RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 SMAD1Q15797 465 aaKnown RBP11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 BBS9Q3SYG4 887 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 ZACNQ401N2 412 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 TAF1BQ53T94 588 aaPredicted RBP11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 PPP1R21Q6ZMI0 780 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 LONP2Q86WA8 852 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 ABRAQ8N0Z2 381 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 TMC2Q8TDI7 906 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 RPAP3Q9H6T3 665 aaPredicted RBP11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 RNF146Q9NTX7 359 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 NPM3O75607 178 aaKnown RBP11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 CYP1A1P04798 512 aaPredicted RBP11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 CD48P09326 243 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 NEFHP12036 1026 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 SLC1A1P43005 524 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 GCLCP48506 637 aaPredicted RBP11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 POLGP54098 1239 aaPredicted RBP11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 FSTL1Q12841 308 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 SPARCL1Q14515 664 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 PLEKHG4Q58EX7 1191 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 RPAINQ86UA6 219 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 MTDHQ86UE4 582 aaKnown RBP11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 MCF2L2Q86YR7 1114 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 RHPN2Q8IUC4 686 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 ZCCHC9Q8N567 271 aaKnown RBP11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 FEZF2Q8TBJ5 459 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 ZNF606Q8WXB4 792 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 FBXL18Q96ME1 805 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 CFAP57Q96MR6 1250 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 SLC17A7Q9P2U7 560 aa11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 TRPC5Q9UL62 973 aaPredicted RBP11.16□□□□□ -0.62
PPP4R1-203ENST00000400556 DNALI1O14645 258 aaPredicted RBP11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 RAD23BP54727 409 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 RIPK1Q13546 671 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 SEPT7Q16181 437 aaKnown RBP11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 MAPK6Q16659 721 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 OTOAQ7RTW8 1153 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 GBP7Q8N8V2 638 aaPredicted RBP11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 RFWD2Q8NHY2 731 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 ASAP3Q8TDY4 903 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 MAIP1Q8WWC4 291 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 SLITRK1Q96PX8 696 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 MSTO1Q9BUK6 570 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 TBC1D10AQ9BXI6 508 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 AVENQ9NQS1 362 aaPredicted RBP11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 METTL5Q9NRN9 209 aaKnown RBP11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 AGTPBP1Q9UPW5 1226 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 C4BPAP04003 597 aaKnown RBP11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 MAN1A1P33908 653 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 KRT76Q01546 638 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 TAF5Q15542 800 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 SPDYE2Q495Y8 402 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 RFWD3Q6PCD5 774 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 CRELD2Q6UXH1 353 aaPredicted RBP11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 EEPD1Q7L9B9 569 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 USP37Q86T82 979 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 FAM13CQ8NE31 585 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 ST6GALNAC4Q9H4F1 302 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 GINM1Q9NU53 330 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 LGALS13Q9UHV8 139 aa11.15□□□□□ -0.62
PPP4R1-203ENST00000400556 RGS20O76081 388 aa11.15□□□□□ -0.63
PPP4R1-203ENST00000400556 CCND1P24385 295 aa11.15□□□□□ -0.63
PPP4R1-203ENST00000400556 JAK3P52333 1124 aa11.15□□□□□ -0.63
PPP4R1-203ENST00000400556 FNBP1LQ5T0N5 605 aa11.15□□□□□ -0.63
PPP4R1-203ENST00000400556 CNKSR1Q969H4 720 aa11.15□□□□□ -0.63
PPP4R1-203ENST00000400556 SENP7Q9BQF6 1050 aa11.15□□□□□ -0.63
PPP4R1-203ENST00000400556 PLCD4Q9BRC7 762 aa11.15□□□□□ -0.63
PPP4R1-203ENST00000400556 SLC38A10Q9HBR0 1119 aa11.15□□□□□ -0.63
PPP4R1-203ENST00000400556 CYP26B1Q9NR63 512 aa11.15□□□□□ -0.63
PPP4R1-203ENST00000400556 EURLQ9NYK6 297 aa11.15□□□□□ -0.63
PPP4R1-203ENST00000400556 LTBP4Q8N2S1 1624 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 CFAP69A5D8W1 941 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 ITGBL1O95965 494 aaPredicted RBP11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 T-ENOLP0DO92 83 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 CD19P15391 556 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 CPA2P48052 419 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 GPX6P59796 221 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 MDH1BQ5I0G3 518 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 DNAJC24Q6P3W2 148 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 SPOCD1Q6ZMY3 1216 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 LRRC6Q86X45 466 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 KATNAL2Q8IYT4 538 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 PTPRN2Q92932 1015 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 ZBTB10Q96DT7 871 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 NUDCD1Q96RS6 583 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 MTMR12Q9C0I1 747 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 FBXO6Q9NRD1 293 aaPredicted RBP11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 NXF1Q9UBU9 619 aaKnown RBP11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 THSD7AQ9UPZ6 1657 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 K7ERI5 159 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 WNT10BO00744 389 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 MAPK13O15264 365 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 LYPLA2O95372 231 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 ABL2P42684 1182 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 ACTR2P61160 394 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 CAV1Q03135 178 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 NCOA4Q13772 614 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 PRKG1Q13976 671 aa11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 SNRNP48Q6IEG0 339 aaKnown RBP11.14□□□□□ -0.63
PPP4R1-203ENST00000400556 CCDC33Q8N5R6 958 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms