RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 MLF2Q15773 248 aaPredicted RBP16.32■□□□□ 0.2
UBXN4-203ENST00000416538 LMBRD2Q68DH5 695 aaPredicted RBP16.32■□□□□ 0.2
UBXN4-203ENST00000416538 LRRTM3Q86VH5 581 aa16.32■□□□□ 0.2
UBXN4-203ENST00000416538 SPRYD3Q8NCJ5 442 aa16.32■□□□□ 0.2
UBXN4-203ENST00000416538 ZNF396Q96N95 335 aaPredicted RBP16.32■□□□□ 0.2
UBXN4-203ENST00000416538 MKNK1Q9BUB5 465 aa16.32■□□□□ 0.2
UBXN4-203ENST00000416538 ZCWPW1Q9H0M4 648 aa16.32■□□□□ 0.2
UBXN4-203ENST00000416538 PCIF1Q9H4Z3 704 aa16.32■□□□□ 0.2
UBXN4-203ENST00000416538 ASAH2Q9NR71 780 aa16.32■□□□□ 0.2
UBXN4-203ENST00000416538 RBAKQ9NYW8 714 aaPredicted RBP16.32■□□□□ 0.2
UBXN4-203ENST00000416538 SIX4Q9UIU6 781 aa16.32■□□□□ 0.2
UBXN4-203ENST00000416538 MAFFQ9ULX9 164 aa16.32■□□□□ 0.2
UBXN4-203ENST00000416538 EXOC7Q9UPT5 735 aa16.32■□□□□ 0.2
UBXN4-203ENST00000416538 MTF2Q9Y483 593 aaPredicted RBP16.32■□□□□ 0.2
UBXN4-203ENST00000416538 PROB1E7EW31 1015 aa16.31■□□□□ 0.2
UBXN4-203ENST00000416538 CYB561D2O14569 222 aa16.31■□□□□ 0.2
UBXN4-203ENST00000416538 HCRTO43612 131 aa16.31■□□□□ 0.2
UBXN4-203ENST00000416538 IL18RAPO95256 599 aa16.31■□□□□ 0.2
UBXN4-203ENST00000416538 ITGB3P05106 788 aa16.31■□□□□ 0.2
UBXN4-203ENST00000416538 CD72P21854 359 aa16.31■□□□□ 0.2
UBXN4-203ENST00000416538 POLR2BP30876 1174 aaKnown RBP16.31■□□□□ 0.2
UBXN4-203ENST00000416538 TFAMQ00059 246 aaKnown RBP16.31■□□□□ 0.2
UBXN4-203ENST00000416538 ALCAMQ13740 583 aa16.31■□□□□ 0.2
UBXN4-203ENST00000416538 VITQ6UXI7 678 aa16.31■□□□□ 0.2
UBXN4-203ENST00000416538 EPM2AIP1Q7L775 607 aaPredicted RBP16.31■□□□□ 0.2
UBXN4-203ENST00000416538 ASCL5Q7RTU5 278 aa16.31■□□□□ 0.2
UBXN4-203ENST00000416538 FRMD5Q7Z6J6 570 aa16.31■□□□□ 0.2
UBXN4-203ENST00000416538 ELSPBP1Q96BH3 223 aa16.31■□□□□ 0.2
UBXN4-203ENST00000416538 LPIN3Q9BQK8 851 aa16.31■□□□□ 0.2
UBXN4-203ENST00000416538 PDE11AQ9HCR9 933 aa16.31■□□□□ 0.2
UBXN4-203ENST00000416538 TMLHEQ9NVH6 421 aa16.31■□□□□ 0.2
UBXN4-203ENST00000416538 PCDHA7Q9UN72 937 aa16.31■□□□□ 0.2
UBXN4-203ENST00000416538 PCDHB13Q9Y5F0 798 aa16.31■□□□□ 0.2
UBXN4-203ENST00000416538 PTPRZ1P23471 2315 aaPredicted RBP16.31■□□□□ 0.2
UBXN4-203ENST00000416538 A0A1W2PRU2 124 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 STK25O00506 426 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 EXTL3O43909 919 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 GFRA3O60609 400 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 MICAL2O94851 1124 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 VIPR2P41587 438 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 ASIC1P78348 528 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 DNM1Q05193 864 aaKnown RBP16.3■□□□□ 0.2
UBXN4-203ENST00000416538 SLC39A12Q504Y0 691 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 ARMCX5Q6P1M9 558 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 CNNM4Q6P4Q7 775 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 GAREM2Q75VX8 874 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 NT5DC4Q86YG4 428 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 CBWD2Q8IUF1 395 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 CCDC65Q8IXS2 484 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 SYCP3Q8IZU3 236 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 ELMOD1Q8N336 334 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 STKLD1Q8NE28 680 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 ZNF512Q96ME7 567 aaPredicted RBP16.3■□□□□ 0.2
UBXN4-203ENST00000416538 OXCT2Q9BYC2 517 aaPredicted RBP16.3■□□□□ 0.2
UBXN4-203ENST00000416538 MTMR12Q9C0I1 747 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 BLZF1Q9H2G9 400 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 HEBP1Q9NRV9 189 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 L1RE1Q9UN81 338 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 OTOGLQ3ZCN5 2332 aa16.3■□□□□ 0.2
UBXN4-203ENST00000416538 PRR23AA6NEV1 266 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 KPNA7A9QM74 516 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 ZNF197O14709 1029 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 RFX1P22670 979 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 TARSP26639 723 aaKnown RBP16.29■□□□□ 0.2
UBXN4-203ENST00000416538 SV2CQ496J9 727 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 SLC44A4Q53GD3 710 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 CYP4A22Q5TCH4 519 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 RESP18Q5W5W9 173 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 IQCEQ6IPM2 695 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 TPRG1Q6ZUI0 275 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 OSTM1Q86WC4 334 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 GRAMD1CQ8IYS0 662 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 GPD1LQ8N335 351 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 PDCL2Q8N4E4 241 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 OR5B17Q8NGF7 314 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 ZSCAN18Q8TBC5 510 aaPredicted RBP16.29■□□□□ 0.2
UBXN4-203ENST00000416538 NOC3LQ8WTT2 800 aaKnown RBP16.29■□□□□ 0.2
UBXN4-203ENST00000416538 SMARCD2Q92925 531 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 ZNF560Q96MR9 790 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 CUEDC2Q9H467 287 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 IL21Q9HBE4 155 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 SIT1Q9Y3P8 196 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 CFAP54Q96N23 3096 aa16.29■□□□□ 0.2
UBXN4-203ENST00000416538 GPR179Q6PRD1 2367 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 KANSL1LA0AUZ9 987 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 POLR2DO15514 142 aaKnown RBP16.28■□□□□ 0.2
UBXN4-203ENST00000416538 TGFB1I1O43294 461 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 GPR15P49685 360 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 FAM26FQ5R3K3 315 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 DNAJB7Q7Z6W7 309 aaPredicted RBP16.28■□□□□ 0.2
UBXN4-203ENST00000416538 GPIHBP1Q8IV16 184 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 MAML2Q8IZL2 1156 aaPredicted RBP16.28■□□□□ 0.2
UBXN4-203ENST00000416538 LEMD2Q8NC56 503 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 KCNG4Q8TDN1 519 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 SCFD1Q8WVM8 642 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 PSMG2Q969U7 264 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 PKMYT1Q99640 499 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 SEPT5Q99719 369 aaPredicted RBP16.28■□□□□ 0.2
UBXN4-203ENST00000416538 C7orf25Q9BPX7 421 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 GZF1Q9H116 711 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms