RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 KCTD6Q8NC69 237 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 SEPT1Q8WYJ6 367 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 DDX1Q92499 740 aaKnown RBP8.12□□□□□ -1.11
HDAC9-201ENST00000401921 SEC14L1Q92503 715 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 TLCD1Q96CP7 247 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 CFAP57Q96MR6 1250 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 FAM210AQ96ND0 272 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 SMC6Q96SB8 1091 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 NTPCRQ9BSD7 190 aaKnown RBP8.12□□□□□ -1.11
HDAC9-201ENST00000401921 ROPN1BQ9BZX4 212 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-201ENST00000401921 ROPN1Q9HAT0 212 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-201ENST00000401921 CISHQ9NSE2 258 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 NINJ2Q9NZG7 142 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 ARHGAP28Q9P2N2 729 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 ZNF214Q9UL59 606 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-201ENST00000401921 NAALADL1Q9UQQ1 740 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 FOCADQ5VW36 1801 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 ATP8B3O60423 1300 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 PTPRJQ12913 1337 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 MYPNQ86TC9 1320 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 GOLGA8RI6L899 631 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 DNM1LO00429 736 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 CDH16O75309 829 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 RGS20O76081 388 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 C4BPAP04003 597 aaKnown RBP8.12□□□□□ -1.11
HDAC9-201ENST00000401921 CALB1P05937 261 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 UNGP13051 313 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-201ENST00000401921 MMP13P45452 471 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 RAP1GAPP47736 663 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 CDH8P55286 799 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 NOMO3P69849 1222 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 IL9RQ01113 521 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 CAV1Q03135 178 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 ANKRD20A8PQ5CZ79 823 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 ZNF667Q5HYK9 610 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 TRPM8Q7Z2W7 1104 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 MTMR14Q8NCE2 650 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 OLIG1Q8TAK6 271 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 PYROXD1Q8WU10 500 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 CD101Q93033 1021 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 ZBTB10Q96DT7 871 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 MPHOSPH6Q99547 160 aaKnown RBP8.12□□□□□ -1.11
HDAC9-201ENST00000401921 CGRRF1Q99675 332 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 HERPUD2Q9BSE4 406 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 PORCNQ9H237 461 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 MCM8Q9UJA3 840 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 FSBPO95073 299 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 RPSAP08865 295 aaKnown RBP8.12□□□□□ -1.11
HDAC9-201ENST00000401921 KRT3P12035 628 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 ABCD1P33897 745 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 CCNHP51946 323 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-201ENST00000401921 SETDB1Q15047 1291 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 CNGA2Q16280 664 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 CCNG2Q16589 344 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 TAS1R3Q7RTX0 852 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 ZC3H18Q86VM9 953 aaKnown RBP8.12□□□□□ -1.11
HDAC9-201ENST00000401921 CTAGE3PQ8IX95 158 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 KIF2BQ8N4N8 673 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 HEXIM2Q96MH2 286 aaKnown RBP8.12□□□□□ -1.11
HDAC9-201ENST00000401921 SERPINB12Q96P63 405 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 KLF6Q99612 283 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-201ENST00000401921 FHDC1Q9C0D6 1143 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-201ENST00000401921 RPF1Q9H9Y2 349 aaKnown RBP8.12□□□□□ -1.11
HDAC9-201ENST00000401921 AVENQ9NQS1 362 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-201ENST00000401921 AKT3Q9Y243 479 aa8.12□□□□□ -1.11
HDAC9-201ENST00000401921 ZNF541Q9H0D2 1346 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 SPDYE16A6NNV3 312 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-201ENST00000401921 SPATA31C2B4DYI2 1134 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 H7C0C1 242 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 CST8O60676 142 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 GRAP2O75791 330 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 AP1G2O75843 785 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 MTA2O94776 668 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 MAP3K6O95382 1288 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 VNN1O95497 513 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 GH1P01241 217 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 TCF4P15884 667 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 ATP5OP48047 213 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 CENPCQ03188 943 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 CAPSQ13938 189 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 CATSPERGQ6ZRH7 1159 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 CENPUQ71F23 418 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 PARP9Q8IXQ6 854 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 RCOR2Q8IZ40 523 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 DDX27Q96GQ7 796 aaKnown RBP8.11□□□□□ -1.11
HDAC9-201ENST00000401921 FBXL18Q96ME1 805 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 SPATA33Q96N06 139 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 MTFR1LQ9H019 292 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 ALG13Q9NP73 1137 aaKnown RBP8.11□□□□□ -1.11
HDAC9-201ENST00000401921 USP15Q9Y4E8 981 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-201ENST00000401921 KAT6AQ92794 2004 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 PSTPIP1O43586 416 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 SKAP2O75563 359 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-201ENST00000401921 KCNA3P22001 575 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 UBA1P22314 1058 aaKnown RBP8.11□□□□□ -1.11
HDAC9-201ENST00000401921 RPS12P25398 132 aaKnown RBP8.11□□□□□ -1.11
HDAC9-201ENST00000401921 CLCN3P51790 818 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 KCTD2Q14681 263 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 SGSM1Q2NKQ1 1148 aa8.11□□□□□ -1.11
HDAC9-201ENST00000401921 ZC3H12AQ5D1E8 599 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms