RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 KRTAP3-1Q9BYR8 98 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 TRIM54Q9BYV2 358 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 LRRC27Q9C0I9 530 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 ZNF768Q9H5H4 540 aaKnown RBP6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 GPR35Q9HC97 309 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 KLHL11Q9NVR0 708 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 STK32BQ9NY57 414 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 TRPM5Q9NZQ8 1165 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 HSFX1Q9UBD0 423 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 PHTF1Q9UMS5 762 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 CORO2BQ9UQ03 480 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 PLEKHH2Q8IVE3 1493 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 ARHGEF5Q12774 1597 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 DNMT1P26358 1616 aaKnown RBP6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 CROCC2H7BZ55 1655 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 AHRRA9YTQ3 701 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 M0QYG6 137 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 MUSKO15146 869 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 DNAJB5O75953 348 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 SCAF4O95104 1147 aaKnown RBP6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 TSPOAP1O95153 1857 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 UNC5CO95185 931 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 KIF20AO95235 890 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 EN2P19622 333 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 RHBDL3P58872 404 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 FAM189BP81408 668 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 FMO1Q01740 532 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 ARHGAP5Q13017 1502 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 CDSNQ15517 529 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 CNGA2Q16280 664 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 SAMD9LQ8IVG5 1584 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 KRT78Q8N1N4 520 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 TTC9BQ8N6N2 239 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 CPT1CQ8TCG5 803 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 NUP133Q8WUM0 1156 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 MAML1Q92585 1016 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 EXTL1Q92935 676 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 SCAMP4Q969E2 229 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 SLC39A13Q96H72 371 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 TINAGL1Q9GZM7 467 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 NUP62CLQ9H1M0 184 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 KIAA1586Q9HCI6 787 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 CFDP1Q9UEE9 299 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 SRRDQ9UH36 339 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 OGDHLQ9ULD0 1010 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 MED16Q9Y2X0 877 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 CHST2Q9Y4C5 530 aa6.12□□□□□ -1.43
HMGB3P19-201ENST00000403971 ARID1BQ8NFD5 2236 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 PPRC1Q5VV67 1664 aaKnown RBP6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 ADGBQ8N7X0 1667 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 CAMSAP2Q08AD1 1489 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 NEO1Q92859 1461 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 CD109Q6YHK3 1445 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 KIAA1107Q9UPP5 1409 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 BTN3A1O00481 513 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 KPNA5O15131 536 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 PEX14O75381 377 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 RPS6KA4O75676 772 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 ABHD16AO95870 558 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 ANXA1P04083 346 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 GNAI2P04899 355 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 FGFR4P22455 802 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 HSD11B2P80365 405 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 TOB2Q14106 344 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 HABP2Q14520 560 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 LONRF1Q17RB8 773 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 C3orf38Q5JPI3 329 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 SPDYAQ5MJ70 313 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 ERICH6BQ5W0A0 696 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 GDF7Q7Z4P5 450 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 SESTD1Q86VW0 696 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 IL17DQ8TAD2 202 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 KBTBD7Q8WVZ9 684 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 LRIG1Q96JA1 1093 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 PCGF6Q9BYE7 350 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 SMURF2Q9HAU4 748 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 ZNF287Q9HBT7 754 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 SACM1LQ9NTJ5 587 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 CNOT11Q9UKZ1 510 aaKnown RBP6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 ATP11BQ9Y2G3 1177 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 SNX13Q9Y5W8 968 aa6.11□□□□□ -1.43
HMGB3P19-201ENST00000403971 ABCC1P33527 1531 aa6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 FANCAO15360 1455 aa6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 A0A1B0GTW7 788 aa6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 RHPN2P1A8MT19 583 aa6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 TMEM233B4DJY2 109 aa6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 F8W8V4 182 aa6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 VPS4BO75351 444 aa6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 ELANEP08246 267 aa6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 MAGEA10P43363 369 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 PRIM2P49643 509 aa6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 OCA2Q04671 838 aa6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 CTBP1Q13363 440 aa6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 USP39Q53GS9 565 aaKnown RBP6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 RABL3Q5HYI8 236 aa6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 TMPRSS6Q8IU80 811 aa6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 CFAP52Q8N1V2 620 aa6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 FAM46DQ8NEK8 389 aa6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 OR6B3Q8NGW1 331 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms