RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 MAN2B1O00754 1011 aa19.88■□□□□ 0.77
VPS16-204ENST00000417508 EXTL3O43909 919 aa19.88■□□□□ 0.77
VPS16-204ENST00000417508 CUTAO60888 179 aa19.88■□□□□ 0.77
VPS16-204ENST00000417508 GLULP15104 373 aa19.88■□□□□ 0.77
VPS16-204ENST00000417508 CASP5P51878 434 aa19.88■□□□□ 0.77
VPS16-204ENST00000417508 UBXN2BQ14CS0 331 aa19.88■□□□□ 0.77
VPS16-204ENST00000417508 ATL3Q6DD88 541 aa19.88■□□□□ 0.77
VPS16-204ENST00000417508 CNNM4Q6P4Q7 775 aa19.88■□□□□ 0.77
VPS16-204ENST00000417508 ASCL5Q7RTU5 278 aa19.88■□□□□ 0.77
VPS16-204ENST00000417508 MFSD6LQ8IWD5 586 aa19.88■□□□□ 0.77
VPS16-204ENST00000417508 DCP1BQ8IZD4 617 aaKnown RBP19.88■□□□□ 0.77
VPS16-204ENST00000417508 SHKBP1Q8TBC3 707 aa19.88■□□□□ 0.77
VPS16-204ENST00000417508 ZSCAN18Q8TBC5 510 aaPredicted RBP19.88■□□□□ 0.77
VPS16-204ENST00000417508 ZSWIM3Q96MP5 696 aa19.88■□□□□ 0.77
VPS16-204ENST00000417508 DNAJC25Q9H1X3 360 aa19.88■□□□□ 0.77
VPS16-204ENST00000417508 LTB4R2Q9NPC1 389 aa19.88■□□□□ 0.77
VPS16-204ENST00000417508 MLLT6P55198 1093 aaPredicted RBP19.87■□□□□ 0.77
VPS16-204ENST00000417508 TFAMQ00059 246 aaKnown RBP19.87■□□□□ 0.77
VPS16-204ENST00000417508 TEAD2Q15562 447 aa19.87■□□□□ 0.77
VPS16-204ENST00000417508 E2F4Q16254 413 aa19.87■□□□□ 0.77
VPS16-204ENST00000417508 SLC39A12Q504Y0 691 aa19.87■□□□□ 0.77
VPS16-204ENST00000417508 ZC3H14Q6PJT7 736 aaKnown RBP19.87■□□□□ 0.77
VPS16-204ENST00000417508 TPRG1Q6ZUI0 275 aa19.87■□□□□ 0.77
VPS16-204ENST00000417508 TMC8Q8IU68 726 aa19.87■□□□□ 0.77
VPS16-204ENST00000417508 HSCBQ8IWL3 235 aa19.87■□□□□ 0.77
VPS16-204ENST00000417508 OR10T2Q8NGX3 314 aa19.87■□□□□ 0.77
VPS16-204ENST00000417508 SPPL2BQ8TCT7 592 aa19.87■□□□□ 0.77
VPS16-204ENST00000417508 CLDN23Q96B33 292 aa19.87■□□□□ 0.77
VPS16-204ENST00000417508 SAAL1Q96ER3 474 aa19.87■□□□□ 0.77
VPS16-204ENST00000417508 TMEM209Q96SK2 561 aa19.87■□□□□ 0.77
VPS16-204ENST00000417508 SLITRK6Q9H5Y7 841 aa19.87■□□□□ 0.77
VPS16-204ENST00000417508 RBAKQ9NYW8 714 aaPredicted RBP19.87■□□□□ 0.77
VPS16-204ENST00000417508 PRPF6O94906 941 aaKnown RBP19.86■□□□□ 0.77
VPS16-204ENST00000417508 HSP90AA1P07900 732 aaKnown RBP19.86■□□□□ 0.77
VPS16-204ENST00000417508 WEE1P30291 646 aa19.86■□□□□ 0.77
VPS16-204ENST00000417508 RPS9P46781 194 aaKnown RBP19.86■□□□□ 0.77
VPS16-204ENST00000417508 VEPH1Q14D04 833 aa19.86■□□□□ 0.77
VPS16-204ENST00000417508 SURF1Q15526 300 aa19.86■□□□□ 0.77
VPS16-204ENST00000417508 WSCD1Q658N2 575 aa19.86■□□□□ 0.77
VPS16-204ENST00000417508 VITQ6UXI7 678 aa19.86■□□□□ 0.77
VPS16-204ENST00000417508 GPD1LQ8N335 351 aa19.86■□□□□ 0.77
VPS16-204ENST00000417508 LRRC52Q8N7C0 313 aa19.86■□□□□ 0.77
VPS16-204ENST00000417508 SPATA18Q8TC71 538 aa19.86■□□□□ 0.77
VPS16-204ENST00000417508 TRIM9Q9C026 710 aa19.86■□□□□ 0.77
VPS16-204ENST00000417508 MAGEF1Q9HAY2 307 aa19.86■□□□□ 0.77
VPS16-204ENST00000417508 KIAA1586Q9HCI6 787 aa19.86■□□□□ 0.77
VPS16-204ENST00000417508 ZNF334Q9HCZ1 680 aaPredicted RBP19.86■□□□□ 0.77
VPS16-204ENST00000417508 HEBP1Q9NRV9 189 aa19.86■□□□□ 0.77
VPS16-204ENST00000417508 ZMYM5Q9UJ78 669 aa19.86■□□□□ 0.77
VPS16-204ENST00000417508 ITGA11Q9UKX5 1188 aa19.86■□□□□ 0.77
VPS16-204ENST00000417508 AGAP1Q9UPQ3 857 aa19.86■□□□□ 0.77
VPS16-204ENST00000417508 MTF2Q9Y483 593 aaPredicted RBP19.86■□□□□ 0.77
VPS16-204ENST00000417508 A0A1W2PRU2 124 aa19.85■□□□□ 0.77
VPS16-204ENST00000417508 ZNF263O14978 683 aa19.85■□□□□ 0.77
VPS16-204ENST00000417508 HUS1O60921 280 aa19.85■□□□□ 0.77
VPS16-204ENST00000417508 SP9P0CG40 484 aa19.85■□□□□ 0.77
VPS16-204ENST00000417508 GJA1P17302 382 aa19.85■□□□□ 0.77
VPS16-204ENST00000417508 GDI1P31150 447 aa19.85■□□□□ 0.77
VPS16-204ENST00000417508 RBP5P82980 135 aa19.85■□□□□ 0.77
VPS16-204ENST00000417508 GRM2Q14416 872 aa19.85■□□□□ 0.77
VPS16-204ENST00000417508 ZNF528Q3MIS6 628 aa19.85■□□□□ 0.77
VPS16-204ENST00000417508 ARHGAP15Q53QZ3 475 aa19.85■□□□□ 0.77
VPS16-204ENST00000417508 TMEM86AQ8N2M4 240 aa19.85■□□□□ 0.77
VPS16-204ENST00000417508 CSGALNACT2Q8N6G5 542 aa19.85■□□□□ 0.77
VPS16-204ENST00000417508 C1orf127Q8N9H9 656 aa19.85■□□□□ 0.77
VPS16-204ENST00000417508 KCNG4Q8TDN1 519 aa19.85■□□□□ 0.77
VPS16-204ENST00000417508 CBWD1Q9BRT8 395 aa19.85■□□□□ 0.77
VPS16-204ENST00000417508 GDAP2Q9NXN4 497 aa19.85■□□□□ 0.77
VPS16-204ENST00000417508 OBP2AQ9NY56 170 aa19.85■□□□□ 0.77
VPS16-204ENST00000417508 FBXO4Q9UKT5 387 aa19.85■□□□□ 0.77
VPS16-204ENST00000417508 R3HCC1Q9Y3T6 440 aaKnown RBP19.85■□□□□ 0.77
VPS16-204ENST00000417508 EP300Q09472 2414 aaPredicted RBP19.84■□□□□ 0.77
VPS16-204ENST00000417508 TSC2P49815 1807 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 ZNF233A6NK53 670 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 HEPACAM2A8MVW5 462 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 NRG2O14511 850 aaPredicted RBP19.84■□□□□ 0.77
VPS16-204ENST00000417508 EIF3DO15371 548 aaKnown RBP eCLIP19.84■□□□□ 0.77
VPS16-204ENST00000417508 LAMTOR5O43504 91 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 LRRN2O75325 713 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 ZSCAN22P10073 491 aaPredicted RBP19.84■□□□□ 0.77
VPS16-204ENST00000417508 HAPLN1P10915 354 aaPredicted RBP19.84■□□□□ 0.77
VPS16-204ENST00000417508 CD72P21854 359 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 POLR2BP30876 1174 aaKnown RBP19.84■□□□□ 0.77
VPS16-204ENST00000417508 VIPR2P41587 438 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 SNRPFP62306 86 aaKnown RBP19.84■□□□□ 0.77
VPS16-204ENST00000417508 TSPY1Q01534 308 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 TAF12Q16514 161 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 NFE2Q16621 373 aaPredicted RBP19.84■□□□□ 0.77
VPS16-204ENST00000417508 MGAT5BQ3V5L5 792 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 C1orf228Q6PIY5 440 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 GAREM2Q75VX8 874 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 LRRTM3Q86VH5 581 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 ZNF507Q8TCN5 953 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 FAM200AQ8TCP9 573 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 DHX58Q96C10 678 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 SEPT5Q99719 369 aaPredicted RBP19.84■□□□□ 0.77
VPS16-204ENST00000417508 C7orf25Q9BPX7 421 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 ACBD6Q9BR61 282 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 FGFBP2Q9BYJ0 223 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 ATXN3LQ9H3M9 355 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms