RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 CYP26A1O43174 497 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 B4GALT4O60513 344 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 EN2P19622 333 aaPredicted RBP16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 MARCKSL1P49006 195 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 PLTPP55058 493 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 SNRNP35Q16560 246 aaKnown RBP16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ANKRD33Q7Z3H0 272 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 NECAB2Q7Z6G3 386 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 FAM126BQ8IXS8 530 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 PPM1KQ8N3J5 372 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 TMC2Q8TDI7 906 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 DNAJB3Q8WWF6 145 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 KCNN1Q92952 543 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CENPTQ96BT3 561 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 PGM2Q96G03 612 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 FAM49AQ9H0Q0 323 aaPredicted RBP16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 TRPV6Q9H1D0 765 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 EPB41L4BQ9H329 900 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 TMEM8AQ9HCN3 771 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 TBX20Q9UMR3 447 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 C5orf60A6NFR6 353 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CCDC169A6NNP5 214 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CD4P01730 458 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 VTNP04004 478 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 SCP2P22307 547 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 GTF2H1P32780 548 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 GPC3P51654 580 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 FMO1Q01740 532 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CDR2Q01850 454 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ENPEPQ07075 957 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CAPSQ13938 189 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 AADACL2Q6P093 401 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 C6orf89Q6UWU4 347 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 MMS22LQ6ZRQ5 1243 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 UBE2Q1Q7Z7E8 422 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 USP37Q86T82 979 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 SLC13A5Q86YT5 568 aaPredicted RBP16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 MAP4K3Q8IVH8 894 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ZSWIM2Q8NEG5 633 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ZNF564Q8TBZ8 553 aaPredicted RBP16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 RAPGEF5Q92565 580 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 TOX2Q96NM4 488 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 NUP85Q9BW27 656 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 KMT5AQ9NQR1 393 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 NOD1Q9Y239 953 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 PCDHA3Q9Y5H8 950 aa16.94■□□□□ 0.3
CHRFAM7A-203ENST00000401522 SPOPO43791 374 aa16.93■□□□□ 0.3
CHRFAM7A-203ENST00000401522 SRGAP2CP0DJJ0 459 aa16.93■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CYP11B1P15538 503 aa16.93■□□□□ 0.3
CHRFAM7A-203ENST00000401522 FNTAP49354 379 aa16.93■□□□□ 0.3
CHRFAM7A-203ENST00000401522 PDE6CP51160 858 aa16.93■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ATN1P54259 1190 aaPredicted RBP16.93■□□□□ 0.3
CHRFAM7A-203ENST00000401522 TFDP1Q14186 410 aa16.93■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CCDC137Q6PK04 289 aaKnown RBP16.93■□□□□ 0.3
CHRFAM7A-203ENST00000401522 RSPH3Q86UC2 560 aa16.93■□□□□ 0.3
CHRFAM7A-203ENST00000401522 SLC47A2Q86VL8 602 aa16.93■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CBWD2Q8IUF1 395 aa16.93■□□□□ 0.3
CHRFAM7A-203ENST00000401522 C12orf50Q8NA57 414 aaPredicted RBP16.93■□□□□ 0.3
CHRFAM7A-203ENST00000401522 TMEM161BQ8NDZ6 487 aa16.93■□□□□ 0.3
CHRFAM7A-203ENST00000401522 FBXO25Q8TCJ0 367 aa16.93■□□□□ 0.3
CHRFAM7A-203ENST00000401522 SEMA4DQ92854 862 aa16.93■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ZNF653Q96CK0 615 aa16.93■□□□□ 0.3
CHRFAM7A-203ENST00000401522 NT5C1BQ96P26 610 aa16.93■□□□□ 0.3
CHRFAM7A-203ENST00000401522 NFKBIZQ9BYH8 718 aa16.93■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ARHGAP28Q9P2N2 729 aa16.93■□□□□ 0.3
CHRFAM7A-203ENST00000401522 FAM170AA1A519 330 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 GOLGA8IPA6NC78 632 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 GOLGA8JA6NMD2 632 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 DCDC2CA8MYV0 355 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 H0YCG3 227 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 GPR32O75388 356 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 MMEP08473 750 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 PYGMP11217 842 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ADSSP30520 456 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 RPL21P46778 160 aaKnown RBP16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 NLRP11P59045 1033 aaKnown RBP16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 SLMAPQ14BN4 828 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CDCA2Q69YH5 1023 aaPredicted RBP16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 TTC27Q6P3X3 843 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ZNF410Q86VK4 478 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CNPY4Q8N129 248 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 RNF149Q8NC42 400 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 HELQQ8TDG4 1101 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 PARD3BQ8TEW8 1205 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 WNT8BQ93098 351 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 TMEM109Q9BVC6 243 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ADAMTS10Q9H324 1103 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 IFT122Q9HBG6 1241 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 LRRIQ4A6NIV6 560 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CAND2O75155 1236 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ABCD1P33897 745 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 COILP38432 576 aaPredicted RBP16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 RWDD2BP57060 319 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ADCY2Q08462 1091 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 KCTD19Q17RG1 926 aaPredicted RBP16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 RNF187Q5TA31 235 aaPredicted RBP16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 IFNLR1Q8IU57 520 aaPredicted RBP16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 SUGP1Q8IWZ8 645 aaKnown RBP16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 FBXL13Q8NEE6 735 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 DEPTORQ8TB45 409 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms