RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 TUT1Q9H6E5 874 aaKnown RBP14.41□□□□□ -0.1
LIMS1-205ENST00000410093 DERAQ9Y315 318 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 RALGAPA2Q2PPJ7 1873 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 SRRM3A6NNA2 597 aaPredicted RBP14.41□□□□□ -0.1
LIMS1-205ENST00000410093 ECEL1O95672 775 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 GAS8O95995 478 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 HSD17B3P37058 310 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 CLCN3P51790 818 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 AGBL2Q5U5Z8 902 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 MTHFD1LQ6UB35 978 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 GPR142Q7Z601 462 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 CCDC105Q8IYK2 499 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 RCOR2Q8IZ40 523 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 NIPA2Q8N8Q9 360 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 CCHCR1Q8TD31 782 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 MAML3Q96JK9 1138 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 C16orf70Q9BSU1 422 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 PLEKHA5Q9HAU0 1116 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 DDX56Q9NY93 547 aaKnown RBP14.41□□□□□ -0.1
LIMS1-205ENST00000410093 WHRNQ9P202 907 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 SRRDQ9UH36 339 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 ITGA11Q9UKX5 1188 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 TNPO2O14787 897 aaKnown RBP14.4□□□□□ -0.1
LIMS1-205ENST00000410093 TLR3O15455 904 aaKnown RBP14.4□□□□□ -0.1
LIMS1-205ENST00000410093 STAG3L1P0CL83 205 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 PTPN7P35236 360 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 ACAP1Q15027 740 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 STILQ15468 1287 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 SGO2Q562F6 1265 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 HOOK3Q86VS8 718 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 THNSL1Q8IYQ7 743 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 C3orf20Q8ND61 904 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 FNIP1Q8TF40 1166 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 AFG1LQ8WV93 481 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 PIK3R5Q8WYR1 880 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 ARMC5Q96C12 935 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 FAM212AQ96EL1 285 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 DDX27Q96GQ7 796 aaKnown RBP14.4□□□□□ -0.1
LIMS1-205ENST00000410093 ATP6V1G3Q96LB4 118 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 HINFPQ9BQA5 517 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 C11orf70Q9BRQ4 267 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 TINF2Q9BSI4 451 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 TXLNGYQ9BZA5 131 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 DNAI2Q9GZS0 605 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 ERVK-5Q9HDB9 667 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 ZDHHC18Q9NUE0 388 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 AKT3Q9Y243 479 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 PLAAQ9Y263 795 aa14.4□□□□□ -0.1
LIMS1-205ENST00000410093 CITO14578 2027 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 TMEM191CA6NGB0 347 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 TTLL13PA6NNM8 815 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 SNAI1O95863 264 aaPredicted RBP14.39□□□□□ -0.11
LIMS1-205ENST00000410093 NUDT17P0C025 328 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 RARAP10276 462 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 ITIH2P19823 946 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 ASPAP45381 313 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 MARCKSL1P49006 195 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 CDR1P51861 262 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 CAP1Q01518 475 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 DHX9Q08211 1270 aaKnown RBP14.39□□□□□ -0.11
LIMS1-205ENST00000410093 CALCOCO2Q13137 446 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 ACVR2BQ13705 512 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 SIX1Q15475 284 aaPredicted RBP14.39□□□□□ -0.11
LIMS1-205ENST00000410093 CCNG2Q16589 344 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 AMHR2Q16671 573 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 DNAJC24Q6P3W2 148 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 KDM7AQ6ZMT4 941 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 MMS22LQ6ZRQ5 1243 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 ERICH1Q86X53 443 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 ATL2Q8NHH9 583 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 TRAPPC12Q8WVT3 735 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 FRMD8P1Q9BZ68 369 aaPredicted RBP14.39□□□□□ -0.11
LIMS1-205ENST00000410093 CELF4Q9BZC1 486 aaKnown RBP14.39□□□□□ -0.11
LIMS1-205ENST00000410093 FOXP3Q9BZS1 431 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 PDZD7Q9H5P4 517 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 TMBIM4Q9HC24 238 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 EFR3BQ9Y2G0 817 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 NR2E1Q9Y466 385 aa14.39□□□□□ -0.11
LIMS1-205ENST00000410093 UMODL1Q5DID0 1318 aa14.38□□□□□ -0.11
LIMS1-205ENST00000410093 MGAMO43451 1857 aa14.38□□□□□ -0.11
LIMS1-205ENST00000410093 A0A1B0GUA9 196 aa14.38□□□□□ -0.11
LIMS1-205ENST00000410093 MMP3P08254 477 aa14.38□□□□□ -0.11
LIMS1-205ENST00000410093 WEE2P0C1S8 567 aa14.38□□□□□ -0.11
LIMS1-205ENST00000410093 AXLP30530 894 aa14.38□□□□□ -0.11
LIMS1-205ENST00000410093 GRIK4Q16099 956 aa14.38□□□□□ -0.11
LIMS1-205ENST00000410093 SEZ6Q53EL9 994 aa14.38□□□□□ -0.11
LIMS1-205ENST00000410093 DRICH1Q6PGQ1 229 aaPredicted RBP14.38□□□□□ -0.11
LIMS1-205ENST00000410093 POLNQ7Z5Q5 900 aa14.38□□□□□ -0.11
LIMS1-205ENST00000410093 OR6J1Q8NGC5 347 aa14.38□□□□□ -0.11
LIMS1-205ENST00000410093 RIN2Q8WYP3 895 aaPredicted RBP14.38□□□□□ -0.11
LIMS1-205ENST00000410093 C18orf8Q96DM3 657 aa14.38□□□□□ -0.11
LIMS1-205ENST00000410093 BTBD6Q96KE9 485 aa14.38□□□□□ -0.11
LIMS1-205ENST00000410093 ACAP3Q96P50 834 aa14.38□□□□□ -0.11
LIMS1-205ENST00000410093 CAPS2Q9BXY5 557 aa14.38□□□□□ -0.11
LIMS1-205ENST00000410093 PABPC3Q9H361 631 aaKnown RBP14.38□□□□□ -0.11
LIMS1-205ENST00000410093 NRCAMQ92823 1304 aa14.38□□□□□ -0.11
LIMS1-205ENST00000410093 A0A087WZ62 844 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 TCRBV5S1A1TA0A578 114 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 LACTBL1A8MY62 500 aa14.37□□□□□ -0.11
LIMS1-205ENST00000410093 H0YGN5 161 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms