RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 ALG13Q9NP73 1137 aaKnown RBP16.28■□□□□ 0.2
LSM5-207ENST00000410044 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.28■□□□□ 0.2
LSM5-207ENST00000410044 FAM207AQ9NSI2 230 aaPredicted RBP16.28■□□□□ 0.2
LSM5-207ENST00000410044 BACE2Q9Y5Z0 518 aa16.28■□□□□ 0.2
LSM5-207ENST00000410044 TSC2P49815 1807 aa16.28■□□□□ 0.2
LSM5-207ENST00000410044 H7C4K7 107 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 FSCN2O14926 492 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 EPHB6O15197 1021 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 GRM6O15303 877 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 WEE2P0C1S8 567 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 CDC25BP30305 580 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 GNL1P36915 607 aaPredicted RBP16.27■□□□□ 0.2
LSM5-207ENST00000410044 GLUD2P49448 558 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 YWHAHQ04917 246 aaPredicted RBP16.27■□□□□ 0.2
LSM5-207ENST00000410044 RTP2Q5QGT7 225 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 VARS2Q5ST30 1063 aaKnown RBP16.27■□□□□ 0.2
LSM5-207ENST00000410044 SPECC1LQ69YQ0 1117 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 OVOS1Q6IE37 1185 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 IQCEQ6IPM2 695 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 GJB7Q6PEY0 223 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 ADGRF2Q8IZF7 708 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 CRYBG2Q8N1P7 616 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 WHAMMQ8TF30 809 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 SHC3Q92529 594 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 KAT5Q92993 513 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 PCMTD1Q96MG8 357 aaPredicted RBP16.27■□□□□ 0.2
LSM5-207ENST00000410044 ARID3AQ99856 593 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 RTP3Q9BQQ7 232 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 ACBD6Q9BR61 282 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 ZNF576Q9H609 170 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 SMYD3Q9H7B4 428 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 RXFP1Q9HBX9 757 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 CISHQ9NSE2 258 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 CEP72Q9P209 647 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 MYO6Q9UM54 1294 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 BARX2Q9UMQ3 279 aaPredicted RBP16.27■□□□□ 0.2
LSM5-207ENST00000410044 STXBP5LQ9Y2K9 1186 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.27■□□□□ 0.25e-7■■□□□ 14.2
LSM5-207ENST00000410044 TIMM13Q9Y5L4 95 aaPredicted RBP16.27■□□□□ 0.2
LSM5-207ENST00000410044 FHOD1Q9Y613 1164 aa16.27■□□□□ 0.2
LSM5-207ENST00000410044 RANBP2P49792 3224 aaKnown RBP16.26■□□□□ 0.19
LSM5-207ENST00000410044 A0A1W2PQJ5 194 aa16.26■□□□□ 0.19
LSM5-207ENST00000410044 CILPO75339 1184 aa16.26■□□□□ 0.19
LSM5-207ENST00000410044 DNAJB1P25685 340 aa16.26■□□□□ 0.19
LSM5-207ENST00000410044 JAM2P57087 298 aa16.26■□□□□ 0.19
LSM5-207ENST00000410044 ERVFC1P60507 584 aa16.26■□□□□ 0.19
LSM5-207ENST00000410044 POLR2FP61218 127 aaKnown RBP16.26■□□□□ 0.19
LSM5-207ENST00000410044 BMS1Q14692 1282 aaKnown RBP16.26■□□□□ 0.19
LSM5-207ENST00000410044 PTPN21Q16825 1174 aa16.26■□□□□ 0.19
LSM5-207ENST00000410044 GPR153Q6NV75 609 aa16.26■□□□□ 0.19
LSM5-207ENST00000410044 OSTM1Q86WC4 334 aa16.26■□□□□ 0.19
LSM5-207ENST00000410044 CEP57Q86XR8 500 aa16.26■□□□□ 0.19
LSM5-207ENST00000410044 THEM5Q8N1Q8 247 aa16.26■□□□□ 0.19
LSM5-207ENST00000410044 GPR88Q9GZN0 384 aa16.26■□□□□ 0.19
LSM5-207ENST00000410044 NGRNQ9NPE2 291 aaKnown RBP16.26■□□□□ 0.19
LSM5-207ENST00000410044 TLR9Q9NR96 1032 aa16.26■□□□□ 0.19
LSM5-207ENST00000410044 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.26■□□□□ 0.19
LSM5-207ENST00000410044 FNIP2Q9P278 1114 aa16.26■□□□□ 0.19
LSM5-207ENST00000410044 AJAP1Q9UKB5 411 aaPredicted RBP16.26■□□□□ 0.19
LSM5-207ENST00000410044 MTUS1Q9ULD2 1270 aa16.26■□□□□ 0.19
LSM5-207ENST00000410044 NME7Q9Y5B8 376 aa16.26■□□□□ 0.19
LSM5-207ENST00000410044 LAMA2P24043 3122 aaKnown RBP16.25■□□□□ 0.19
LSM5-207ENST00000410044 OR6C75A6NL08 312 aa16.25■□□□□ 0.19
LSM5-207ENST00000410044 LPXNO60711 386 aa16.25■□□□□ 0.19
LSM5-207ENST00000410044 ADCY5O95622 1261 aa16.25■□□□□ 0.19
LSM5-207ENST00000410044 URODP06132 367 aa16.25■□□□□ 0.19
LSM5-207ENST00000410044 TRIM21P19474 475 aaKnown RBP16.25■□□□□ 0.19
LSM5-207ENST00000410044 LMO2P25791 158 aa16.25■□□□□ 0.19
LSM5-207ENST00000410044 RAP1GAPP47736 663 aa16.25■□□□□ 0.19
LSM5-207ENST00000410044 TBX2Q13207 712 aaPredicted RBP16.25■□□□□ 0.19
LSM5-207ENST00000410044 TRIM14Q14142 442 aa16.25■□□□□ 0.19
LSM5-207ENST00000410044 DRAP1Q14919 205 aaPredicted RBP16.25■□□□□ 0.19
LSM5-207ENST00000410044 KIAA1841Q6NSI8 718 aa16.25■□□□□ 0.19
LSM5-207ENST00000410044 SCARA5Q6ZMJ2 495 aa16.25■□□□□ 0.19
LSM5-207ENST00000410044 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.25■□□□□ 0.19
LSM5-207ENST00000410044 FAM71AQ8IYT1 594 aa16.25■□□□□ 0.19
LSM5-207ENST00000410044 MRPL43Q8N983 215 aaKnown RBP16.25■□□□□ 0.19
LSM5-207ENST00000410044 OR6B3Q8NGW1 331 aa16.25■□□□□ 0.19
LSM5-207ENST00000410044 ARNTL2Q8WYA1 636 aa16.25■□□□□ 0.19
LSM5-207ENST00000410044 RIN2Q8WYP3 895 aaPredicted RBP16.25■□□□□ 0.19
LSM5-207ENST00000410044 BAP1Q92560 729 aa16.25■□□□□ 0.19
LSM5-207ENST00000410044 B3GALT6Q96L58 329 aa16.25■□□□□ 0.19
LSM5-207ENST00000410044 SNX25Q9H3E2 840 aa16.25■□□□□ 0.19
LSM5-207ENST00000410044 CERS4Q9HA82 394 aa16.25■□□□□ 0.19
LSM5-207ENST00000410044 MRPL17Q9NRX2 175 aaKnown RBP16.25■□□□□ 0.19
LSM5-207ENST00000410044 DDX43Q9NXZ2 648 aaKnown RBP16.25■□□□□ 0.19
LSM5-207ENST00000410044 MTRRQ9UBK8 725 aa16.25■□□□□ 0.19
LSM5-207ENST00000410044 CDH9Q9ULB4 789 aa16.25■□□□□ 0.19
LSM5-207ENST00000410044 CAPN11Q9UMQ6 739 aa16.25■□□□□ 0.19
LSM5-207ENST00000410044 EPOPA6NHQ4 379 aa16.24■□□□□ 0.19
LSM5-207ENST00000410044 RNF225M0QZC1 329 aaPredicted RBP16.24■□□□□ 0.19
LSM5-207ENST00000410044 FOXN3O00409 490 aaPredicted RBP16.24■□□□□ 0.19
LSM5-207ENST00000410044 SOX1O00570 391 aaPredicted RBP16.24■□□□□ 0.19
LSM5-207ENST00000410044 CXCL14O95715 111 aa16.24■□□□□ 0.19
LSM5-207ENST00000410044 C1RP00736 705 aa16.24■□□□□ 0.19
LSM5-207ENST00000410044 PCSK1P29120 753 aa16.24■□□□□ 0.19
LSM5-207ENST00000410044 ZNF132P52740 706 aa16.24■□□□□ 0.19
LSM5-207ENST00000410044 NDST1P52848 882 aa16.24■□□□□ 0.19
LSM5-207ENST00000410044 CREMQ03060 361 aa16.24■□□□□ 0.19
LSM5-207ENST00000410044 PTPN14Q15678 1187 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms