RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 E7EWF7 191 aa13.11□□□□□ -0.31
UFD1-203ENST00000421968 CPB1P15086 417 aa13.11□□□□□ -0.31
UFD1-203ENST00000421968 WEE1P30291 646 aa13.11□□□□□ -0.31
UFD1-203ENST00000421968 ZNF33AQ06730 810 aa13.11□□□□□ -0.31
UFD1-203ENST00000421968 TFDP1Q14186 410 aa13.11□□□□□ -0.31
UFD1-203ENST00000421968 EMC2Q15006 297 aa13.11□□□□□ -0.31
UFD1-203ENST00000421968 UPP1Q16831 310 aa13.11□□□□□ -0.31
UFD1-203ENST00000421968 PREPLQ4J6C6 727 aaPredicted RBP13.11□□□□□ -0.31
UFD1-203ENST00000421968 CCDC157Q569K6 752 aa13.11□□□□□ -0.31
UFD1-203ENST00000421968 RNF19BQ6ZMZ0 732 aa13.11□□□□□ -0.31
UFD1-203ENST00000421968 CDC6Q99741 560 aa13.11□□□□□ -0.31
UFD1-203ENST00000421968 DNAJC25Q9H1X3 360 aa13.11□□□□□ -0.31
UFD1-203ENST00000421968 BARHL2Q9NY43 387 aa13.11□□□□□ -0.31
UFD1-203ENST00000421968 SYN3O14994 580 aa13.1□□□□□ -0.31
UFD1-203ENST00000421968 FGF19O95750 216 aa13.1□□□□□ -0.31
UFD1-203ENST00000421968 HNRNPLP14866 589 aaKnown RBP eCLIP13.1□□□□□ -0.31
UFD1-203ENST00000421968 CYP4F8P98187 520 aa13.1□□□□□ -0.31
UFD1-203ENST00000421968 TLE3Q04726 772 aa13.1□□□□□ -0.31
UFD1-203ENST00000421968 MXD4Q14582 209 aaPredicted RBP13.1□□□□□ -0.31
UFD1-203ENST00000421968 SMAD1Q15797 465 aaKnown RBP13.1□□□□□ -0.31
UFD1-203ENST00000421968 GLRA4Q5JXX5 417 aa13.1□□□□□ -0.31
UFD1-203ENST00000421968 CC2D1AQ6P1N0 951 aaPredicted RBP13.1□□□□□ -0.31
UFD1-203ENST00000421968 CASC1Q6TDU7 716 aa13.1□□□□□ -0.31
UFD1-203ENST00000421968 TMEM92Q6UXU6 159 aa13.1□□□□□ -0.31
UFD1-203ENST00000421968 IFNLR1Q8IU57 520 aaPredicted RBP13.1□□□□□ -0.31
UFD1-203ENST00000421968 PGBD3Q8N328 593 aa13.1□□□□□ -0.31
UFD1-203ENST00000421968 ZNF513Q8N8E2 541 aaPredicted RBP13.1□□□□□ -0.31
UFD1-203ENST00000421968 FANCBQ8NB91 859 aa13.1□□□□□ -0.31
UFD1-203ENST00000421968 EXOC6Q8TAG9 804 aa13.1□□□□□ -0.31
UFD1-203ENST00000421968 UROC1Q96N76 676 aa13.1□□□□□ -0.31
UFD1-203ENST00000421968 GOLGA2P5Q9HBQ8 144 aa13.1□□□□□ -0.31
UFD1-203ENST00000421968 TAF6LQ9Y6J9 622 aa13.1□□□□□ -0.31
UFD1-203ENST00000421968 AK5Q9Y6K8 562 aa13.1□□□□□ -0.31
UFD1-203ENST00000421968 CABIN1Q9Y6J0 2220 aa13.1□□□□□ -0.31
UFD1-203ENST00000421968 ZNF638Q14966 1978 aaKnown RBP13.1□□□□□ -0.31
UFD1-203ENST00000421968 CNTNAP5Q8WYK1 1306 aa13.1□□□□□ -0.31
UFD1-203ENST00000421968 KNL1Q8NG31 2342 aa13.1□□□□□ -0.31
UFD1-203ENST00000421968 A0A1W2PQD8 194 aa13.09□□□□□ -0.31
UFD1-203ENST00000421968 hCG_1984214I3L0E3 225 aa13.09□□□□□ -0.31
UFD1-203ENST00000421968 PSMD10O75832 226 aa13.09□□□□□ -0.31
UFD1-203ENST00000421968 KRT10P13645 584 aa13.09□□□□□ -0.31
UFD1-203ENST00000421968 ADSSP30520 456 aa13.09□□□□□ -0.31
UFD1-203ENST00000421968 ALDH1A3P47895 512 aa13.09□□□□□ -0.31
UFD1-203ENST00000421968 MRPL58Q14197 206 aaKnown RBP13.09□□□□□ -0.31
UFD1-203ENST00000421968 C20orf194Q5TEA3 1177 aa13.09□□□□□ -0.31
UFD1-203ENST00000421968 ZNF280DQ6N043 979 aa13.09□□□□□ -0.31
UFD1-203ENST00000421968 DNAJB7Q7Z6W7 309 aaPredicted RBP13.09□□□□□ -0.31
UFD1-203ENST00000421968 MB21D2Q8IYB1 491 aaPredicted RBP13.09□□□□□ -0.31
UFD1-203ENST00000421968 TMTC2Q8N394 836 aa13.09□□□□□ -0.31
UFD1-203ENST00000421968 CPA6Q8N4T0 437 aa13.09□□□□□ -0.31
UFD1-203ENST00000421968 ZNF713Q8N859 430 aaPredicted RBP13.09□□□□□ -0.31
UFD1-203ENST00000421968 RHBDD1Q8TEB9 315 aa13.09□□□□□ -0.31
UFD1-203ENST00000421968 HMGB4Q8WW32 186 aa13.09□□□□□ -0.31
UFD1-203ENST00000421968 CCDC136Q96JN2 1154 aa13.09□□□□□ -0.31
UFD1-203ENST00000421968 ECT2Q9H8V3 914 aa13.09□□□□□ -0.31
UFD1-203ENST00000421968 PPME1Q9Y570 386 aa13.09□□□□□ -0.31
UFD1-203ENST00000421968 V9GY48 417 aaPredicted RBP13.09□□□□□ -0.31
UFD1-203ENST00000421968 TRIP11Q15643 1979 aa13.09□□□□□ -0.31
UFD1-203ENST00000421968 ITPR3Q14573 2671 aa13.08□□□□□ -0.31
UFD1-203ENST00000421968 ANTXRLA6NF34 631 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 HIP1O00291 1037 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 ADAMTS3O15072 1205 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 CCR10P46092 362 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 POU5F1BQ06416 359 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 CCDC173Q0VFZ6 552 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 BFSP1Q12934 665 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 GRIK2Q13002 908 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 PDGFRLQ15198 375 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 C4orf17Q53FE4 359 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 C6orf118Q5T5N4 469 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 SLC36A4Q6YBV0 504 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 RGL4Q8IZJ4 473 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 REXO1Q8N1G1 1221 aaKnown RBP13.08□□□□□ -0.32
UFD1-203ENST00000421968 SNIP1Q8TAD8 396 aaKnown RBP13.08□□□□□ -0.32
UFD1-203ENST00000421968 BAHD1Q8TBE0 780 aaPredicted RBP13.08□□□□□ -0.32
UFD1-203ENST00000421968 PGLYRP2Q96PD5 576 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 PPP1R10Q96QC0 940 aaKnown RBP13.08□□□□□ -0.32
UFD1-203ENST00000421968 GCNAQ96QF7 691 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 MTRQ99707 1265 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 SLC46A2Q9BY10 475 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 CCL26Q9Y258 94 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 GDAQ9Y2T3 454 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 ASB3Q9Y575 518 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 PAXBP1Q9Y5B6 917 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 SLC12A7Q9Y666 1083 aa13.08□□□□□ -0.32
UFD1-203ENST00000421968 MARCH6O60337 910 aa13.07□□□□□ -0.32
UFD1-203ENST00000421968 AVPR1AP37288 418 aa13.07□□□□□ -0.32
UFD1-203ENST00000421968 QARSP47897 775 aaKnown RBP13.07□□□□□ -0.32
UFD1-203ENST00000421968 DUSP4Q13115 394 aa13.07□□□□□ -0.32
UFD1-203ENST00000421968 CAPSQ13938 189 aa13.07□□□□□ -0.32
UFD1-203ENST00000421968 DHRS13Q6UX07 377 aa13.07□□□□□ -0.32
UFD1-203ENST00000421968 MICU3Q86XE3 530 aa13.07□□□□□ -0.32
UFD1-203ENST00000421968 NOSTRINQ8IVI9 506 aa13.07□□□□□ -0.32
UFD1-203ENST00000421968 SPACA3Q8IXA5 215 aa13.07□□□□□ -0.32
UFD1-203ENST00000421968 CMTM8Q8IZV2 173 aa13.07□□□□□ -0.32
UFD1-203ENST00000421968 TRIML1Q8N9V2 468 aa13.07□□□□□ -0.32
UFD1-203ENST00000421968 PSMG2Q969U7 264 aa13.07□□□□□ -0.32
UFD1-203ENST00000421968 MED8Q96G25 268 aa13.07□□□□□ -0.32
UFD1-203ENST00000421968 HSPA12BQ96MM6 686 aa13.07□□□□□ -0.32
UFD1-203ENST00000421968 ZDHHC5Q9C0B5 715 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms