RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TSC2P49815 1807 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 KIAA1549LQ6ZVL6 1849 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ASXL3Q9C0F0 2248 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ZNF638Q14966 1978 aaKnown RBP12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 PTPRDP23468 1912 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 PHLPP2Q6ZVD8 1323 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ACACAQ13085 2346 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 CCDC163A0A0D9SF12 145 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 SRRM3A6NNA2 597 aaPredicted RBP12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 CCDC192P0DO97 292 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 MCF2P10911 925 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 HARSP12081 509 aaKnown RBP12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 GABRR2P28476 465 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 NOVA1P51513 510 aaKnown RBP12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 PEX3P56589 373 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 FOXC1Q12948 553 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 GPR17Q13304 367 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ZBTB6Q15916 424 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 C1orf228Q6PIY5 440 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 TMEM150AQ86TG1 271 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 C4orf32Q8N8J7 132 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 NSUN7Q8NE18 718 aaKnown RBP12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 APPL2Q8NEU8 664 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 BPIFB1Q8TDL5 484 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 PSMG2Q969U7 264 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 IFT74Q96LB3 600 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ATXN3LQ9H3M9 355 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 TMEM134Q9H6X4 195 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 VPS45Q9NRW7 570 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 GKN1Q9NS71 199 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 OBP2AQ9NY56 170 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 PCDHGA5Q9Y5G8 931 aa12.98□□□□□ -0.33
SPTLC1P3-201ENST00000403408 OBSL1O75147 1896 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 LNP1A1A4G5 178 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 CCDC169A6NNP5 214 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 CDX4O14627 284 aaPredicted RBP12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 HIP1RO75146 1068 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 RNF40O75150 1001 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 REC8O95072 547 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 CXCL8P10145 99 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ARSAP15289 507 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ATF6P18850 670 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 WEE1P30291 646 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 LRPAP1P30533 357 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 EPHB3P54753 998 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 YWHAHQ04917 246 aaPredicted RBP12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ZNF252P-AS1Q0IIN9 211 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ZNF174Q15697 407 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ME3Q16798 604 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ITPRIPL2Q3MIP1 535 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 MPZL3Q6UWV2 235 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 KCNK18Q7Z418 384 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 OR10T2Q8NGX3 314 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 KIFAP3Q92845 792 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 EDEM2Q9BV94 578 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 RUSC1Q9BVN2 902 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 MRPL4Q9BYD3 311 aaKnown RBP12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 INVSQ9Y283 1065 aa12.97□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ASH1LQ9NR48 2969 aaKnown RBP12.96□□□□□ -0.33
SPTLC1P3-201ENST00000403408 BCLAF3A2AJT9 711 aaKnown RBP12.96□□□□□ -0.33
SPTLC1P3-201ENST00000403408 SFI1A8K8P3 1242 aa12.96□□□□□ -0.33
SPTLC1P3-201ENST00000403408 PATE3B3GLJ2 98 aa12.96□□□□□ -0.33
SPTLC1P3-201ENST00000403408 E9PMD0 336 aa12.96□□□□□ -0.33
SPTLC1P3-201ENST00000403408 TRDMT1O14717 391 aaKnown RBP12.96□□□□□ -0.33
SPTLC1P3-201ENST00000403408 AKAP3O75969 853 aa12.96□□□□□ -0.33
SPTLC1P3-201ENST00000403408 NBR1Q14596 966 aa12.96□□□□□ -0.33
SPTLC1P3-201ENST00000403408 SH3PXD2AQ5TCZ1 1133 aa12.96□□□□□ -0.33
SPTLC1P3-201ENST00000403408 FAM200AQ8TCP9 573 aa12.96□□□□□ -0.33
SPTLC1P3-201ENST00000403408 SCNM1Q9BWG6 230 aa12.96□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ADAM33Q9BZ11 813 aa12.96□□□□□ -0.33
SPTLC1P3-201ENST00000403408 EBF3Q9H4W6 596 aa12.96□□□□□ -0.33
SPTLC1P3-201ENST00000403408 TASP1Q9H6P5 420 aa12.96□□□□□ -0.33
SPTLC1P3-201ENST00000403408 KIAA1024Q9UPX6 916 aa12.96□□□□□ -0.33
SPTLC1P3-201ENST00000403408 KALRNO60229 2985 aa12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 TTC26A0AVF1 554 aa12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 DPYSL4O14531 572 aa12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 SLC16A4O15374 487 aa12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 OR52Z1P0C646 297 aa12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 MARCKSP29966 332 aaPredicted RBP12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 TNFSF9P41273 254 aa12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 MCM2P49736 904 aa12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 GALK1P51570 392 aa12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 GUCY1B3Q02153 619 aa12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 CREB5Q02930 508 aa12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 RING1Q06587 406 aa12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 RUNX3Q13761 415 aa12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 ACAP1Q15027 740 aa12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 LRRTM3Q86VH5 581 aa12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 STKLD1Q8NE28 680 aa12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 USP13Q92995 863 aaPredicted RBP12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 DDX19AQ9NUU7 478 aaKnown RBP12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 SLC8A2Q9UPR5 921 aa12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 MYO18AQ92614 2054 aaKnown RBP12.95□□□□□ -0.34
SPTLC1P3-201ENST00000403408 MYH11P35749 1972 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 OR6C75A6NL08 312 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 PP2D1A8MPX8 630 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 TAF4O00268 1085 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 FAM189A1O60320 539 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 CAVIN2O95810 425 aa12.94□□□□□ -0.34
SPTLC1P3-201ENST00000403408 BCKDHBP21953 392 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms