RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 FAM180AQ6UWF9 173 aa2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 TECPR1Q7Z6L1 1165 aa2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 RSPH3Q86UC2 560 aa2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 B3GALNT2Q8NCR0 500 aa2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 NLGN4YQ8NFZ3 816 aaPredicted RBP2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 RPL36ALQ969Q0 106 aaKnown RBP2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 RGMAQ96B86 450 aa2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 CLPTM1LQ96KA5 538 aa2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 FCRL4Q96PJ5 515 aa2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 C1orf43Q9BWL3 253 aa2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 BRIP1Q9BX63 1249 aa2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 ACTRT3Q9BYD9 372 aa2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 CAAP1Q9H8G2 361 aa2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 MANSC1Q9H8J5 431 aa2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 PDGFCQ9NRA1 345 aa2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 SERTAD4Q9NUC0 356 aa2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 TDP1Q9NUW8 608 aa2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 ZBTB21Q9ULJ3 1066 aa2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 LRP12Q9Y561 859 aa2.1□□□□□ -2.07
RNU2-55P-201ENST00000411146 TCF20Q9UGU0 1960 aaKnown RBP2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 A0A0B4J269 797 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 SMIM35A0A1B0GVV1 85 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 CCDC151A5D8V7 595 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 FAM171A2A8MVW0 826 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 NT5C1B-RDH14C9J2C7 533 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 PRRT4C9JH25 899 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 POLRMTO00411 1230 aaKnown RBP2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 TTLL1O95922 423 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 MTHFD1P11586 935 aaKnown RBP2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 ZFXP17010 805 aaPredicted RBP2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 ARHGAP25P42331 645 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 WASP42768 502 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 NDUFV1P49821 464 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 SLC5A3P53794 718 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 LINC00205P59089 165 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 CDC42EP1Q00587 391 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 TUBB3Q13509 450 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 HLXQ14774 488 aaPredicted RBP2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 ODF1Q14990 250 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 CLUL1Q15846 466 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 SLC44A4Q53GD3 710 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 RBM20Q5T481 1227 aaKnown RBP2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 PRAMEF17Q5VTA0 474 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 KIAA1614Q5VZ46 1190 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 ZNF365Q70YC5 407 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 MAVSQ7Z434 540 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 NEK8Q86SG6 692 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 CHSY1Q86X52 802 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 PSD4Q8NDX1 1056 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 WDR66Q8TBY9 1149 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 FKBP10Q96AY3 582 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 PBKQ96KB5 322 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 WACQ9BTA9 647 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 TPSD1Q9BZJ3 242 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 CCDC8Q9H0W5 538 aaPredicted RBP2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 SLAMF7Q9NQ25 335 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 DLL3Q9NYJ7 618 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 ELOVL5Q9NYP7 299 aa2.09□□□□□ -2.07
RNU2-55P-201ENST00000411146 PHLDB1Q86UU1 1377 aa2.09□□□□□ -2.08
RNU2-55P-201ENST00000411146 FER1L4A9Z1Z3 1794 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 ZNF785A8K8V0 405 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 KCNU1A8MYU2 1149 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 H0YIZ8 118 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 PPP6CO00743 305 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 BRINP1O60477 761 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 URI1O94763 535 aaPredicted RBP2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 PDE8BO95263 885 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 MT-CO1P00395 513 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 FAM163BP0C2L3 166 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 HOXB6P17509 224 aaKnown RBP2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 MALP21145 153 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 NR4A2P43354 598 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 FXR1P51114 621 aaKnown RBP eCLIP2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 CLCN2P51788 898 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 ZNF134P52741 427 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 FOXG1P55316 489 aaPredicted RBP2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 SOX10P56693 466 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 NXPH1P58417 271 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 CYP4F2P78329 520 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 POU6F2P78424 691 aaPredicted RBP2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 SLC10A2Q12908 348 aaPredicted RBP2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 KLF1Q13351 362 aaPredicted RBP2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 PCBP2Q15366 365 aaKnown RBP eCLIP2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 GPR162Q16538 588 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 ZNF260Q3ZCT1 412 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 FAM153CQ494X1 144 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 CCDC93Q567U6 631 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 GIMAP6Q6P9H5 292 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 PGM2L1Q6PCE3 622 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 CRELD2Q6UXH1 353 aaPredicted RBP2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 NAPRTQ6XQN6 538 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 KLHDC4Q8TBB5 520 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 CHAC2Q8WUX2 184 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 COA7Q96BR5 231 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 ZC3H10Q96K80 434 aaKnown RBP2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 PACSIN1Q9BY11 444 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 ARHGEF3Q9NR81 526 aa2.08□□□□□ -2.08
RNU2-55P-201ENST00000411146 CYSRT1A8MQ03 144 aa2.07□□□□□ -2.08
RNU2-55P-201ENST00000411146 FZD9O00144 591 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms