RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 PDE4DIPQ5VU43 2346 aa17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 HABP4Q5JVS0 413 aaKnown RBP17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 KDM7AQ6ZMT4 941 aa17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 CDKL3Q8IVW4 592 aaPredicted RBP17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 TMBIM4Q9HC24 238 aa17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 A1CFQ9NQ94 594 aaKnown RBP17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 ABCF3Q9NUQ8 709 aa17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 PCMTD2Q9NV79 361 aa17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 ARL2BPQ9Y2Y0 163 aa17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 NAMPTP43490 491 aa17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 GRAMD1BQ3KR37 738 aa17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 CCDC60Q8IWA6 550 aaPredicted RBP17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 MYCBPQ99417 103 aaPredicted RBP17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 BCAS3Q9H6U6 928 aa17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 CCL15-CCL14A0A0B4J2E2 113 aa17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 GARTP22102 1010 aa17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 CTCFP49711 727 aaPredicted RBP17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 CCL15Q16663 113 aa17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 OR6P1Q8NGX9 317 aa17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 GANQ9H2C0 597 aa17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 C10orf88Q9H8K7 445 aa17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 PRMT7Q9NVM4 692 aaPredicted RBP17.3■□□□□ 0.36
PTPRN2-205ENST00000409483 PJA2O43164 708 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 RARAP10276 462 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 FNTAP49354 379 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 APPL2Q8NEU8 664 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 AENQ8WTP8 325 aaKnown RBP17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 KCTD10Q9H3F6 313 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 WDR35Q9P2L0 1181 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 A0A087WZ62 844 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 TNPO2O14787 897 aaKnown RBP17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 TRPA1O75762 1119 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 ADRB2P07550 413 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 GNAT1P11488 350 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 GCLCP48506 637 aaPredicted RBP17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 SNRPFP62306 86 aaKnown RBP17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 MAP3K21Q5TCX8 1036 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 LVRNQ6Q4G3 990 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 SYDE1Q6ZW31 735 aaPredicted RBP17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 ANKRD13AQ8IZ07 590 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 FDXACB1Q9BRP7 624 aaPredicted RBP17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 RPL21P46778 160 aaKnown RBP17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 PTENP60484 403 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 PTK7Q13308 1070 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 ART3Q13508 389 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 TRPM8Q7Z2W7 1104 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 ZNF677Q86XU0 584 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 DTX3LQ8TDB6 740 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 GTSE1Q9NYZ3 720 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 PSMC3IPQ9P2W1 217 aaPredicted RBP17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 KIF1AQ12756 1690 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 NOL3O60936 208 aaKnown RBP17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 OTUD4Q01804 1114 aaKnown RBP17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 SNAPC2Q13487 334 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 TAF1BQ53T94 588 aaPredicted RBP17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 LNX1Q8TBB1 728 aaPredicted RBP17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 TNIP3Q96KP6 325 aa17.29■□□□□ 0.36
PTPRN2-205ENST00000409483 SPECC1L-ADORA2AF8WAN1 911 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 MAP2K7O14733 419 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 TGFB1I1O43294 461 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 MROH9Q5TGP6 573 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 BBS5Q8N3I7 341 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 AFG1LQ8WV93 481 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 HSD17B14Q9BPX1 270 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 PCDHGC5Q9Y5F6 944 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 ALDH18A1P54886 795 aaKnown RBP17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 COPS2P61201 443 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 IFI35P80217 286 aaPredicted RBP17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 CLEC16AQ2KHT3 1053 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 TMC2Q8TDI7 906 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 ZNF606Q8WXB4 792 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 ZNF560Q96MR9 790 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 SPON2Q9BUD6 331 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 MED1Q15648 1581 aaPredicted RBP17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 ZNF286BP0CG31 522 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 KRT4P19013 534 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 GPD1P21695 349 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 OCRLQ01968 901 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 TAF1CQ15572 869 aaPredicted RBP17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 PAN2Q504Q3 1202 aaKnown RBP17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 TRIM67Q6ZTA4 783 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 RASSF3Q86WH2 238 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 MCOLN2Q8IZK6 566 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 A0A0A6YYK5 440 aaPredicted RBP17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 TLR2O60603 784 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 PROSCO94903 275 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 MUTP22033 750 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 CORO7P57737 925 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 AMPD2Q01433 879 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 TMCO4Q5TGY1 634 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 C1orf146Q5VVC0 180 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 RANBP17Q9H2T7 1088 aaKnown RBP17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 BCAP29Q9UHQ4 241 aa17.28■□□□□ 0.36
PTPRN2-205ENST00000409483 H3BRJ5 948 aa17.27■□□□□ 0.36
PTPRN2-205ENST00000409483 CPA2P48052 419 aa17.27■□□□□ 0.36
PTPRN2-205ENST00000409483 TPI1P60174 286 aa17.27■□□□□ 0.36
PTPRN2-205ENST00000409483 STX1BP61266 288 aa17.27■□□□□ 0.36
PTPRN2-205ENST00000409483 ZNF200P98182 395 aaPredicted RBP17.27■□□□□ 0.36
PTPRN2-205ENST00000409483 GPRC5AQ8NFJ5 357 aa17.27■□□□□ 0.36
PTPRN2-205ENST00000409483 RMDN2Q96LZ7 410 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms