RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 GRK4P32298 578 aa12.32□□□□□ -0.44
RFFL-205ENST00000415395 HSD17B3P37058 310 aa12.32□□□□□ -0.44
RFFL-205ENST00000415395 BPIFB4P59827 614 aa12.32□□□□□ -0.44
RFFL-205ENST00000415395 NOP14P78316 857 aaKnown RBP12.32□□□□□ -0.44
RFFL-205ENST00000415395 MRPS6P82932 125 aaKnown RBP12.32□□□□□ -0.44
RFFL-205ENST00000415395 TMEM62Q0P6H9 643 aa12.32□□□□□ -0.44
RFFL-205ENST00000415395 SGSM1Q2NKQ1 1148 aa12.32□□□□□ -0.44
RFFL-205ENST00000415395 GDF6Q6KF10 455 aaPredicted RBP12.32□□□□□ -0.44
RFFL-205ENST00000415395 SLFN11Q7Z7L1 901 aa12.32□□□□□ -0.44
RFFL-205ENST00000415395 CDR2LQ86X02 465 aaPredicted RBP12.32□□□□□ -0.44
RFFL-205ENST00000415395 SH2D3CQ8N5H7 860 aa12.32□□□□□ -0.44
RFFL-205ENST00000415395 SLC30A5Q8TAD4 765 aa12.32□□□□□ -0.44
RFFL-205ENST00000415395 MYCBPAPQ8TBZ2 947 aa12.32□□□□□ -0.44
RFFL-205ENST00000415395 TATDN2Q93075 761 aa12.32□□□□□ -0.44
RFFL-205ENST00000415395 FAM212AQ96EL1 285 aa12.32□□□□□ -0.44
RFFL-205ENST00000415395 TACO1Q9BSH4 297 aaKnown RBP12.32□□□□□ -0.44
RFFL-205ENST00000415395 MTMR12Q9C0I1 747 aa12.32□□□□□ -0.44
RFFL-205ENST00000415395 GINS2Q9Y248 185 aa12.32□□□□□ -0.44
RFFL-205ENST00000415395 TRPV2Q9Y5S1 764 aa12.32□□□□□ -0.44
RFFL-205ENST00000415395 BHMG1C9JSJ3 638 aaPredicted RBP12.31□□□□□ -0.44
RFFL-205ENST00000415395 E7EVH7 732 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 SART1O43290 800 aaKnown RBP12.31□□□□□ -0.44
RFFL-205ENST00000415395 HSPA6P17066 643 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 TRPC3Q13507 836 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 CUL2Q13617 745 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 SLC10A6Q3KNW5 377 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 ODF2Q5BJF6 829 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 TTC19Q6DKK2 380 aaPredicted RBP12.31□□□□□ -0.44
RFFL-205ENST00000415395 CCDC121Q6ZUS5 278 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 DAAM2Q86T65 1068 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 CCDC50Q8IVM0 306 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 KAT5Q92993 513 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 CCT8L2Q96SF2 557 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 PACSIN1Q9BY11 444 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 SEZ6LQ9BYH1 1024 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 CDHR5Q9HBB8 845 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 PACSIN2Q9UNF0 486 aaPredicted RBP12.31□□□□□ -0.44
RFFL-205ENST00000415395 CNTN6Q9UQ52 1028 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 CAPN7Q9Y6W3 813 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 NCANO14594 1321 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 GMNCA6NCL1 334 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 FAM187AA6NFU0 413 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 LACTBL1A8MY62 500 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 ANKRD65E5RJM6 399 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 DDX3XO00571 662 aaKnown RBP eCLIP12.31□□□□□ -0.441e-14■■■□□ 16.5
RFFL-205ENST00000415395 CAND2O75155 1236 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 TMEM253P0C7T8 217 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 TNFAIP3P21580 790 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 ATICP31939 592 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 PDE6CP51160 858 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 OSTNP61366 133 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 PPP2R2AP63151 447 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 TFAMQ00059 246 aaKnown RBP12.31□□□□□ -0.44
RFFL-205ENST00000415395 GUCY1A3Q02108 690 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 ZNF677Q86XU0 584 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 GPIHBP1Q8IV16 184 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 TMEM192Q8IY95 271 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 OLIG1Q8TAK6 271 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 EPS8L1Q8TE68 723 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 UBLCP1Q8WVY7 318 aaPredicted RBP12.31□□□□□ -0.44
RFFL-205ENST00000415395 CTNNBL1Q8WYA6 563 aaPredicted RBP12.31□□□□□ -0.44
RFFL-205ENST00000415395 RUNDC3BQ96NL0 473 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 AGPAT1Q99943 283 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 PI4K2AQ9BTU6 479 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 STMN4Q9H169 189 aaPredicted RBP12.31□□□□□ -0.44
RFFL-205ENST00000415395 CENPHQ9H3R5 247 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 FAM124BQ9H5Z6 455 aaPredicted RBP12.31□□□□□ -0.44
RFFL-205ENST00000415395 VRTNQ9H8Y1 702 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 TRIP11Q15643 1979 aa12.31□□□□□ -0.44
RFFL-205ENST00000415395 ZSCAN5CA6NGD5 496 aaPredicted RBP12.3□□□□□ -0.44
RFFL-205ENST00000415395 NPTXRO95502 500 aa12.3□□□□□ -0.44
RFFL-205ENST00000415395 STAU1O95793 577 aaKnown RBP12.3□□□□□ -0.44
RFFL-205ENST00000415395 PAEPP09466 180 aa12.3□□□□□ -0.44
RFFL-205ENST00000415395 FGFR4P22455 802 aa12.3□□□□□ -0.44
RFFL-205ENST00000415395 MNAT1P51948 309 aa12.3□□□□□ -0.44
RFFL-205ENST00000415395 ACLYP53396 1101 aa12.3□□□□□ -0.44
RFFL-205ENST00000415395 YARSP54577 528 aaKnown RBP12.3□□□□□ -0.44
RFFL-205ENST00000415395 YWHAEP62258 255 aaKnown RBP12.3□□□□□ -0.44
RFFL-205ENST00000415395 IFFO1Q0D2I5 559 aa12.3□□□□□ -0.44
RFFL-205ENST00000415395 PTK7Q13308 1070 aa12.3□□□□□ -0.44
RFFL-205ENST00000415395 DHX34Q14147 1143 aaKnown RBP12.3□□□□□ -0.44
RFFL-205ENST00000415395 TMEM132DQ14C87 1099 aa12.3□□□□□ -0.44
RFFL-205ENST00000415395 FAM47CQ5HY64 1035 aa12.3□□□□□ -0.44
RFFL-205ENST00000415395 RNF187Q5TA31 235 aaPredicted RBP12.3□□□□□ -0.44
RFFL-205ENST00000415395 ARRDC4Q8NCT1 418 aa12.3□□□□□ -0.44
RFFL-205ENST00000415395 LNX1Q8TBB1 728 aaPredicted RBP12.3□□□□□ -0.44
RFFL-205ENST00000415395 PPP1R13LQ8WUF5 828 aa12.3□□□□□ -0.44
RFFL-205ENST00000415395 TMEM40Q8WWA1 233 aa12.3□□□□□ -0.44
RFFL-205ENST00000415395 RFFLQ8WZ73 363 aa12.3□□□□□ -0.44
RFFL-205ENST00000415395 SEC14L1Q92503 715 aa12.3□□□□□ -0.44
RFFL-205ENST00000415395 HES6Q96HZ4 224 aa12.3□□□□□ -0.44
RFFL-205ENST00000415395 GLT1D1Q96MS3 346 aa12.3□□□□□ -0.44
RFFL-205ENST00000415395 BEGAINQ9BUH8 593 aa12.3□□□□□ -0.44
RFFL-205ENST00000415395 TRIM6Q9C030 488 aaPredicted RBP12.3□□□□□ -0.44
RFFL-205ENST00000415395 NIF3L1Q9GZT8 377 aa12.3□□□□□ -0.44
RFFL-205ENST00000415395 APOBEC3GQ9HC16 384 aaKnown RBP12.3□□□□□ -0.44
RFFL-205ENST00000415395 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.3□□□□□ -0.44
RFFL-205ENST00000415395 PARP2Q9UGN5 583 aa12.3□□□□□ -0.44
RFFL-205ENST00000415395 NOCTQ9UK39 431 aaKnown RBP12.3□□□□□ -0.44
RFFL-205ENST00000415395 ITGA11Q9UKX5 1188 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms