RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 DGKIO75912 1065 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 CD44P16070 742 aaKnown RBP9.96□□□□□ -0.82
SNHG3-201ENST00000413987 FERP16591 822 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 CCT6AP40227 531 aaKnown RBP9.96□□□□□ -0.82
SNHG3-201ENST00000413987 VAV2P52735 878 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 CLNS1AP54105 237 aaKnown RBP9.96□□□□□ -0.82
SNHG3-201ENST00000413987 SARNPP82979 210 aaKnown RBP9.96□□□□□ -0.82
SNHG3-201ENST00000413987 C2orf54Q08AI8 447 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 DHCR24Q15392 516 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 ZNF174Q15697 407 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 PKN3Q6P5Z2 889 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 C6orf89Q6UWU4 347 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 PDZD4Q76G19 769 aaPredicted RBP9.96□□□□□ -0.82
SNHG3-201ENST00000413987 ARMC9Q7Z3E5 817 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 GRAMD1CQ8IYS0 662 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 IPMKQ8NFU5 416 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 TRIM58Q8NG06 486 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 SUN5Q8TC36 379 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 ARL8AQ96BM9 186 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 CHP1Q99653 195 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 CENPHQ9H3R5 247 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 SH2D4AQ9H788 454 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 EHMT1Q9H9B1 1298 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 KRT82Q9NSB4 513 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 QPCTLQ9NXS2 382 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 COG5Q9UP83 839 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 GIT1Q9Y2X7 761 aa9.96□□□□□ -0.82
SNHG3-201ENST00000413987 NOSIPQ9Y314 301 aaKnown RBP9.96□□□□□ -0.82
SNHG3-201ENST00000413987 NDC80O14777 642 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 USO1O60763 962 aaKnown RBP9.95□□□□□ -0.82
SNHG3-201ENST00000413987 SLITRK5O94991 958 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 CELF2O95319 508 aaKnown RBP9.95□□□□□ -0.82
SNHG3-201ENST00000413987 BMP15O95972 392 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 TCP1P17987 556 aaKnown RBP9.95□□□□□ -0.82
SNHG3-201ENST00000413987 MDH1P40925 334 aaKnown RBP9.95□□□□□ -0.82
SNHG3-201ENST00000413987 HERVK_113P62684 666 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 MLLT1Q03111 559 aaPredicted RBP9.95□□□□□ -0.82
SNHG3-201ENST00000413987 PRPF4BQ13523 1007 aaKnown RBP9.95□□□□□ -0.82
SNHG3-201ENST00000413987 TCP11X2Q5H9J9 407 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 TTC19Q6DKK2 380 aaPredicted RBP9.95□□□□□ -0.82
SNHG3-201ENST00000413987 CEP57Q86XR8 500 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 DEPTORQ8TB45 409 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 MYCBPAPQ8TBZ2 947 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 OPTNQ96CV9 577 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 ATG4CQ96DT6 458 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 PAGE5Q96GU1 130 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 NUP58Q9BVL2 599 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 VPS16Q9H269 839 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 PLSCR4Q9NRQ2 329 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 INTS7Q9NVH2 962 aaKnown RBP9.95□□□□□ -0.82
SNHG3-201ENST00000413987 TRIM10Q9UDY6 481 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 CAPN11Q9UMQ6 739 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 SNX12Q9UMY4 172 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 DNM3Q9UQ16 869 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 KCNJ18B7U540 433 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 PDE2AO00408 941 aaPredicted RBP9.95□□□□□ -0.82
SNHG3-201ENST00000413987 TPP1O14773 563 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 RTN2O75298 545 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 TACC1O75410 805 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 LTFP02788 710 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 ARAFP10398 606 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 NR1D1P20393 614 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 CD9P21926 228 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 L1CAMP32004 1257 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 MCM7P33993 719 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 SKIV2L2P42285 1042 aaKnown RBP9.95□□□□□ -0.82
SNHG3-201ENST00000413987 AP2B1P63010 937 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 IL1RL1Q01638 556 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 KIF5AQ12840 1032 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 KCNJ12Q14500 433 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 OASLQ15646 514 aaKnown RBP9.95□□□□□ -0.82
SNHG3-201ENST00000413987 C5orf22Q49AR2 442 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 FNDC3BQ53EP0 1204 aaKnown RBP9.95□□□□□ -0.82
SNHG3-201ENST00000413987 NOL9Q5SY16 702 aaKnown RBP9.95□□□□□ -0.82
SNHG3-201ENST00000413987 CYB5D1Q6P9G0 228 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 FBXO11Q86XK2 927 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 IFT20Q8IY31 132 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 FUKQ8N0W3 1084 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 MREGQ8N565 214 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 CCDC155Q8N6L0 562 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 ZIM3Q96PE6 472 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 FAM193BQ96PV7 902 aaPredicted RBP9.95□□□□□ -0.82
SNHG3-201ENST00000413987 WDR18Q9BV38 432 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 SPATA9Q9BWV2 254 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 RAVER2Q9HCJ3 691 aaKnown RBP9.95□□□□□ -0.82
SNHG3-201ENST00000413987 CTNND2Q9UQB3 1225 aa9.95□□□□□ -0.82
SNHG3-201ENST00000413987 PLD2O14939 933 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 WDR46O15213 610 aaKnown RBP9.94□□□□□ -0.82
SNHG3-201ENST00000413987 GREM1O60565 184 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 PAFAH1B1P43034 410 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 ADCY7P51828 1080 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 PAK1Q13153 545 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 PCBP1Q15365 356 aaKnown RBP eCLIP9.94□□□□□ -0.82
SNHG3-201ENST00000413987 MMEL1Q495T6 779 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 KAZNQ674X7 775 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 GADL1Q6ZQY3 521 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 CREG2Q8IUH2 290 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 REXO1Q8N1G1 1221 aaKnown RBP9.94□□□□□ -0.82
SNHG3-201ENST00000413987 LRRC43Q8N309 656 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 ESX1Q8N693 406 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms