RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 EXTL3O43909 919 aa23.01■■□□□ 1.27
PTPN4-202ENST00000420482 CASP5P51878 434 aa23.01■■□□□ 1.27
PTPN4-202ENST00000420482 ARHGAP15Q53QZ3 475 aa23.01■■□□□ 1.27
PTPN4-202ENST00000420482 TPRG1Q6ZUI0 275 aa23.01■■□□□ 1.27
PTPN4-202ENST00000420482 EFCAB13Q8IY85 973 aa23.01■■□□□ 1.27
PTPN4-202ENST00000420482 ATAD1Q8NBU5 361 aa23.01■■□□□ 1.27
PTPN4-202ENST00000420482 ZSCAN18Q8TBC5 510 aaPredicted RBP23.01■■□□□ 1.27
PTPN4-202ENST00000420482 SPPL2BQ8TCT7 592 aa23.01■■□□□ 1.27
PTPN4-202ENST00000420482 PSMG2Q969U7 264 aa23.01■■□□□ 1.27
PTPN4-202ENST00000420482 SAAL1Q96ER3 474 aa23.01■■□□□ 1.27
PTPN4-202ENST00000420482 PLA2G2FQ9BZM2 168 aa23.01■■□□□ 1.27
PTPN4-202ENST00000420482 ZCWPW1Q9H0M4 648 aa23.01■■□□□ 1.27
PTPN4-202ENST00000420482 TRPV4Q9HBA0 871 aa23.01■■□□□ 1.27
PTPN4-202ENST00000420482 DLGAP2Q9P1A6 1054 aa23.01■■□□□ 1.27
PTPN4-202ENST00000420482 TFIP11Q9UBB9 837 aaKnown RBP23.01■■□□□ 1.27
PTPN4-202ENST00000420482 SLC27A5Q9Y2P5 690 aa23.01■■□□□ 1.27
PTPN4-202ENST00000420482 ANK1P16157 1881 aa23■■□□□ 1.27
PTPN4-202ENST00000420482 A0A1W2PRU2 124 aa23■■□□□ 1.27
PTPN4-202ENST00000420482 FAM170BA6NMN3 283 aa23■■□□□ 1.27
PTPN4-202ENST00000420482 MAN2B1O00754 1011 aa23■■□□□ 1.27
PTPN4-202ENST00000420482 FCARP24071 287 aa23■■□□□ 1.27
PTPN4-202ENST00000420482 TSPY1Q01534 308 aa23■■□□□ 1.27
PTPN4-202ENST00000420482 TEAD2Q15562 447 aa23■■□□□ 1.27
PTPN4-202ENST00000420482 MGAT5BQ3V5L5 792 aa23■■□□□ 1.27
PTPN4-202ENST00000420482 YAF2Q8IY57 180 aa23■■□□□ 1.27
PTPN4-202ENST00000420482 GPD1LQ8N335 351 aa23■■□□□ 1.27
PTPN4-202ENST00000420482 KCNG4Q8TDN1 519 aa23■■□□□ 1.27
PTPN4-202ENST00000420482 GCNAQ96QF7 691 aa23■■□□□ 1.27
PTPN4-202ENST00000420482 SEPT5Q99719 369 aaPredicted RBP23■■□□□ 1.27
PTPN4-202ENST00000420482 IKZF4Q9H2S9 585 aa23■■□□□ 1.27
PTPN4-202ENST00000420482 MAGEF1Q9HAY2 307 aa23■■□□□ 1.27
PTPN4-202ENST00000420482 LTB4R2Q9NPC1 389 aa23■■□□□ 1.27
PTPN4-202ENST00000420482 TRPV5Q9NQA5 729 aa23■■□□□ 1.27
PTPN4-202ENST00000420482 KBTBD4Q9NVX7 518 aa23■■□□□ 1.27
PTPN4-202ENST00000420482 ITGA11Q9UKX5 1188 aa23■■□□□ 1.27
PTPN4-202ENST00000420482 HUS1O60921 280 aa22.99■■□□□ 1.27
PTPN4-202ENST00000420482 PRPF6O94906 941 aaKnown RBP22.99■■□□□ 1.27
PTPN4-202ENST00000420482 VNN2O95498 520 aa22.99■■□□□ 1.27
PTPN4-202ENST00000420482 TMEM191BP0C7N4 346 aa22.99■■□□□ 1.27
PTPN4-202ENST00000420482 ASIC1P78348 528 aa22.99■■□□□ 1.27
PTPN4-202ENST00000420482 GRM2Q14416 872 aa22.99■■□□□ 1.27
PTPN4-202ENST00000420482 SURF1Q15526 300 aa22.99■■□□□ 1.27
PTPN4-202ENST00000420482 ATL3Q6DD88 541 aa22.99■■□□□ 1.27
PTPN4-202ENST00000420482 DNAJB7Q7Z6W7 309 aaPredicted RBP22.99■■□□□ 1.27
PTPN4-202ENST00000420482 LRRC52Q8N7C0 313 aa22.99■■□□□ 1.27
PTPN4-202ENST00000420482 OR10T2Q8NGX3 314 aa22.99■■□□□ 1.27
PTPN4-202ENST00000420482 SHKBP1Q8TBC3 707 aa22.99■■□□□ 1.27
PTPN4-202ENST00000420482 DHX58Q96C10 678 aa22.99■■□□□ 1.27
PTPN4-202ENST00000420482 DNAJC25Q9H1X3 360 aa22.99■■□□□ 1.27
PTPN4-202ENST00000420482 CRISPLD1Q9H336 500 aa22.99■■□□□ 1.27
PTPN4-202ENST00000420482 ATXN3LQ9H3M9 355 aa22.99■■□□□ 1.27
PTPN4-202ENST00000420482 HEBP1Q9NRV9 189 aa22.99■■□□□ 1.27
PTPN4-202ENST00000420482 SPATA6Q9NWH7 488 aaPredicted RBP22.99■■□□□ 1.27
PTPN4-202ENST00000420482 AGAP1Q9UPQ3 857 aa22.99■■□□□ 1.27
PTPN4-202ENST00000420482 WDR87Q6ZQQ6 2873 aa22.99■■□□□ 1.27
PTPN4-202ENST00000420482 DPYSL4O14531 572 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 ZNF263O14978 683 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 LAMTOR5O43504 91 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 MOSPD3O75425 235 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 ITGB3P05106 788 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 ZSCAN22P10073 491 aaPredicted RBP22.98■■□□□ 1.27
PTPN4-202ENST00000420482 GJA1P17302 382 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 POLR2BP30876 1174 aaKnown RBP22.98■■□□□ 1.27
PTPN4-202ENST00000420482 GDI1P31150 447 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 FOXK2Q01167 660 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 WSCD1Q658N2 575 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 TMC8Q8IU68 726 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 MFSD6LQ8IWD5 586 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 BORCS6Q96GS4 357 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 ANKRD36BP1Q96IX9 119 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 ZSWIM3Q96MP5 696 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 TMEM209Q96SK2 561 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 CBWD1Q9BRT8 395 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 TRIM9Q9C026 710 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 PCIF1Q9H4Z3 704 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 KIAA1586Q9HCI6 787 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 FAM13BQ9NYF5 915 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 ZMYM5Q9UJ78 669 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 CFAP45Q9UL16 551 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 TSC2P49815 1807 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 PATJQ8NI35 1801 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 TCHHQ07283 1943 aa22.98■■□□□ 1.27
PTPN4-202ENST00000420482 EP300Q09472 2414 aaPredicted RBP22.98■■□□□ 1.27
PTPN4-202ENST00000420482 EIF3DO15371 548 aaKnown RBP eCLIP22.97■■□□□ 1.27
PTPN4-202ENST00000420482 KRT19P08727 400 aa22.97■■□□□ 1.27
PTPN4-202ENST00000420482 ME1P48163 572 aa22.97■■□□□ 1.27
PTPN4-202ENST00000420482 RBP5P82980 135 aa22.97■■□□□ 1.27
PTPN4-202ENST00000420482 MYL7Q01449 175 aa22.97■■□□□ 1.27
PTPN4-202ENST00000420482 E2F4Q16254 413 aa22.97■■□□□ 1.27
PTPN4-202ENST00000420482 NFE2Q16621 373 aaPredicted RBP22.97■■□□□ 1.27
PTPN4-202ENST00000420482 C1orf228Q6PIY5 440 aa22.97■■□□□ 1.27
PTPN4-202ENST00000420482 VITQ6UXI7 678 aa22.97■■□□□ 1.27
PTPN4-202ENST00000420482 ADSSL1Q8N142 457 aa22.97■■□□□ 1.27
PTPN4-202ENST00000420482 TMEM86AQ8N2M4 240 aa22.97■■□□□ 1.27
PTPN4-202ENST00000420482 CSGALNACT2Q8N6G5 542 aa22.97■■□□□ 1.27
PTPN4-202ENST00000420482 CSGALNACT1Q8TDX6 532 aa22.97■■□□□ 1.27
PTPN4-202ENST00000420482 LRRC3Q9BY71 257 aa22.97■■□□□ 1.27
PTPN4-202ENST00000420482 ZNF334Q9HCZ1 680 aaPredicted RBP22.97■■□□□ 1.27
PTPN4-202ENST00000420482 PCDHB5Q9Y5E4 795 aa22.97■■□□□ 1.27
PTPN4-202ENST00000420482 CACNA1IQ9P0X4 2223 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms