RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 WNT8AQ9H1J5 351 aa13.27□□□□□ -0.29
CHMP3-204ENST00000409727 ISCUQ9H1K1 167 aa13.27□□□□□ -0.29
CHMP3-204ENST00000409727 GOLPH3Q9H4A6 298 aa13.27□□□□□ -0.29
CHMP3-204ENST00000409727 C11orf49Q9H6J7 331 aa13.27□□□□□ -0.29
CHMP3-204ENST00000409727 INTUQ9ULD6 942 aa13.27□□□□□ -0.29
CHMP3-204ENST00000409727 BARX2Q9UMQ3 279 aaPredicted RBP13.27□□□□□ -0.29
CHMP3-204ENST00000409727 PODXLO00592 558 aa13.26□□□□□ -0.29
CHMP3-204ENST00000409727 RIOK3O14730 519 aaKnown RBP13.26□□□□□ -0.29
CHMP3-204ENST00000409727 ATP1A1P05023 1023 aaKnown RBP13.26□□□□□ -0.29
CHMP3-204ENST00000409727 GZMAP12544 262 aa13.26□□□□□ -0.29
CHMP3-204ENST00000409727 LRPAP1P30533 357 aa13.26□□□□□ -0.29
CHMP3-204ENST00000409727 PNPLA4P41247 253 aa13.26□□□□□ -0.29
CHMP3-204ENST00000409727 NSFP46459 744 aaKnown RBP13.26□□□□□ -0.29
CHMP3-204ENST00000409727 TCTN1Q2MV58 587 aa13.26□□□□□ -0.29
CHMP3-204ENST00000409727 PLEKHG4Q58EX7 1191 aa13.26□□□□□ -0.29
CHMP3-204ENST00000409727 ZNF598Q86UK7 904 aaKnown RBP13.26□□□□□ -0.29
CHMP3-204ENST00000409727 RNF10Q8N5U6 811 aaKnown RBP13.26□□□□□ -0.29
CHMP3-204ENST00000409727 SLC35G2Q8TBE7 412 aa13.26□□□□□ -0.29
CHMP3-204ENST00000409727 SEPT8Q92599 483 aa13.26□□□□□ -0.29
CHMP3-204ENST00000409727 ZNF653Q96CK0 615 aa13.26□□□□□ -0.29
CHMP3-204ENST00000409727 FAXDC2Q96IV6 333 aa13.26□□□□□ -0.29
CHMP3-204ENST00000409727 FTHL17Q9BXU8 183 aa13.26□□□□□ -0.29
CHMP3-204ENST00000409727 TMEM39AQ9NV64 488 aa13.26□□□□□ -0.29
CHMP3-204ENST00000409727 FTCDO95954 541 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 UNGP13051 313 aaPredicted RBP13.25□□□□□ -0.29
CHMP3-204ENST00000409727 DNA2P51530 1060 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 INCA1Q0VD86 236 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 LRRC26Q2I0M4 334 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 GLB1LQ6UWU2 654 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 ACOT1Q86TX2 421 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 C1orf131Q8NDD1 294 aaKnown RBP13.25□□□□□ -0.29
CHMP3-204ENST00000409727 APPL2Q8NEU8 664 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 HASPINQ8TF76 798 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 TMEM106CQ9BVX2 250 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 NT5C1AQ9BXI3 368 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 UBN1Q9NPG3 1134 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 CTTNBP2NLQ9P2B4 639 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 SCN5AQ14524 2016 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 GRID2IPA4D2P6 1211 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 BTNL10A8MVZ5 291 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 ENPP3O14638 875 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 NCK2O43639 380 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 HUS1O60921 280 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 CYP1A1P04798 512 aaPredicted RBP13.25□□□□□ -0.29
CHMP3-204ENST00000409727 PAEPP09466 180 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 PDGFRBP09619 1106 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 CDR1P51861 262 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 NOMO3P69849 1222 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 GPC5P78333 572 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 CLLU1OSQ5K130 101 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 LLGL2Q6P1M3 1020 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 DENND1BQ6P3S1 775 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 TRIM72Q6ZMU5 477 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 C12orf29Q8N999 325 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 C3orf58Q8NDZ4 430 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 RFFLQ8WZ73 363 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 TOX2Q96NM4 488 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 LPIN3Q9BQK8 851 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 C11orf70Q9BRQ4 267 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 DPEP3Q9H4B8 488 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 PRDM5Q9NQX1 630 aaPredicted RBP13.25□□□□□ -0.29
CHMP3-204ENST00000409727 L1RE1Q9UN81 338 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 COG5Q9UP83 839 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 NME7Q9Y5B8 376 aa13.25□□□□□ -0.29
CHMP3-204ENST00000409727 A8MXQ7 604 aa13.24□□□□□ -0.29
CHMP3-204ENST00000409727 I3L4J1 428 aa13.24□□□□□ -0.29
CHMP3-204ENST00000409727 CYB561D2O14569 222 aa13.24□□□□□ -0.29
CHMP3-204ENST00000409727 MED7O43513 233 aa13.24□□□□□ -0.29
CHMP3-204ENST00000409727 EOMESO95936 686 aa13.24□□□□□ -0.29
CHMP3-204ENST00000409727 LMO2P25791 158 aa13.24□□□□□ -0.29
CHMP3-204ENST00000409727 GRIK3Q13003 919 aa13.24□□□□□ -0.29
CHMP3-204ENST00000409727 UPP1Q16831 310 aa13.24□□□□□ -0.29
CHMP3-204ENST00000409727 MMS22LQ6ZRQ5 1243 aa13.24□□□□□ -0.29
CHMP3-204ENST00000409727 ADGRF2Q8IZF7 708 aa13.24□□□□□ -0.29
CHMP3-204ENST00000409727 PSMB7Q99436 277 aa13.24□□□□□ -0.29
CHMP3-204ENST00000409727 SNX25Q9H3E2 840 aa13.24□□□□□ -0.29
CHMP3-204ENST00000409727 FAM49BQ9NUQ9 324 aa13.24□□□□□ -0.29
CHMP3-204ENST00000409727 GDAP2Q9NXN4 497 aa13.24□□□□□ -0.29
CHMP3-204ENST00000409727 CNOT8Q9UFF9 292 aaKnown RBP13.24□□□□□ -0.29
CHMP3-204ENST00000409727 PACSIN2Q9UNF0 486 aaPredicted RBP13.24□□□□□ -0.29
CHMP3-204ENST00000409727 PCDHB7Q9Y5E2 793 aa13.24□□□□□ -0.29
CHMP3-204ENST00000409727 TIMM13Q9Y5L4 95 aaPredicted RBP13.24□□□□□ -0.29
CHMP3-204ENST00000409727 NCANO14594 1321 aa13.24□□□□□ -0.29
CHMP3-204ENST00000409727 TMEM110-MUSTN1A8MSY1 372 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 SRGAP2O75044 1071 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 B3GAT3O94766 335 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 CLTBP09497 229 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 GNL1P36915 607 aaPredicted RBP13.23□□□□□ -0.29
CHMP3-204ENST00000409727 FAM189BP81408 668 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 CENPCQ03188 943 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 RNASELQ05823 741 aaKnown RBP13.23□□□□□ -0.29
CHMP3-204ENST00000409727 SGO2Q562F6 1265 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 WSCD1Q658N2 575 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 DSTYKQ6XUX3 929 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 DAAM2Q86T65 1068 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 MCOLN2Q8IZK6 566 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 PDCL2Q8N4E4 241 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 ANKLE1Q8NAG6 615 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 TPCN2Q8NHX9 752 aa13.23□□□□□ -0.29
CHMP3-204ENST00000409727 KBTBD7Q8WVZ9 684 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms