aaKnown RBP14.36□□□□□ -0.11
PRPF39-202ENST00000424478 ADAM28Q9UKQ2 775 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 PCDHGC5Q9Y5F6 944 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 A0A0U1RQJ8 604 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 HUS1O60921 280 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 EFCAB14O75071 495 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 ATICP31939 592 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 ASIC2Q16515 512 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 DCLRE1AQ6PJP8 1040 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 NOP9Q86U38 636 aaKnown RBP14.36□□□□□ -0.11
PRPF39-202ENST00000424478 TMEM139Q8IV31 216 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 ATRIPQ8WXE1 791 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 TFAP2BQ92481 460 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 MRPL9Q9BYD2 267 aaKnown RBP14.36□□□□□ -0.11
PRPF39-202ENST00000424478 ALG13Q9NP73 1137 aaKnown RBP14.36□□□□□ -0.11
PRPF39-202ENST00000424478 YBX2Q9Y2T7 364 aaKnown RBP14.36□□□□□ -0.11
PRPF39-202ENST00000424478 TMCO5BA8MYB1 307 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 CD19P15391 556 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 RPL9P32969 192 aaKnown RBP14.36□□□□□ -0.11
PRPF39-202ENST00000424478 CA8P35219 290 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 PTK2Q05397 1052 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 C2CD6Q53TS8 623 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 FIGNQ5HY92 759 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 RTP2Q5QGT7 225 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 HGSNATQ68CP4 663 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 PRSS55Q6UWB4 352 aaPredicted RBP14.36□□□□□ -0.11
PRPF39-202ENST00000424478 CNGA4Q8IV77 575 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 ZNF397Q8NF99 534 aaPredicted RBP14.36□□□□□ -0.11
PRPF39-202ENST00000424478 DNAJC7Q99615 494 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 RHOBTB2Q9BYZ6 727 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 IMPACTQ9P2X3 320 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 A8MXQ7 604 aa14.35□□□□□ -0.11
PRPF39-202ENST00000424478 LINC00271P0C7V0 271 aa14.35□□□□□ -0.11
PRPF39-202ENST00000424478 STAT1P42224 750 aa14.35□□□□□ -0.11
PRPF39-202ENST00000424478 ARPP19P56211 112 aa14.35□□□□□ -0.11
PRPF39-202ENST00000424478 FIBCD1Q8N539 461 aa14.35□□□□□ -0.11
PRPF39-202ENST00000424478 A0A1W2PQJ5 194 aa14.35□□□□□ -0.11
PRPF39-202ENST00000424478 RAD23BP54727 409 aa14.35□□□□□ -0.11
PRPF39-202ENST00000424478 RASIP1Q5U651 963 aa14.35□□□□□ -0.11
PRPF39-202ENST00000424478 FUT10Q6P4F1 479 aa14.35□□□□□ -0.11
PRPF39-202ENST00000424478 RAD9BQ6WBX8 426 aa14.35□□□□□ -0.11
PRPF39-202ENST00000424478 ZNF571Q7Z3V5 609 aaPredicted RBP14.35□□□□□ -0.11
PRPF39-202ENST00000424478 FAM71AQ8IYT1 594 aa14.35□□□□□ -0.11
PRPF39-202ENST00000424478 DDX43Q9NXZ2 648 aaKnown RBP14.35□□□□□ -0.11
PRPF39-202ENST00000424478 INSL6Q9Y581 213 aa14.35□□□□□ -0.11
PRPF39-202ENST00000424478 MMEP08473 750 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 EIF4A3P38919 411 aaKnown RBP14.34□□□□□ -0.11
PRPF39-202ENST00000424478 HTRA4P83105 476 aaPredicted RBP14.34□□□□□ -0.11
PRPF39-202ENST00000424478 CCZ1BP86790 482 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 CCZ1P86791 482 aaPredicted RBP14.34□□□□□ -0.11
PRPF39-202ENST00000424478 CYP27A1Q02318 531 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 KLHL30Q0D2K2 578 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 TRIM14Q14142 442 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 UBR7Q8N806 425 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 COLGALT1Q8NBJ5 622 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 SLC4A11Q8NBS3 891 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 DDX27Q96GQ7 796 aaKnown RBP14.34□□□□□ -0.11
PRPF39-202ENST00000424478 RAD9AQ99638 391 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 BAG1Q99933 345 aaPredicted RBP14.34□□□□□ -0.11
PRPF39-202ENST00000424478 RTP3Q9BQQ7 232 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.34□□□□□ -0.11
PRPF39-202ENST00000424478 VRTNQ9H8Y1 702 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 PYCARDQ9ULZ3 195 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.34□□□□□ -0.11
PRPF39-202ENST00000424478 CLDN5O00501 218 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 CILPO75339 1184 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 CCDC130P13994 396 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 GNL1P36915 607 aaPredicted RBP14.34□□□□□ -0.11
PRPF39-202ENST00000424478 PNPLA4P41247 253 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 RSPO2Q6UXX9 243 aaPredicted RBP14.34□□□□□ -0.11
PRPF39-202ENST00000424478 PHLDB2Q86SQ0 1253 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 STKLD1Q8NE28 680 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 OR10T2Q8NGX3 314 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 SLC9A7Q96T83 725 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 GDAP2Q9NXN4 497 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 MYH10P35580 1976 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 PIK3R2O00459 728 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 TBXAS1P24557 533 aaPredicted RBP14.34□□□□□ -0.11
PRPF39-202ENST00000424478 TSC2P49815 1807 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 GFPT1Q06210 699 aaPredicted RBP14.34□□□□□ -0.11
PRPF39-202ENST00000424478 TAF4BQ92750 862 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 JAKMIP2Q96AA8 810 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 IGSF21Q96ID5 467 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 HEXIM2Q96MH2 286 aaKnown RBP14.34□□□□□ -0.11
PRPF39-202ENST00000424478 ZNF558Q96NG5 402 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 SNX25Q9H3E2 840 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 CHORDC1Q9UHD1 332 aaPredicted RBP14.34□□□□□ -0.11
PRPF39-202ENST00000424478 ADAMTS1Q9UHI8 967 aa14.34□□□□□ -0.11
PRPF39-202ENST00000424478 PLXNA4Q9HCM2 1894 aa14.33□□□□□ -0.11
PRPF39-202ENST00000424478 LINC01553A4QN01 128 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 GOLGA6L6A8MZA4 724 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 THAP12O43422 761 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 GNA15P30679 374 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 TOGARAM2Q6ZUX3 1019 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 CMTR2Q8IYT2 770 aaKnown RBP14.33□□□□□ -0.12
PRPF39-202ENST00000424478 KLHL23Q8NBE8 558 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 EPS8L1Q8TE68 723 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 PGLYRP2Q96PD5 576 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 TAS2R14Q9NYV8 317 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 GTF3C4Q9UKN8 822 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms