RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 CEP128Q6ZU80 1094 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 SV2AQ7L0J3 742 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 ZNF276Q8N554 614 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 SPIRE2Q8WWL2 714 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 KLF6Q99612 283 aaPredicted RBP22.44■■□□□ 1.18
USP48-205ENST00000421625 PPP1R12CQ9BZL4 782 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 FBXO6Q9NRD1 293 aaPredicted RBP22.44■■□□□ 1.18
USP48-205ENST00000421625 TCF4P15884 667 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 PDIA2Q13087 525 aaKnown RBP22.44■■□□□ 1.18
USP48-205ENST00000421625 LRRC74BQ6ZQY2 392 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 RINLQ6ZS11 566 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 APLFQ8IW19 511 aaPredicted RBP22.44■■□□□ 1.18
USP48-205ENST00000421625 PTPRN2Q92932 1015 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 GPX6P59796 221 aa22.43■■□□□ 1.18
USP48-205ENST00000421625 MON1BQ7L1V2 547 aa22.43■■□□□ 1.18
USP48-205ENST00000421625 OGFOD1Q8N543 542 aa22.43■■□□□ 1.18
USP48-205ENST00000421625 HAUS1Q96CS2 278 aa22.43■■□□□ 1.18
USP48-205ENST00000421625 ZC3H12CQ9C0D7 883 aaKnown RBP22.43■■□□□ 1.18
USP48-205ENST00000421625 SLC17A7Q9P2U7 560 aa22.43■■□□□ 1.18
USP48-205ENST00000421625 SCOCQ9UIL1 159 aa22.43■■□□□ 1.18
USP48-205ENST00000421625 LTBP1Q14766 1721 aa22.43■■□□□ 1.18
USP48-205ENST00000421625 GYG2O15488 501 aa22.43■■□□□ 1.18
USP48-205ENST00000421625 ZWINTO95229 277 aa22.43■■□□□ 1.18
USP48-205ENST00000421625 PSMG1O95456 288 aa22.43■■□□□ 1.18
USP48-205ENST00000421625 ATF7P17544 494 aaPredicted RBP22.43■■□□□ 1.18
USP48-205ENST00000421625 CETN2P41208 172 aa22.43■■□□□ 1.18
USP48-205ENST00000421625 OCRLQ01968 901 aa22.43■■□□□ 1.18
USP48-205ENST00000421625 GAD2Q05329 585 aa22.43■■□□□ 1.18
USP48-205ENST00000421625 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.43■■□□□ 1.18
USP48-205ENST00000421625 UTRNP46939 3433 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 PPEF1O14829 653 aaPredicted RBP22.42■■□□□ 1.18
USP48-205ENST00000421625 PLSCR1O15162 318 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 ALOX15BO15296 676 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 DSG3P32926 999 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 ECE1P42892 770 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 STAT2P52630 851 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 SLC34A1Q06495 639 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 NFX1Q12986 1120 aaKnown RBP22.42■■□□□ 1.18
USP48-205ENST00000421625 ZFYVE27Q5T4F4 411 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 LRRC6Q86X45 466 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 EXD1Q8NHP7 514 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 ZNF398Q8TD17 642 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 TCP10LQ8TDR4 215 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 C2orf71A6NGG8 1288 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 SMAPO00193 183 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 HNRNPCL1O60812 293 aaKnown RBP22.42■■□□□ 1.18
USP48-205ENST00000421625 SKIP12755 728 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 ITGB5P18084 799 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 KCNA3P22001 575 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 SERPINB3P29508 390 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 GCLCP48506 637 aaPredicted RBP22.42■■□□□ 1.18
USP48-205ENST00000421625 POLE2P56282 527 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.42■■□□□ 1.18
USP48-205ENST00000421625 ZNF219Q9P2Y4 722 aaPredicted RBP22.42■■□□□ 1.18
USP48-205ENST00000421625 SLC24A2Q9UI40 661 aa22.42■■□□□ 1.18
USP48-205ENST00000421625 LOXHD1Q8IVV2 1947 aa22.41■■□□□ 1.18
USP48-205ENST00000421625 HOXA10P31260 410 aaPredicted RBP22.41■■□□□ 1.18
USP48-205ENST00000421625 SEPT7Q16181 437 aaKnown RBP22.41■■□□□ 1.18
USP48-205ENST00000421625 EAPPQ56P03 285 aaPredicted RBP22.41■■□□□ 1.18
USP48-205ENST00000421625 ZNF772Q68DY9 489 aaPredicted RBP22.41■■□□□ 1.18
USP48-205ENST00000421625 SCYL3Q8IZE3 742 aa22.41■■□□□ 1.18
USP48-205ENST00000421625 ALLCQ8N6M5 410 aa22.41■■□□□ 1.18
USP48-205ENST00000421625 MCUR1Q96AQ8 359 aa22.41■■□□□ 1.18
USP48-205ENST00000421625 AKT1S1Q96B36 256 aa22.41■■□□□ 1.18
USP48-205ENST00000421625 NSL1Q96IY1 281 aa22.41■■□□□ 1.18
USP48-205ENST00000421625 CLUHO75153 1309 aa22.41■■□□□ 1.18
USP48-205ENST00000421625 P4HBP07237 508 aaKnown RBP22.41■■□□□ 1.18
USP48-205ENST00000421625 SSTR1P30872 391 aa22.41■■□□□ 1.18
USP48-205ENST00000421625 RBM5P52756 815 aaKnown RBP eCLIP22.41■■□□□ 1.18
USP48-205ENST00000421625 MAMLD1Q13495 774 aa22.41■■□□□ 1.18
USP48-205ENST00000421625 MTM1Q13496 603 aa22.41■■□□□ 1.18
USP48-205ENST00000421625 TFDP1Q14186 410 aa22.41■■□□□ 1.18
USP48-205ENST00000421625 EFHC2Q5JST6 749 aa22.41■■□□□ 1.18
USP48-205ENST00000421625 RNASEH2BQ5TBB1 312 aaKnown RBP22.41■■□□□ 1.18
USP48-205ENST00000421625 NLRX1Q86UT6 975 aa22.41■■□□□ 1.18
USP48-205ENST00000421625 KBTBD2Q8IY47 623 aa22.41■■□□□ 1.18
USP48-205ENST00000421625 TRIM11Q96F44 468 aa22.41■■□□□ 1.18
USP48-205ENST00000421625 ZBED4O75132 1171 aa22.4■■□□□ 1.18
USP48-205ENST00000421625 CACNA2D1P54289 1103 aa22.4■■□□□ 1.18
USP48-205ENST00000421625 GEMIN4P57678 1058 aaKnown RBP22.4■■□□□ 1.18
USP48-205ENST00000421625 SPP2Q13103 211 aa22.4■■□□□ 1.18
USP48-205ENST00000421625 RFX8Q6ZV50 586 aa22.4■■□□□ 1.18
USP48-205ENST00000421625 RABGEF1Q9UJ41 708 aa22.4■■□□□ 1.18
USP48-205ENST00000421625 WASF2Q9Y6W5 498 aa22.4■■□□□ 1.18
USP48-205ENST00000421625 CYP1A1P04798 512 aaPredicted RBP22.4■■□□□ 1.18
USP48-205ENST00000421625 MORF4L2Q15014 288 aa22.4■■□□□ 1.18
USP48-205ENST00000421625 MFSD7Q6UXD7 560 aa22.4■■□□□ 1.18
USP48-205ENST00000421625 CENPUQ71F23 418 aa22.4■■□□□ 1.18
USP48-205ENST00000421625 TTC7BQ86TV6 843 aa22.4■■□□□ 1.18
USP48-205ENST00000421625 VPS52Q8N1B4 723 aa22.4■■□□□ 1.18
USP48-205ENST00000421625 ZCWPW1Q9H0M4 648 aa22.4■■□□□ 1.18
USP48-205ENST00000421625 MANSC1Q9H8J5 431 aa22.4■■□□□ 1.18
USP48-205ENST00000421625 TAS2R1Q9NYW7 299 aa22.4■■□□□ 1.18
USP48-205ENST00000421625 NCKAP1LP55160 1127 aa22.39■■□□□ 1.18
USP48-205ENST00000421625 FAM102BQ5T8I3 360 aa22.39■■□□□ 1.18
USP48-205ENST00000421625 LMBRD2Q68DH5 695 aaPredicted RBP22.39■■□□□ 1.18
USP48-205ENST00000421625 NLGN1Q8N2Q7 840 aa22.39■■□□□ 1.18
USP48-205ENST00000421625 ACSF2Q96CM8 615 aaPredicted RBP22.39■■□□□ 1.18
USP48-205ENST00000421625 RIT2Q99578 217 aa22.39■■□□□ 1.18
USP48-205ENST00000421625 MXRA8Q9BRK3 442 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms