RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 RNF19BQ6ZMZ0 732 aa20.64■□□□□ 0.89
RTN4-207ENST00000402434 FAM186BQ8IYM0 893 aa20.64■□□□□ 0.89
RTN4-207ENST00000402434 THEM5Q8N1Q8 247 aa20.64■□□□□ 0.89
RTN4-207ENST00000402434 PDCL2Q8N4E4 241 aa20.64■□□□□ 0.89
RTN4-207ENST00000402434 TOP6BLQ8N6T0 577 aa20.64■□□□□ 0.89
RTN4-207ENST00000402434 OR10T2Q8NGX3 314 aa20.64■□□□□ 0.89
RTN4-207ENST00000402434 SPATA18Q8TC71 538 aa20.64■□□□□ 0.89
RTN4-207ENST00000402434 WDR6Q9NNW5 1121 aaKnown RBP20.64■□□□□ 0.89
RTN4-207ENST00000402434 L1RE1Q9UN81 338 aa20.64■□□□□ 0.89
RTN4-207ENST00000402434 BIN1O00499 593 aa20.63■□□□□ 0.89
RTN4-207ENST00000402434 CETN3O15182 167 aa20.63■□□□□ 0.89
RTN4-207ENST00000402434 VNN2O95498 520 aa20.63■□□□□ 0.89
RTN4-207ENST00000402434 STAU1O95793 577 aaKnown RBP20.63■□□□□ 0.89
RTN4-207ENST00000402434 OR4Q2P0C623 313 aa20.63■□□□□ 0.89
RTN4-207ENST00000402434 ELF1P32519 619 aa20.63■□□□□ 0.89
RTN4-207ENST00000402434 ADCY1Q08828 1119 aa20.63■□□□□ 0.89
RTN4-207ENST00000402434 SOWAHAQ2M3V2 549 aa20.63■□□□□ 0.89
RTN4-207ENST00000402434 ZACNQ401N2 412 aa20.63■□□□□ 0.89
RTN4-207ENST00000402434 FOXR2Q6PJQ5 311 aa20.63■□□□□ 0.89
RTN4-207ENST00000402434 EEF2KMTQ96G04 330 aa20.63■□□□□ 0.89
RTN4-207ENST00000402434 RPGRIP1Q96KN7 1286 aa20.63■□□□□ 0.89
RTN4-207ENST00000402434 TSG101Q99816 390 aa20.63■□□□□ 0.89
RTN4-207ENST00000402434 XYLT2Q9H1B5 865 aa20.63■□□□□ 0.89
RTN4-207ENST00000402434 CLSTN2Q9H4D0 955 aa20.63■□□□□ 0.89
RTN4-207ENST00000402434 USTQ9Y2C2 406 aa20.63■□□□□ 0.89
RTN4-207ENST00000402434 GABRDO14764 452 aa20.62■□□□□ 0.89
RTN4-207ENST00000402434 ATICP31939 592 aa20.62■□□□□ 0.89
RTN4-207ENST00000402434 SSTR3P32745 418 aaPredicted RBP20.62■□□□□ 0.89
RTN4-207ENST00000402434 MYL6P60660 151 aa20.62■□□□□ 0.89
RTN4-207ENST00000402434 TRPC3Q13507 836 aa20.62■□□□□ 0.89
RTN4-207ENST00000402434 SV2AQ7L0J3 742 aa20.62■□□□□ 0.89
RTN4-207ENST00000402434 TMEM209Q96SK2 561 aa20.62■□□□□ 0.89
RTN4-207ENST00000402434 ZCWPW1Q9H0M4 648 aa20.62■□□□□ 0.89
RTN4-207ENST00000402434 VRTNQ9H8Y1 702 aa20.62■□□□□ 0.89
RTN4-207ENST00000402434 PIDD1Q9HB75 910 aa20.62■□□□□ 0.89
RTN4-207ENST00000402434 CYP4F11Q9HBI6 524 aa20.62■□□□□ 0.89
RTN4-207ENST00000402434 DOCK6Q96HP0 2047 aa20.62■□□□□ 0.89
RTN4-207ENST00000402434 TRIM49BA6NDI0 452 aa20.62■□□□□ 0.89
RTN4-207ENST00000402434 PRRG1O14668 218 aa20.62■□□□□ 0.89
RTN4-207ENST00000402434 PHACTR2O75167 634 aa20.62■□□□□ 0.89
RTN4-207ENST00000402434 XYLBO75191 536 aa20.62■□□□□ 0.89
RTN4-207ENST00000402434 KRT13P13646 458 aa20.62■□□□□ 0.89
RTN4-207ENST00000402434 BIRC3Q13489 604 aa20.62■□□□□ 0.89
RTN4-207ENST00000402434 ACBD6Q9BR61 282 aa20.62■□□□□ 0.89
RTN4-207ENST00000402434 NR2E1Q9Y466 385 aa20.62■□□□□ 0.89
RTN4-207ENST00000402434 DENND4AQ7Z401 1863 aa20.61■□□□□ 0.89
RTN4-207ENST00000402434 CCL16O15467 120 aa20.61■□□□□ 0.89
RTN4-207ENST00000402434 VNN1O95497 513 aa20.61■□□□□ 0.89
RTN4-207ENST00000402434 FAM163BP0C2L3 166 aa20.61■□□□□ 0.89
RTN4-207ENST00000402434 LHX1P48742 406 aa20.61■□□□□ 0.89
RTN4-207ENST00000402434 SMARCB1Q12824 385 aa20.61■□□□□ 0.89
RTN4-207ENST00000402434 NCOA4Q13772 614 aa20.61■□□□□ 0.89
RTN4-207ENST00000402434 WDR72Q3MJ13 1102 aa20.61■□□□□ 0.89
RTN4-207ENST00000402434 TTI2Q6NXR4 508 aa20.61■□□□□ 0.89
RTN4-207ENST00000402434 LRRTM3Q86VH5 581 aa20.61■□□□□ 0.89
RTN4-207ENST00000402434 ADGRF2Q8IZF7 708 aa20.61■□□□□ 0.89
RTN4-207ENST00000402434 SYAP1Q96A49 352 aaPredicted RBP20.61■□□□□ 0.89
RTN4-207ENST00000402434 HSFX1Q9UBD0 423 aa20.61■□□□□ 0.89
RTN4-207ENST00000402434 INSL5Q9Y5Q6 135 aa20.61■□□□□ 0.89
RTN4-207ENST00000402434 MTMR11A4FU01 709 aa20.6■□□□□ 0.89
RTN4-207ENST00000402434 SLC16A3O15427 465 aaKnown RBP20.6■□□□□ 0.89
RTN4-207ENST00000402434 EPB41P11171 864 aaKnown RBP20.6■□□□□ 0.89
RTN4-207ENST00000402434 PPP3CAQ08209 521 aa20.6■□□□□ 0.89
RTN4-207ENST00000402434 KBTBD7Q8WVZ9 684 aa20.6■□□□□ 0.89
RTN4-207ENST00000402434 PGLYRP2Q96PD5 576 aa20.6■□□□□ 0.89
RTN4-207ENST00000402434 DUSP9Q99956 384 aaKnown RBP20.6■□□□□ 0.89
RTN4-207ENST00000402434 CRISPLD1Q9H336 500 aa20.6■□□□□ 0.89
RTN4-207ENST00000402434 DDX43Q9NXZ2 648 aaKnown RBP20.6■□□□□ 0.89
RTN4-207ENST00000402434 CLUHO75153 1309 aa20.6■□□□□ 0.89
RTN4-207ENST00000402434 GOLGA6L22H0YM25 854 aa20.59■□□□□ 0.89
RTN4-207ENST00000402434 TACC1O75410 805 aa20.59■□□□□ 0.89
RTN4-207ENST00000402434 TRIM49P0CI25 452 aa20.59■□□□□ 0.89
RTN4-207ENST00000402434 TRIM49CP0CI26 452 aa20.59■□□□□ 0.89
RTN4-207ENST00000402434 GTF2H1P32780 548 aa20.59■□□□□ 0.89
RTN4-207ENST00000402434 DUSP4Q13115 394 aa20.59■□□□□ 0.89
RTN4-207ENST00000402434 SGSM1Q2NKQ1 1148 aa20.59■□□□□ 0.89
RTN4-207ENST00000402434 SLC39A12Q504Y0 691 aa20.59■□□□□ 0.89
RTN4-207ENST00000402434 KLHL10Q6JEL2 608 aa20.59■□□□□ 0.89
RTN4-207ENST00000402434 GRASPQ7Z6J2 395 aaPredicted RBP20.59■□□□□ 0.89
RTN4-207ENST00000402434 OSTM1Q86WC4 334 aa20.59■□□□□ 0.89
RTN4-207ENST00000402434 ATAD1Q8NBU5 361 aa20.59■□□□□ 0.89
RTN4-207ENST00000402434 NELFBQ8WX92 580 aa20.59■□□□□ 0.89
RTN4-207ENST00000402434 BICDL2A1A5D9 508 aa20.58■□□□□ 0.89
RTN4-207ENST00000402434 C2CD4DB7Z1M9 353 aa20.58■□□□□ 0.89
RTN4-207ENST00000402434 LRG1P02750 347 aa20.58■□□□□ 0.89
RTN4-207ENST00000402434 GCLMP48507 274 aa20.58■□□□□ 0.89
RTN4-207ENST00000402434 MYL7Q01449 175 aa20.58■□□□□ 0.89
RTN4-207ENST00000402434 OTOP3Q7RTS5 596 aa20.58■□□□□ 0.89
RTN4-207ENST00000402434 RNF135Q8IUD6 432 aa20.58■□□□□ 0.89
RTN4-207ENST00000402434 DCP1BQ8IZD4 617 aaKnown RBP20.58■□□□□ 0.89
RTN4-207ENST00000402434 ZDHHC14Q8IZN3 488 aa20.58■□□□□ 0.89
RTN4-207ENST00000402434 C2orf15Q8WU43 125 aaKnown RBP20.58■□□□□ 0.89
RTN4-207ENST00000402434 TAF4BQ92750 862 aa20.58■□□□□ 0.89
RTN4-207ENST00000402434 KHSRPQ92945 711 aaKnown RBP eCLIP20.58■□□□□ 0.893e-8■■□□□ 11.5
RTN4-207ENST00000402434 CEP63Q96MT8 703 aa20.58■□□□□ 0.89
RTN4-207ENST00000402434 MMS19Q96T76 1030 aa20.58■□□□□ 0.89
RTN4-207ENST00000402434 PKMYT1Q99640 499 aa20.58■□□□□ 0.89
RTN4-207ENST00000402434 NUP62CLQ9H1M0 184 aa20.58■□□□□ 0.89
RTN4-207ENST00000402434 DNMT3BQ9UBC3 853 aaKnown RBP20.58■□□□□ 0.89
RTN4-207ENST00000402434 POLIQ9UNA4 740 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms