RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 ZSCAN30Q86W11 494 aa10.34□□□□□ -0.75
RIF1-202ENST00000414861 OSTM1Q86WC4 334 aa10.34□□□□□ -0.75
RIF1-202ENST00000414861 TMEM173Q86WV6 379 aaPredicted RBP10.34□□□□□ -0.75
RIF1-202ENST00000414861 DNAAF5Q86Y56 855 aa10.34□□□□□ -0.75
RIF1-202ENST00000414861 GLYCTKQ8IVS8 523 aa10.34□□□□□ -0.75
RIF1-202ENST00000414861 LRRC43Q8N309 656 aa10.34□□□□□ -0.75
RIF1-202ENST00000414861 SLC4A11Q8NBS3 891 aa10.34□□□□□ -0.75
RIF1-202ENST00000414861 DEF6Q9H4E7 631 aa10.34□□□□□ -0.75
RIF1-202ENST00000414861 TIMM13Q9Y5L4 95 aaPredicted RBP10.34□□□□□ -0.75
RIF1-202ENST00000414861 BZW2Q9Y6E2 419 aaKnown RBP10.34□□□□□ -0.75
RIF1-202ENST00000414861 AKR1B10O60218 316 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 FGBP02675 491 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 BRD2P25440 801 aaKnown RBP10.33□□□□□ -0.76
RIF1-202ENST00000414861 GNA15P30679 374 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 KCNJ6P48051 423 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 SLC11A1P49279 550 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 FMO1Q01740 532 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 CCDC170Q8IYT3 715 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 ADGRF2Q8IZF7 708 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 APPL2Q8NEU8 664 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 TFAP2BQ92481 460 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 ZNF689Q96CS4 500 aaPredicted RBP10.33□□□□□ -0.76
RIF1-202ENST00000414861 FAM193BQ96PV7 902 aaPredicted RBP10.33□□□□□ -0.76
RIF1-202ENST00000414861 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.33□□□□□ -0.76
RIF1-202ENST00000414861 MRPL9Q9BYD2 267 aaKnown RBP10.33□□□□□ -0.76
RIF1-202ENST00000414861 DPEP3Q9H4B8 488 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 MARCH5Q9NX47 278 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 BARX2Q9UMQ3 279 aaPredicted RBP10.33□□□□□ -0.76
RIF1-202ENST00000414861 TFR2Q9UP52 801 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 ADGRG1Q9Y653 693 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 MYH10P35580 1976 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 CHD7Q9P2D1 2997 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 HUS1O60921 280 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 CCDC172P0C7W6 258 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 LMO2P25791 158 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 BCAR1P56945 870 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 YWHAEP62258 255 aaKnown RBP10.33□□□□□ -0.76
RIF1-202ENST00000414861 CCDC142Q17RM4 750 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 PSRC1Q6PGN9 363 aaPredicted RBP10.33□□□□□ -0.76
RIF1-202ENST00000414861 FMNL3Q8IVF7 1028 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 TNS4Q8IZW8 715 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 TOP6BLQ8N6T0 577 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 BCL7CQ8WUZ0 217 aaPredicted RBP10.33□□□□□ -0.76
RIF1-202ENST00000414861 PCDHB18PQ96TA0 734 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 AGPAT1Q99943 283 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 LPIN3Q9BQK8 851 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 CWH43Q9H720 699 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 TAS2R14Q9NYV8 317 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 NENFQ9UMX5 172 aa10.33□□□□□ -0.76
RIF1-202ENST00000414861 EIF3CLB5ME19 914 aaKnown RBP10.32□□□□□ -0.76
RIF1-202ENST00000414861 NT5C1B-RDH14C9J2C7 533 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 NRP1O14786 923 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 TACC1O75410 805 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 LCA5LO95447 670 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 CYLC1P35663 651 aaPredicted RBP10.32□□□□□ -0.76
RIF1-202ENST00000414861 SLC18A3Q16572 532 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 DCLRE1AQ6PJP8 1040 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 DSTYKQ6XUX3 929 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 OR6B3Q8NGW1 331 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 SLC30A5Q8TAD4 765 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 RSPH1Q8WYR4 309 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 EIF3CQ99613 913 aaKnown RBP10.32□□□□□ -0.76
RIF1-202ENST00000414861 SEPT11Q9NVA2 429 aaKnown RBP10.32□□□□□ -0.76
RIF1-202ENST00000414861 RNF216Q9NWF9 866 aaPredicted RBP10.32□□□□□ -0.76
RIF1-202ENST00000414861 TRMT1Q9NXH9 659 aaKnown RBP10.32□□□□□ -0.76
RIF1-202ENST00000414861 PUF60Q9UHX1 559 aaKnown RBP10.32□□□□□ -0.76
RIF1-202ENST00000414861 PPP2R2CQ9Y2T4 447 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 TMEM189-UBE2V1I3L0A0 370 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 M0QZQ0 153 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 THAP12O43422 761 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 GALTP07902 379 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 ACAT1P24752 427 aaKnown RBP10.32□□□□□ -0.76
RIF1-202ENST00000414861 CDR2Q01850 454 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 BMS1Q14692 1282 aaKnown RBP10.32□□□□□ -0.76
RIF1-202ENST00000414861 ACOT1Q86TX2 421 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 C12orf29Q8N999 325 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 TMEM176AQ96HP8 235 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 SUSD3Q96L08 255 aa10.32□□□□□ -0.76
RIF1-202ENST00000414861 GBF1Q92538 1859 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 PDE4DIPQ5VU43 2346 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 TNRC18O15417 2968 aaPredicted RBP10.31□□□□□ -0.76
RIF1-202ENST00000414861 RCCD1A6NED2 376 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 GABRDO14764 452 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 GJB5O95377 273 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 PDGFRBP09619 1106 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 CD19P15391 556 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 WARSP23381 471 aaKnown RBP10.31□□□□□ -0.76
RIF1-202ENST00000414861 CDR1P51861 262 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 PASD1Q8IV76 773 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 CCAR2Q8N163 923 aaKnown RBP10.31□□□□□ -0.76
RIF1-202ENST00000414861 ZNF606Q8WXB4 792 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 HERVK_113Q902F9 699 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 YME1L1Q96TA2 773 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 LBHD1Q9BQE6 289 aaPredicted RBP10.31□□□□□ -0.76
RIF1-202ENST00000414861 RTP3Q9BQQ7 232 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 NT5C1AQ9BXI3 368 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 PACSIN1Q9BY11 444 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 FAM124BQ9H5Z6 455 aaPredicted RBP10.31□□□□□ -0.76
RIF1-202ENST00000414861 NAGPAQ9UK23 515 aa10.31□□□□□ -0.76
RIF1-202ENST00000414861 STXBP5LQ9Y2K9 1186 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms