RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 ZNF185O15231 689 aa18.08■□□□□ 0.48
CALD1-204ENST00000417172 CYP3A5P20815 502 aa18.08■□□□□ 0.48
CALD1-204ENST00000417172 CLCNKBP51801 687 aa18.08■□□□□ 0.48
CALD1-204ENST00000417172 CCL23P55773 120 aa18.08■□□□□ 0.48
CALD1-204ENST00000417172 GPC5P78333 572 aa18.08■□□□□ 0.48
CALD1-204ENST00000417172 CENPCQ03188 943 aa18.08■□□□□ 0.48
CALD1-204ENST00000417172 DENND1BQ6P3S1 775 aa18.08■□□□□ 0.48
CALD1-204ENST00000417172 ZNF598Q86UK7 904 aaKnown RBP18.08■□□□□ 0.48
CALD1-204ENST00000417172 C12orf29Q8N999 325 aa18.08■□□□□ 0.48
CALD1-204ENST00000417172 C1orf131Q8NDD1 294 aaKnown RBP18.08■□□□□ 0.48
CALD1-204ENST00000417172 C3orf58Q8NDZ4 430 aa18.08■□□□□ 0.48
CALD1-204ENST00000417172 TMEM176AQ96HP8 235 aa18.08■□□□□ 0.48
CALD1-204ENST00000417172 FAXDC2Q96IV6 333 aa18.08■□□□□ 0.48
CALD1-204ENST00000417172 C11orf70Q9BRQ4 267 aa18.08■□□□□ 0.48
CALD1-204ENST00000417172 PPP1R12CQ9BZL4 782 aa18.08■□□□□ 0.48
CALD1-204ENST00000417172 TSPYL2Q9H2G4 693 aaPredicted RBP18.08■□□□□ 0.48
CALD1-204ENST00000417172 BARX2Q9UMQ3 279 aaPredicted RBP18.08■□□□□ 0.48
CALD1-204ENST00000417172 UQCRHLA0A096LP55 91 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 UQCRHP07919 91 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 FGFR1P11362 822 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 LRPAP1P30533 357 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 CXCR5P32302 372 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 TAF6P49848 677 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 LILRA4P59901 499 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 FAAP100Q0VG06 881 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 BFSP2Q13515 415 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 MON1BQ7L1V2 547 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 MCOLN2Q8IZK6 566 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 WDTC1Q8N5D0 677 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 DBF4BQ8NFT6 615 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 KBTBD7Q8WVZ9 684 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 BTBD6Q96KE9 485 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 ZNF560Q96MR9 790 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 CARD6Q9BX69 1037 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 TLR10Q9BXR5 811 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 CTTNBP2NLQ9P2B4 639 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 JRKLQ9Y4A0 524 aa18.07■□□□□ 0.48
CALD1-204ENST00000417172 BUB1BO60566 1050 aaPredicted RBP18.06■□□□□ 0.48
CALD1-204ENST00000417172 RRM1P23921 792 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 NSFP46459 744 aaKnown RBP18.06■□□□□ 0.48
CALD1-204ENST00000417172 CDR1P51861 262 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 TLE2Q04725 743 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 NAA30Q147X3 362 aaPredicted RBP18.06■□□□□ 0.48
CALD1-204ENST00000417172 PAPD7Q5XG87 772 aaKnown RBP18.06■□□□□ 0.48
CALD1-204ENST00000417172 MMS22LQ6ZRQ5 1243 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 HEXIM2Q96MH2 286 aaKnown RBP18.06■□□□□ 0.48
CALD1-204ENST00000417172 TSPAN18Q96SJ8 248 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 WNT8AQ9H1J5 351 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 DPEP3Q9H4B8 488 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 CNOT8Q9UFF9 292 aaKnown RBP18.06■□□□□ 0.48
CALD1-204ENST00000417172 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.06■□□□□ 0.48
CALD1-204ENST00000417172 L1RE1Q9UN81 338 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 V9GYY5 206 aaPredicted RBP18.06■□□□□ 0.48
CALD1-204ENST00000417172 PAEPP09466 180 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 PAN2Q504Q3 1202 aaKnown RBP18.06■□□□□ 0.48
CALD1-204ENST00000417172 ANKRD33Q7Z3H0 272 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 DAAM2Q86T65 1068 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 ACOT1Q86TX2 421 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 CPNE8Q86YQ8 564 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 OR6B3Q8NGW1 331 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 ARMC5Q96C12 935 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 CAPZA3Q96KX2 299 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 NUP85Q9BW27 656 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 TRIM7Q9C029 511 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 HIPK3Q9H422 1215 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 TJP2Q9UDY2 1190 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 CYTH4Q9UIA0 394 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 CDC23Q9UJX2 597 aa18.06■□□□□ 0.48
CALD1-204ENST00000417172 F8W810 466 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 PITPNM1O00562 1244 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 PODXLO00592 558 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 B4GALT3O60512 393 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 GJB6O95452 261 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 CYP1A2P05177 515 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 HSPA1AP0DMV8 641 aaKnown RBP18.05■□□□□ 0.48
CALD1-204ENST00000417172 HSPA1BP0DMV9 641 aaKnown RBP18.05■□□□□ 0.48
CALD1-204ENST00000417172 COL6A1P12109 1028 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 LMO2P25791 158 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 CYP2C18P33260 490 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 PTP4A2Q12974 167 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 SV2CQ496J9 727 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 GLIPR1L2Q4G1C9 344 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 PLEKHG4Q58EX7 1191 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 CLLU1OSQ5K130 101 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 TRIM72Q6ZMU5 477 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 SLC24A5Q71RS6 500 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 PGBD4Q96DM1 585 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 NT5C1AQ9BXI3 368 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 FAM49BQ9NUQ9 324 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 SLC38A7Q9NVC3 462 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 GDAP2Q9NXN4 497 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 GTF3C4Q9UKN8 822 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 ATP11BQ9Y2G3 1177 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 SAR1BQ9Y6B6 198 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 TSC2P49815 1807 aa18.05■□□□□ 0.48
CALD1-204ENST00000417172 TMEM110-MUSTN1A8MSY1 372 aa18.04■□□□□ 0.48
CALD1-204ENST00000417172 PDGFRBP09619 1106 aa18.04■□□□□ 0.48
CALD1-204ENST00000417172 PNPLA4P41247 253 aa18.04■□□□□ 0.48
CALD1-204ENST00000417172 CCDC142Q17RM4 750 aa18.04■□□□□ 0.48
CALD1-204ENST00000417172 MEI1Q5TIA1 1274 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms