RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 ASS1P00966 412 aaKnown RBP20.03■□□□□ 0.8
PTCD3-204ENST00000418628 POU2F2P09086 479 aa20.03■□□□□ 0.8
PTCD3-204ENST00000418628 HOXA9P31269 272 aa20.03■□□□□ 0.8
PTCD3-204ENST00000418628 ITIH3Q06033 890 aa20.03■□□□□ 0.8
PTCD3-204ENST00000418628 NCOA4Q13772 614 aa20.03■□□□□ 0.8
PTCD3-204ENST00000418628 CLUL1Q15846 466 aa20.03■□□□□ 0.8
PTCD3-204ENST00000418628 TJAP1Q5JTD0 557 aa20.03■□□□□ 0.8
PTCD3-204ENST00000418628 PTCRAQ6ISU1 281 aaPredicted RBP20.03■□□□□ 0.8
PTCD3-204ENST00000418628 RTL10Q7L3V2 364 aa20.03■□□□□ 0.8
PTCD3-204ENST00000418628 OSTM1Q86WC4 334 aa20.03■□□□□ 0.8
PTCD3-204ENST00000418628 SYAP1Q96A49 352 aaPredicted RBP20.03■□□□□ 0.8
PTCD3-204ENST00000418628 ZNF707Q96C28 371 aaPredicted RBP20.03■□□□□ 0.8
PTCD3-204ENST00000418628 ADAM7Q9H2U9 754 aa20.03■□□□□ 0.8
PTCD3-204ENST00000418628 DPP7Q9UHL4 492 aa20.03■□□□□ 0.8
PTCD3-204ENST00000418628 USP15Q9Y4E8 981 aaPredicted RBP20.03■□□□□ 0.8
PTCD3-204ENST00000418628 ZMYND10O75800 440 aa20.02■□□□□ 0.8
PTCD3-204ENST00000418628 SPATA31D3P0C874 917 aa20.02■□□□□ 0.8
PTCD3-204ENST00000418628 IL9P15248 144 aa20.02■□□□□ 0.8
PTCD3-204ENST00000418628 ATF2P15336 505 aa20.02■□□□□ 0.8
PTCD3-204ENST00000418628 ERCC5P28715 1186 aaPredicted RBP20.02■□□□□ 0.8
PTCD3-204ENST00000418628 GCLMP48507 274 aa20.02■□□□□ 0.8
PTCD3-204ENST00000418628 GPR17Q13304 367 aa20.02■□□□□ 0.8
PTCD3-204ENST00000418628 BIRC3Q13489 604 aa20.02■□□□□ 0.8
PTCD3-204ENST00000418628 CT47A1Q5JQC4 288 aaPredicted RBP20.02■□□□□ 0.8
PTCD3-204ENST00000418628 SPATA31D4Q6ZUB0 917 aa20.02■□□□□ 0.8
PTCD3-204ENST00000418628 TCEAL8Q8IYN2 117 aa20.02■□□□□ 0.8
PTCD3-204ENST00000418628 TAS1R2Q8TE23 839 aa20.02■□□□□ 0.8
PTCD3-204ENST00000418628 TMEM209Q96SK2 561 aa20.02■□□□□ 0.8
PTCD3-204ENST00000418628 PKMYT1Q99640 499 aa20.02■□□□□ 0.8
PTCD3-204ENST00000418628 ZCWPW1Q9H0M4 648 aa20.02■□□□□ 0.8
PTCD3-204ENST00000418628 METTL14Q9HCE5 456 aaKnown RBP20.02■□□□□ 0.8
PTCD3-204ENST00000418628 ZDHHC7Q9NXF8 308 aa20.02■□□□□ 0.8
PTCD3-204ENST00000418628 ARMCX3Q9UH62 379 aaPredicted RBP20.02■□□□□ 0.8
PTCD3-204ENST00000418628 AFF4Q9UHB7 1163 aaKnown RBP20.02■□□□□ 0.8
PTCD3-204ENST00000418628 MAFFQ9ULX9 164 aa20.02■□□□□ 0.8
PTCD3-204ENST00000418628 NME7Q9Y5B8 376 aa20.02■□□□□ 0.8
PTCD3-204ENST00000418628 MYO16Q9Y6X6 1858 aa20.02■□□□□ 0.8
PTCD3-204ENST00000418628 MUC3AQ02505 3323 aa20.01■□□□□ 0.79
PTCD3-204ENST00000418628 PMM2O15305 246 aa20.01■□□□□ 0.79
PTCD3-204ENST00000418628 HUS1O60921 280 aa20.01■□□□□ 0.79
PTCD3-204ENST00000418628 TACC1O75410 805 aa20.01■□□□□ 0.79
PTCD3-204ENST00000418628 RFPL2O75678 378 aa20.01■□□□□ 0.79
PTCD3-204ENST00000418628 HLA-DRAP01903 254 aa20.01■□□□□ 0.79
PTCD3-204ENST00000418628 FAM163BP0C2L3 166 aa20.01■□□□□ 0.79
PTCD3-204ENST00000418628 MXI1P50539 228 aa20.01■□□□□ 0.79
PTCD3-204ENST00000418628 TRPC3Q13507 836 aa20.01■□□□□ 0.79
PTCD3-204ENST00000418628 KLHL40Q2TBA0 621 aa20.01■□□□□ 0.79
PTCD3-204ENST00000418628 ZNF699Q32M78 642 aa20.01■□□□□ 0.79
PTCD3-204ENST00000418628 KRT39Q6A163 491 aa20.01■□□□□ 0.79
PTCD3-204ENST00000418628 GPR149Q86SP6 731 aa20.01■□□□□ 0.79
PTCD3-204ENST00000418628 TRIM59Q8IWR1 403 aa20.01■□□□□ 0.79
PTCD3-204ENST00000418628 ADGRF2Q8IZF7 708 aa20.01■□□□□ 0.79
PTCD3-204ENST00000418628 C12orf76Q8N812 135 aaPredicted RBP20.01■□□□□ 0.79
PTCD3-204ENST00000418628 TAF4BQ92750 862 aa20.01■□□□□ 0.79
PTCD3-204ENST00000418628 CDH22Q9UJ99 828 aa20.01■□□□□ 0.79
PTCD3-204ENST00000418628 COQ4Q9Y3A0 265 aa20.01■□□□□ 0.79
PTCD3-204ENST00000418628 HELZP42694 1942 aaKnown RBP20.01■□□□□ 0.79
PTCD3-204ENST00000418628 C8AP07357 584 aa20■□□□□ 0.79
PTCD3-204ENST00000418628 OR4Q2P0C623 313 aa20■□□□□ 0.79
PTCD3-204ENST00000418628 WARSP23381 471 aaKnown RBP20■□□□□ 0.79
PTCD3-204ENST00000418628 UVSSAQ2YD98 709 aa20■□□□□ 0.79
PTCD3-204ENST00000418628 WDR72Q3MJ13 1102 aa20■□□□□ 0.79
PTCD3-204ENST00000418628 CBWD6Q4V339 395 aa20■□□□□ 0.79
PTCD3-204ENST00000418628 CBWD3Q5JTY5 395 aa20■□□□□ 0.79
PTCD3-204ENST00000418628 CBWD5Q5RIA9 395 aa20■□□□□ 0.79
PTCD3-204ENST00000418628 RARS2Q5T160 578 aaKnown RBP20■□□□□ 0.79
PTCD3-204ENST00000418628 ELMSAN1Q6PJG2 1045 aa20■□□□□ 0.79
PTCD3-204ENST00000418628 CYP26C1Q6V0L0 522 aa20■□□□□ 0.79
PTCD3-204ENST00000418628 RNF19BQ6ZMZ0 732 aa20■□□□□ 0.79
PTCD3-204ENST00000418628 METTL23Q86XA0 190 aa20■□□□□ 0.79
PTCD3-204ENST00000418628 IRF2BP1Q8IU81 584 aa20■□□□□ 0.79
PTCD3-204ENST00000418628 ACBD6Q9BR61 282 aa20■□□□□ 0.79
PTCD3-204ENST00000418628 SRRTQ9BXP5 876 aaKnown RBP20■□□□□ 0.79
PTCD3-204ENST00000418628 DACH1Q9UI36 760 aa20■□□□□ 0.79
PTCD3-204ENST00000418628 R3HCC1Q9Y3T6 440 aaKnown RBP20■□□□□ 0.79
PTCD3-204ENST00000418628 KIF26AQ9ULI4 1882 aaPredicted RBP19.99■□□□□ 0.79
PTCD3-204ENST00000418628 MTMR11A4FU01 709 aa19.99■□□□□ 0.79
PTCD3-204ENST00000418628 TULP1O00294 542 aaPredicted RBP19.99■□□□□ 0.79
PTCD3-204ENST00000418628 STX10O60499 249 aa19.99■□□□□ 0.79
PTCD3-204ENST00000418628 PHACTR2O75167 634 aa19.99■□□□□ 0.79
PTCD3-204ENST00000418628 SEC24AO95486 1093 aa19.99■□□□□ 0.79
PTCD3-204ENST00000418628 GNA14O95837 355 aa19.99■□□□□ 0.79
PTCD3-204ENST00000418628 HNRNPA1P09651 372 aaKnown RBP eCLIP19.99■□□□□ 0.79
PTCD3-204ENST00000418628 CPB1P15086 417 aa19.99■□□□□ 0.79
PTCD3-204ENST00000418628 PIK3CAP42336 1068 aa19.99■□□□□ 0.79
PTCD3-204ENST00000418628 SGSM1Q2NKQ1 1148 aa19.99■□□□□ 0.79
PTCD3-204ENST00000418628 LRRTM3Q86VH5 581 aa19.99■□□□□ 0.79
PTCD3-204ENST00000418628 SLC7A14Q8TBB6 771 aa19.99■□□□□ 0.79
PTCD3-204ENST00000418628 PRKD2Q9BZL6 878 aa19.99■□□□□ 0.79
PTCD3-204ENST00000418628 CRISPLD1Q9H336 500 aa19.99■□□□□ 0.79
PTCD3-204ENST00000418628 APOBEC3GQ9HC16 384 aaKnown RBP19.99■□□□□ 0.79
PTCD3-204ENST00000418628 HSFX1Q9UBD0 423 aa19.99■□□□□ 0.79
PTCD3-204ENST00000418628 POLIQ9UNA4 740 aa19.99■□□□□ 0.79
PTCD3-204ENST00000418628 FAM50BQ9Y247 325 aa19.99■□□□□ 0.79
PTCD3-204ENST00000418628 HCRTO43612 131 aa19.98■□□□□ 0.79
PTCD3-204ENST00000418628 LRRN2O75325 713 aa19.98■□□□□ 0.79
PTCD3-204ENST00000418628 ASPAP45381 313 aa19.98■□□□□ 0.79
PTCD3-204ENST00000418628 LHX1P48742 406 aa19.98■□□□□ 0.79
PTCD3-204ENST00000418628 NOP14P78316 857 aaKnown RBP19.98■□□□□ 0.79
PTCD3-204ENST00000418628 CBX2Q14781 532 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms