RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 ZBP1Q9H171 429 aa35.59■■■■□ 3.29
CSNK1E-204ENST00000403904 CISHQ9NSE2 258 aa35.59■■■■□ 3.29
CSNK1E-204ENST00000403904 GLUD2P49448 558 aa35.59■■■■□ 3.29
CSNK1E-204ENST00000403904 ERVFC1P60507 584 aa35.59■■■■□ 3.29
CSNK1E-204ENST00000403904 PRSS55Q6UWB4 352 aaPredicted RBP35.59■■■■□ 3.29
CSNK1E-204ENST00000403904 OR6B3Q8NGW1 331 aa35.59■■■■□ 3.29
CSNK1E-204ENST00000403904 GDPD5Q8WTR4 605 aa35.59■■■■□ 3.29
CSNK1E-204ENST00000403904 AUTS2Q8WXX7 1259 aa35.59■■■■□ 3.29
CSNK1E-204ENST00000403904 MRFAP1L1Q96HT8 127 aa35.59■■■■□ 3.29
CSNK1E-204ENST00000403904 NAA15Q9BXJ9 866 aaKnown RBP35.59■■■■□ 3.29
CSNK1E-204ENST00000403904 NLRC4Q9NPP4 1024 aa35.59■■■■□ 3.29
CSNK1E-204ENST00000403904 RFXAPO00287 272 aa35.58■■■■□ 3.29
CSNK1E-204ENST00000403904 HCRTO43612 131 aa35.58■■■■□ 3.29
CSNK1E-204ENST00000403904 ADCY5O95622 1261 aa35.58■■■■□ 3.29
CSNK1E-204ENST00000403904 WARSP23381 471 aaKnown RBP35.58■■■■□ 3.29
CSNK1E-204ENST00000403904 DSG1Q02413 1049 aa35.58■■■■□ 3.29
CSNK1E-204ENST00000403904 RAPGEF1Q13905 1077 aa35.58■■■■□ 3.29
CSNK1E-204ENST00000403904 KIAA0319Q5VV43 1072 aa35.58■■■■□ 3.29
CSNK1E-204ENST00000403904 ENOSF1Q7L5Y1 443 aa35.58■■■■□ 3.29
CSNK1E-204ENST00000403904 TMC7Q7Z402 723 aa35.58■■■■□ 3.29
CSNK1E-204ENST00000403904 LRCH3Q96II8 777 aa35.58■■■■□ 3.29
CSNK1E-204ENST00000403904 FAM81BQ96LP2 452 aa35.58■■■■□ 3.29
CSNK1E-204ENST00000403904 SNX25Q9H3E2 840 aa35.58■■■■□ 3.29
CSNK1E-204ENST00000403904 GABRDO14764 452 aa35.57■■■■□ 3.28
CSNK1E-204ENST00000403904 OAZ2O95190 189 aa35.57■■■■□ 3.28
CSNK1E-204ENST00000403904 URODP06132 367 aa35.57■■■■□ 3.28
CSNK1E-204ENST00000403904 LMO2P25791 158 aa35.57■■■■□ 3.28
CSNK1E-204ENST00000403904 GNL1P36915 607 aaPredicted RBP35.57■■■■□ 3.28
CSNK1E-204ENST00000403904 CAMK1Q14012 370 aa35.57■■■■□ 3.28
CSNK1E-204ENST00000403904 MRPL58Q14197 206 aaKnown RBP35.57■■■■□ 3.28
CSNK1E-204ENST00000403904 SPECC1LQ69YQ0 1117 aa35.57■■■■□ 3.28
CSNK1E-204ENST00000403904 LNX1Q8TBB1 728 aaPredicted RBP35.57■■■■□ 3.28
CSNK1E-204ENST00000403904 TCF25Q9BQ70 676 aa35.57■■■■□ 3.28
CSNK1E-204ENST00000403904 TLR9Q9NR96 1032 aa35.57■■■■□ 3.28
CSNK1E-204ENST00000403904 DDX43Q9NXZ2 648 aaKnown RBP35.57■■■■□ 3.28
CSNK1E-204ENST00000403904 NME7Q9Y5B8 376 aa35.57■■■■□ 3.28
CSNK1E-204ENST00000403904 SZT2Q5T011 3432 aa35.57■■■■□ 3.28
CSNK1E-204ENST00000403904 FAM163BP0C2L3 166 aa35.56■■■■□ 3.28
CSNK1E-204ENST00000403904 CTSAP10619 480 aa35.56■■■■□ 3.28
CSNK1E-204ENST00000403904 RFX1P22670 979 aa35.56■■■■□ 3.28
CSNK1E-204ENST00000403904 LHX1P48742 406 aa35.56■■■■□ 3.28
CSNK1E-204ENST00000403904 MRE11P49959 708 aa35.56■■■■□ 3.28
CSNK1E-204ENST00000403904 UBR7Q8N806 425 aa35.56■■■■□ 3.28
CSNK1E-204ENST00000403904 RTP3Q9BQQ7 232 aa35.56■■■■□ 3.28
CSNK1E-204ENST00000403904 HMGXB4Q9UGU5 601 aa35.56■■■■□ 3.28
CSNK1E-204ENST00000403904 FBXL5Q9UKA1 691 aa35.56■■■■□ 3.28
CSNK1E-204ENST00000403904 ITIH6Q6UXX5 1313 aa35.56■■■■□ 3.28
CSNK1E-204ENST00000403904 PDGFRBP09619 1106 aa35.55■■■■□ 3.28
CSNK1E-204ENST00000403904 ACO1P21399 889 aaKnown RBP35.55■■■■□ 3.28
CSNK1E-204ENST00000403904 INCA1Q0VD86 236 aa35.55■■■■□ 3.28
CSNK1E-204ENST00000403904 ANKS3Q6ZW76 656 aa35.55■■■■□ 3.28
CSNK1E-204ENST00000403904 PIK3R5Q8WYR1 880 aa35.55■■■■□ 3.28
CSNK1E-204ENST00000403904 TTYH1Q9H313 450 aaPredicted RBP35.55■■■■□ 3.28
CSNK1E-204ENST00000403904 ENTPD7Q9NQZ7 604 aa35.55■■■■□ 3.28
CSNK1E-204ENST00000403904 MRPL17Q9NRX2 175 aaKnown RBP35.55■■■■□ 3.28
CSNK1E-204ENST00000403904 BARX2Q9UMQ3 279 aaPredicted RBP35.55■■■■□ 3.28
CSNK1E-204ENST00000403904 STXBP5LQ9Y2K9 1186 aa35.55■■■■□ 3.28
CSNK1E-204ENST00000403904 CA8P35219 290 aa35.55■■■■□ 3.28
CSNK1E-204ENST00000403904 NDST1P52848 882 aa35.55■■■■□ 3.28
CSNK1E-204ENST00000403904 SPATA18Q8TC71 538 aa35.55■■■■□ 3.28
CSNK1E-204ENST00000403904 CEP72Q9P209 647 aa35.55■■■■□ 3.28
CSNK1E-204ENST00000403904 PCDHB4Q9Y5E5 795 aa35.55■■■■□ 3.28
CSNK1E-204ENST00000403904 COL4A4P53420 1690 aaPredicted RBP35.54■■■■□ 3.28
CSNK1E-204ENST00000403904 A8MXQ7 604 aa35.54■■■■□ 3.28
CSNK1E-204ENST00000403904 CILPO75339 1184 aa35.54■■■■□ 3.28
CSNK1E-204ENST00000403904 ACAT1P24752 427 aaKnown RBP35.54■■■■□ 3.28
CSNK1E-204ENST00000403904 YWHAEP62258 255 aaKnown RBP35.54■■■■□ 3.28
CSNK1E-204ENST00000403904 ORC1Q13415 861 aa35.54■■■■□ 3.28
CSNK1E-204ENST00000403904 DRAP1Q14919 205 aaPredicted RBP35.54■■■■□ 3.28
CSNK1E-204ENST00000403904 PTPN14Q15678 1187 aa35.54■■■■□ 3.28
CSNK1E-204ENST00000403904 PSMD5Q16401 504 aa35.54■■■■□ 3.28
CSNK1E-204ENST00000403904 CTXN3Q4LDR2 81 aa35.54■■■■□ 3.28
CSNK1E-204ENST00000403904 ZNF394Q53GI3 561 aa35.54■■■■□ 3.28
CSNK1E-204ENST00000403904 CACNA2D4Q7Z3S7 1137 aa35.54■■■■□ 3.28
CSNK1E-204ENST00000403904 THEM5Q8N1Q8 247 aa35.54■■■■□ 3.28
CSNK1E-204ENST00000403904 JAKMIP2Q96AA8 810 aa35.54■■■■□ 3.28
CSNK1E-204ENST00000403904 NUP58Q9BVL2 599 aa35.54■■■■□ 3.28
CSNK1E-204ENST00000403904 STK33Q9BYT3 514 aa35.54■■■■□ 3.28
CSNK1E-204ENST00000403904 TTYH3Q9C0H2 523 aa35.54■■■■□ 3.28
CSNK1E-204ENST00000403904 PCDHGC5Q9Y5F6 944 aa35.54■■■■□ 3.28
CSNK1E-204ENST00000403904 CXCL14O95715 111 aa35.53■■■■□ 3.28
CSNK1E-204ENST00000403904 IRS1P35568 1242 aa35.53■■■■□ 3.28
CSNK1E-204ENST00000403904 PLPP4Q5VZY2 271 aa35.53■■■■□ 3.28
CSNK1E-204ENST00000403904 ZNF280DQ6N043 979 aa35.53■■■■□ 3.28
CSNK1E-204ENST00000403904 TMEM270Q6UE05 265 aa35.53■■■■□ 3.28
CSNK1E-204ENST00000403904 TMC6Q7Z403 805 aa35.53■■■■□ 3.28
CSNK1E-204ENST00000403904 MICAL1Q8TDZ2 1067 aa35.53■■■■□ 3.28
CSNK1E-204ENST00000403904 WHAMMQ8TF30 809 aa35.53■■■■□ 3.28
CSNK1E-204ENST00000403904 TWNKQ96RR1 684 aa35.53■■■■□ 3.28
CSNK1E-204ENST00000403904 GPR88Q9GZN0 384 aa35.53■■■■□ 3.28
CSNK1E-204ENST00000403904 MYO7AQ13402 2215 aa35.52■■■■□ 3.28
CSNK1E-204ENST00000403904 TMEM265A0A087WTH1 108 aa35.52■■■■□ 3.28
CSNK1E-204ENST00000403904 H7C4K7 107 aa35.52■■■■□ 3.28
CSNK1E-204ENST00000403904 PNMA6AP0CW24 399 aaPredicted RBP35.52■■■■□ 3.28
CSNK1E-204ENST00000403904 RPL17P18621 184 aaKnown RBP35.52■■■■□ 3.28
CSNK1E-204ENST00000403904 FIGNQ5HY92 759 aa35.52■■■■□ 3.28
CSNK1E-204ENST00000403904 RSPO2Q6UXX9 243 aaPredicted RBP35.52■■■■□ 3.28
CSNK1E-204ENST00000403904 TTC39CQ8N584 583 aa35.52■■■■□ 3.28
CSNK1E-204ENST00000403904 OR10T2Q8NGX3 314 aa35.52■■■■□ 3.28
CSNK1E-204ENST00000403904 CPLX3Q8WVH0 158 aa35.52■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 570.9 ms