RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 DDX53Q86TM3 631 aaKnown RBP13.71□□□□□ -0.21
ATG4B-208ENST00000419606 DRC7Q8IY82 874 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 VPS52Q8N1B4 723 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 OR6B3Q8NGW1 331 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 SPPL3Q8TCT6 385 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 ARNTL2Q8WYA1 636 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 SHC3Q92529 594 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 TIFAQ96CG3 184 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 STK33Q9BYT3 514 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 ELOVL4Q9GZR5 314 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 DPEP3Q9H4B8 488 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 CYP3A43Q9HB55 503 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 ACP6Q9NPH0 428 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 CHST7Q9NS84 486 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 CEP72Q9P209 647 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 PCDHB4Q9Y5E5 795 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 PCDHGC5Q9Y5F6 944 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 ATG2AQ2TAZ0 1938 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 COL4A4P53420 1690 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-208ENST00000419606 LRRC53A6NM62 1247 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 C5orf67F2Z3F1 127 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 F8VZ95 297 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 SOX1O00570 391 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-208ENST00000419606 C2CD2LO14523 706 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 GABRDO14764 452 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 ATP2C2O75185 946 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 CILPO75339 1184 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 SOD2P04179 222 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 RPL17P18621 184 aaKnown RBP13.7□□□□□ -0.22
ATG4B-208ENST00000419606 TYMPP19971 482 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 GNL1P36915 607 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-208ENST00000419606 USP8P40818 1118 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 ADKP55263 362 aaKnown RBP13.7□□□□□ -0.22
ATG4B-208ENST00000419606 INCA1Q0VD86 236 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 MRPL58Q14197 206 aaKnown RBP13.7□□□□□ -0.22
ATG4B-208ENST00000419606 ARID5BQ14865 1188 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 FIGNQ5HY92 759 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 PRPF38BQ5VTL8 546 aaKnown RBP13.7□□□□□ -0.22
ATG4B-208ENST00000419606 OVOS1Q6IE37 1185 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 PDXDC1Q6P996 788 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 TMEM270Q6UE05 265 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 RSPO2Q6UXX9 243 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-208ENST00000419606 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-208ENST00000419606 DPH6Q7L8W6 267 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 CACNA2D4Q7Z3S7 1137 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 FBXO22Q8NEZ5 403 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 OR10T2Q8NGX3 314 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 POF1BQ8WVV4 589 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 TTPALQ9BTX7 342 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 HERC2P3Q9BVR0 1158 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 PLVAPQ9BX97 442 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 SNX25Q9H3E2 840 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 SLC28A3Q9HAS3 691 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 DDX43Q9NXZ2 648 aaKnown RBP13.7□□□□□ -0.22
ATG4B-208ENST00000419606 FBXL5Q9UKA1 691 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 CAPN11Q9UMQ6 739 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 RWDD3Q9Y3V2 267 aa13.7□□□□□ -0.22
ATG4B-208ENST00000419606 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.7□□□□□ -0.223e-7■■□□□ 12.3
ATG4B-208ENST00000419606 A0A1W2PQJ5 194 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 A8MXQ7 604 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 SYN3O14994 580 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 ADAM12O43184 909 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 GFPT2O94808 682 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 OR4Q2P0C623 313 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 KRT5P13647 590 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 PAX3P23760 479 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 SSTR3P32745 418 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-208ENST00000419606 CLCN1P35523 988 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 RAD23BP54727 409 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 PSMC1P62191 440 aaKnown RBP13.69□□□□□ -0.22
ATG4B-208ENST00000419606 KRT17Q04695 432 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 YWHAHQ04917 246 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-208ENST00000419606 GPM6BQ13491 265 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 CAMK1Q14012 370 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 USP41Q3LFD5 358 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 LRIT3Q3SXY7 679 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 ENOSF1Q7L5Y1 443 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-208ENST00000419606 ACOT1Q86TX2 421 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 PPFIBP1Q86W92 1011 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 METTL23Q86XA0 190 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 TMEM86AQ8N2M4 240 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 SLC4A11Q8NBS3 891 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 RBBP8NLQ8NC74 664 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-208ENST00000419606 LNX1Q8TBB1 728 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-208ENST00000419606 GDPD5Q8WTR4 605 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 RIN2Q8WYP3 895 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-208ENST00000419606 FAXDC2Q96IV6 333 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 SPAG5Q96R06 1193 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 NUP58Q9BVL2 599 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 ZBP1Q9H171 429 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 BARX2Q9UMQ3 279 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-208ENST00000419606 STXBP5LQ9Y2K9 1186 aa13.69□□□□□ -0.22
ATG4B-208ENST00000419606 CHD7Q9P2D1 2997 aa13.68□□□□□ -0.22
ATG4B-208ENST00000419606 A0A1W2PPC1 479 aa13.68□□□□□ -0.22
ATG4B-208ENST00000419606 H3BNC9 293 aa13.68□□□□□ -0.22
ATG4B-208ENST00000419606 CYP26A1O43174 497 aa13.68□□□□□ -0.22
ATG4B-208ENST00000419606 TBC1D4O60343 1298 aa13.68□□□□□ -0.22
ATG4B-208ENST00000419606 OAZ2O95190 189 aa13.68□□□□□ -0.22
ATG4B-208ENST00000419606 RB1P06400 928 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms