RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 GCLMP48507 274 aa21.31■■□□□ 1
PDLIM2-207ENST00000409417 NLRP12P59046 1061 aa21.31■■□□□ 1
PDLIM2-207ENST00000409417 UVSSAQ2YD98 709 aa21.31■■□□□ 1
PDLIM2-207ENST00000409417 WDR72Q3MJ13 1102 aa21.31■■□□□ 1
PDLIM2-207ENST00000409417 RTP3Q9BQQ7 232 aa21.31■■□□□ 1
PDLIM2-207ENST00000409417 RHOBTB2Q9BYZ6 727 aa21.31■■□□□ 1
PDLIM2-207ENST00000409417 METTL14Q9HCE5 456 aaKnown RBP21.31■■□□□ 1
PDLIM2-207ENST00000409417 PLXNA3P51805 1871 aa21.3■■□□□ 1
PDLIM2-207ENST00000409417 C5orf42Q9H799 3197 aa21.3■■□□□ 1
PDLIM2-207ENST00000409417 CPB1P15086 417 aa21.3■■□□□ 1
PDLIM2-207ENST00000409417 GPR17Q13304 367 aa21.3■■□□□ 1
PDLIM2-207ENST00000409417 DPCR1Q3MIW9 517 aa21.3■■□□□ 1
PDLIM2-207ENST00000409417 CYP26C1Q6V0L0 522 aa21.3■■□□□ 1
PDLIM2-207ENST00000409417 CCDC149Q6ZUS6 474 aa21.3■■□□□ 1
PDLIM2-207ENST00000409417 FRMD5Q7Z6J6 570 aa21.3■■□□□ 1
PDLIM2-207ENST00000409417 GPR149Q86SP6 731 aa21.3■■□□□ 1
PDLIM2-207ENST00000409417 OR10T2Q8NGX3 314 aa21.3■■□□□ 1
PDLIM2-207ENST00000409417 TMEM8AQ9HCN3 771 aa21.3■■□□□ 1
PDLIM2-207ENST00000409417 AFF4Q9UHB7 1163 aaKnown RBP21.3■■□□□ 1
PDLIM2-207ENST00000409417 CCDC195A0A1B0GUA6 201 aa21.29■■□□□ 1
PDLIM2-207ENST00000409417 GABRDO14764 452 aa21.29■■□□□ 1
PDLIM2-207ENST00000409417 C8AP07357 584 aa21.29■■□□□ 1
PDLIM2-207ENST00000409417 HNRNPA1P09651 372 aaKnown RBP eCLIP21.29■■□□□ 1
PDLIM2-207ENST00000409417 LHX1P48742 406 aa21.29■■□□□ 1
PDLIM2-207ENST00000409417 CBX2Q14781 532 aaPredicted RBP21.29■■□□□ 1
PDLIM2-207ENST00000409417 SGSM1Q2NKQ1 1148 aa21.29■■□□□ 1
PDLIM2-207ENST00000409417 ZNF699Q32M78 642 aa21.29■■□□□ 1
PDLIM2-207ENST00000409417 ATAT1Q5SQI0 421 aa21.29■■□□□ 1
PDLIM2-207ENST00000409417 CCDC183Q5T5S1 534 aa21.29■■□□□ 1
PDLIM2-207ENST00000409417 KRT39Q6A163 491 aa21.29■■□□□ 1
PDLIM2-207ENST00000409417 TCEAL8Q8IYN2 117 aa21.29■■□□□ 1
PDLIM2-207ENST00000409417 ADGRF2Q8IZF7 708 aa21.29■■□□□ 1
PDLIM2-207ENST00000409417 SLC7A14Q8TBB6 771 aa21.29■■□□□ 1
PDLIM2-207ENST00000409417 TAF4BQ92750 862 aa21.29■■□□□ 1
PDLIM2-207ENST00000409417 RIPOR3Q96MK2 946 aa21.29■■□□□ 1
PDLIM2-207ENST00000409417 NECTIN4Q96NY8 510 aa21.29■■□□□ 1
PDLIM2-207ENST00000409417 MMS19Q96T76 1030 aa21.29■■□□□ 1
PDLIM2-207ENST00000409417 CUL9Q8IWT3 2517 aa21.28■■□□□ 1
PDLIM2-207ENST00000409417 FGFR1OPO95684 399 aaKnown RBP21.28■■□□□ 1
PDLIM2-207ENST00000409417 GNA14O95837 355 aa21.28■■□□□ 1
PDLIM2-207ENST00000409417 FAM163BP0C2L3 166 aa21.28■■□□□ 1
PDLIM2-207ENST00000409417 OR4Q2P0C623 313 aa21.28■■□□□ 1
PDLIM2-207ENST00000409417 HOXA9P31269 272 aa21.28■■□□□ 1
PDLIM2-207ENST00000409417 ELF1P32519 619 aa21.28■■□□□ 1
PDLIM2-207ENST00000409417 MTHFRP42898 656 aa21.28■■□□□ 1
PDLIM2-207ENST00000409417 TNNC1P63316 161 aa21.28■■□□□ 1
PDLIM2-207ENST00000409417 ADCY1Q08828 1119 aa21.28■■□□□ 1
PDLIM2-207ENST00000409417 RNF19BQ6ZMZ0 732 aa21.28■■□□□ 1
PDLIM2-207ENST00000409417 TAS1R2Q8TE23 839 aa21.28■■□□□ 1
PDLIM2-207ENST00000409417 ADAMTS19Q8TE59 1207 aa21.28■■□□□ 1
PDLIM2-207ENST00000409417 ZNF707Q96C28 371 aaPredicted RBP21.28■■□□□ 1
PDLIM2-207ENST00000409417 MED15Q96RN5 788 aa21.28■■□□□ 1
PDLIM2-207ENST00000409417 SRRTQ9BXP5 876 aaKnown RBP21.28■■□□□ 1
PDLIM2-207ENST00000409417 PRKD2Q9BZL6 878 aa21.28■■□□□ 1
PDLIM2-207ENST00000409417 ZCWPW1Q9H0M4 648 aa21.28■■□□□ 1
PDLIM2-207ENST00000409417 DACH1Q9UI36 760 aa21.28■■□□□ 1
PDLIM2-207ENST00000409417 PRRG1O14668 218 aa21.27■■□□□ 1
PDLIM2-207ENST00000409417 TACC1O75410 805 aa21.27■■□□□ 1
PDLIM2-207ENST00000409417 ASS1P00966 412 aaKnown RBP21.27■■□□□ 1
PDLIM2-207ENST00000409417 HLA-DRAP01903 254 aa21.27■■□□□ 1
PDLIM2-207ENST00000409417 WEE2P0C1S8 567 aa21.27■■□□□ 1
PDLIM2-207ENST00000409417 ERCC5P28715 1186 aaPredicted RBP21.27■■□□□ 1
PDLIM2-207ENST00000409417 PIK3CAP42336 1068 aa21.27■■□□□ 1
PDLIM2-207ENST00000409417 MYL7Q01449 175 aa21.27■■□□□ 1
PDLIM2-207ENST00000409417 CCDC40Q4G0X9 1142 aa21.27■■□□□ 1
PDLIM2-207ENST00000409417 DCAF17Q5H9S7 520 aaPredicted RBP21.27■■□□□ 1
PDLIM2-207ENST00000409417 ZNF667Q5HYK9 610 aa21.27■■□□□ 1
PDLIM2-207ENST00000409417 CT47A1Q5JQC4 288 aaPredicted RBP21.27■■□□□ 1
PDLIM2-207ENST00000409417 PPM1LQ5SGD2 360 aa21.27■■□□□ 1
PDLIM2-207ENST00000409417 TCERG1LQ5VWI1 586 aa21.27■■□□□ 1
PDLIM2-207ENST00000409417 KBTBD7Q8WVZ9 684 aa21.27■■□□□ 1
PDLIM2-207ENST00000409417 SLC35C1Q96A29 364 aa21.27■■□□□ 1
PDLIM2-207ENST00000409417 TMEM209Q96SK2 561 aa21.27■■□□□ 1
PDLIM2-207ENST00000409417 ACBD6Q9BR61 282 aa21.27■■□□□ 1
PDLIM2-207ENST00000409417 MMRN2Q9H8L6 949 aa21.27■■□□□ 1
PDLIM2-207ENST00000409417 DDX43Q9NXZ2 648 aaKnown RBP21.27■■□□□ 1
PDLIM2-207ENST00000409417 NXF1Q9UBU9 619 aaKnown RBP21.27■■□□□ 1
PDLIM2-207ENST00000409417 PRKAG3Q9UGI9 489 aa21.27■■□□□ 1
PDLIM2-207ENST00000409417 CDH22Q9UJ99 828 aa21.27■■□□□ 1
PDLIM2-207ENST00000409417 MTCL1Q9Y4B5 1905 aaKnown RBP21.27■■□□□ 1
PDLIM2-207ENST00000409417 SEC24AO95486 1093 aa21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 WARSP23381 471 aaKnown RBP21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 PCSK1P29120 753 aa21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 MXI1P50539 228 aa21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 TSPY1Q01534 308 aa21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 SMARCB1Q12824 385 aa21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 FEZF2Q8TBJ5 459 aa21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 SMG7Q92540 1137 aaKnown RBP21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 IMPG2Q9BZV3 1241 aa21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 CYP4F11Q9HBI6 524 aa21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 BDP1A6H8Y1 2624 aa21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 TSC2P49815 1807 aa21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 POU2F2P09086 479 aa21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 P4HA1P13674 534 aa21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 MARSP56192 900 aaKnown RBP21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 LRRTM3Q86VH5 581 aa21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 OSTM1Q86WC4 334 aa21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 ADHFE1Q8IWW8 467 aa21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 DCP1BQ8IZD4 617 aaKnown RBP21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 FBXL13Q8NEE6 735 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms