RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 APOBEC3GQ9HC16 384 aaKnown RBP16.02■□□□□ 0.15
SEMA3B-203ENST00000419007 AGO2Q9UKV8 859 aaKnown RBP16.02■□□□□ 0.15
SEMA3B-203ENST00000419007 SCINQ9Y6U3 715 aa16.02■□□□□ 0.15
SEMA3B-203ENST00000419007 PEX19P40855 299 aa16.01■□□□□ 0.15
SEMA3B-203ENST00000419007 ACVR2BQ13705 512 aa16.01■□□□□ 0.15
SEMA3B-203ENST00000419007 ZACNQ401N2 412 aa16.01■□□□□ 0.15
SEMA3B-203ENST00000419007 TXNRD3NBQ6F5E7 133 aa16.01■□□□□ 0.15
SEMA3B-203ENST00000419007 EP400NLQ6ZTU2 488 aa16.01■□□□□ 0.15
SEMA3B-203ENST00000419007 TMEM143Q96AN5 459 aa16.01■□□□□ 0.15
SEMA3B-203ENST00000419007 PARVAQ9NVD7 372 aa16.01■□□□□ 0.15
SEMA3B-203ENST00000419007 SLC5A4Q9NY91 659 aa16.01■□□□□ 0.15
SEMA3B-203ENST00000419007 EURLQ9NYK6 297 aa16.01■□□□□ 0.15
SEMA3B-203ENST00000419007 LOXHD1Q8IVV2 1947 aa16.01■□□□□ 0.15
SEMA3B-203ENST00000419007 LRRIQ4A6NIV6 560 aa16.01■□□□□ 0.15
SEMA3B-203ENST00000419007 PLA2G6O60733 806 aa16.01■□□□□ 0.15
SEMA3B-203ENST00000419007 ZC3H11AO75152 810 aaKnown RBP eCLIP16.01■□□□□ 0.155e-7■■■■□ 23.3
SEMA3B-203ENST00000419007 NEFHP12036 1026 aa16.01■□□□□ 0.15
SEMA3B-203ENST00000419007 RAD23BP54727 409 aa16.01■□□□□ 0.15
SEMA3B-203ENST00000419007 NR1H3Q13133 447 aa16.01■□□□□ 0.15
SEMA3B-203ENST00000419007 EFTUD2Q15029 972 aaKnown RBP eCLIP16.01■□□□□ 0.158e-8■■■□□ 17.3
SEMA3B-203ENST00000419007 ZBTB41Q5SVQ8 909 aa16.01■□□□□ 0.15
SEMA3B-203ENST00000419007 MAB21L3Q8N8X9 362 aa16.01■□□□□ 0.15
SEMA3B-203ENST00000419007 UBN1Q9NPG3 1134 aa16.01■□□□□ 0.15
SEMA3B-203ENST00000419007 RBAKQ9NYW8 714 aaPredicted RBP16.01■□□□□ 0.15
SEMA3B-203ENST00000419007 EXTL3O43909 919 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 DCTN3O75935 186 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 UPP2O95045 317 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 GARTP22102 1010 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 SSTR1P30872 391 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 GAD2Q05329 585 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 PTP4A2Q12974 167 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 BAATQ14032 418 aaPredicted RBP16■□□□□ 0.15
SEMA3B-203ENST00000419007 CEP128Q6ZU80 1094 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 CENPUQ71F23 418 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 SPIRE2Q8WWL2 714 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 RBM41Q96IZ5 413 aaKnown RBP16■□□□□ 0.15
SEMA3B-203ENST00000419007 TTC25Q96NG3 672 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 SLITRK1Q96PX8 696 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 NUDCD1Q96RS6 583 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 TBC1D10AQ9BXI6 508 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 PXMP2Q9NR77 195 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 IP6K2Q9UHH9 426 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 ABHD2P08910 425 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 SKIV2L2P42285 1042 aaKnown RBP16■□□□□ 0.15
SEMA3B-203ENST00000419007 TAF1BQ53T94 588 aaPredicted RBP16■□□□□ 0.15
SEMA3B-203ENST00000419007 TAS1R3Q7RTX0 852 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 RCOR2Q8IZ40 523 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 UPF1Q92900 1129 aaKnown RBP eCLIP16■□□□□ 0.155e-9■■■■■ 29.1
SEMA3B-203ENST00000419007 ATP6V0A1Q93050 837 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 MAK16Q9BXY0 300 aaKnown RBP16■□□□□ 0.15
SEMA3B-203ENST00000419007 ZMYND8Q9ULU4 1186 aaPredicted RBP16■□□□□ 0.15
SEMA3B-203ENST00000419007 AGTPBP1Q9UPW5 1226 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 CNTNAP1P78357 1384 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 EDF1O60869 148 aaKnown RBP16■□□□□ 0.15
SEMA3B-203ENST00000419007 VNN1O95497 513 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 GCKP35557 465 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 YARSP54577 528 aaKnown RBP16■□□□□ 0.15
SEMA3B-203ENST00000419007 SESN3P58005 492 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 PDK4Q16654 411 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 SMTNL2Q2TAL5 461 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 EAPPQ56P03 285 aaPredicted RBP16■□□□□ 0.15
SEMA3B-203ENST00000419007 SCARA3Q6AZY7 606 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 XPNPEP1Q9NQW7 623 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 BATF3Q9NR55 127 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 SMG5Q9UPR3 1016 aaKnown RBP16■□□□□ 0.15
SEMA3B-203ENST00000419007 NUB1Q9Y5A7 615 aa16■□□□□ 0.15
SEMA3B-203ENST00000419007 ZBED4O75132 1171 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 ACO1P21399 889 aaKnown RBP15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 ADRA1DP25100 572 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 CCDC15Q0P6D6 951 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 TFDP1Q14186 410 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 FAM182AQ5T1J6 154 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 PLEKHA7Q6IQ23 1121 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 DNAJC24Q6P3W2 148 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 RSBN1LQ6PCB5 846 aaPredicted RBP15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 MTDHQ86UE4 582 aaKnown RBP15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 SAMD3Q8N6K7 520 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 FAM13CQ8NE31 585 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 DENND1AQ8TEH3 1009 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 CNKSR2Q8WXI2 1034 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 NTPCRQ9BSD7 190 aaKnown RBP15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 LRMDAQ9H2I8 198 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 ZFP69BQ9UJL9 534 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 A0A0G2JND7 137 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 C4BPAP04003 597 aaKnown RBP15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 PCK1P35558 622 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 PRKCEQ02156 737 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 HIF1AQ16665 826 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 SYCP2LQ5T4T6 812 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 TRIM72Q6ZMU5 477 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 SPOCD1Q6ZMY3 1216 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 OTOAQ7RTW8 1153 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 AGGF1Q8N302 714 aaeCLIP15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 ALLCQ8N6M5 410 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 MCPH1Q8NEM0 835 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 PYROXD1Q8WU10 500 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 ZWILCHQ9H900 591 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 ENTPD5O75356 428 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 DGAT1O75907 488 aa15.99■□□□□ 0.15
SEMA3B-203ENST00000419007 ATP5HO75947 161 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms