RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 GBF1Q92538 1859 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 CASTOR2A6NHX0 329 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 TRAPPC3O43617 180 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 HUS1O60921 280 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 OAZ2O95190 189 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 KIF4AO95239 1232 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 FGFR3P22607 806 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 CDH5P33151 784 aaPredicted RBP7.31□□□□□ -1.24
USP16-203ENST00000399975 GATMP50440 423 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 BCAR1P56945 870 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 CDR2Q01850 454 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 GOLGA8FQ08AF8 430 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 GOLGA8DPQ0D2H9 430 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 ARHGAP44Q17R89 818 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 TIGD5Q53EQ6 642 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 HERC6Q8IVU3 1022 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 PDCL2Q8N4E4 241 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 SLC4A11Q8NBS3 891 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 EPS8L1Q8TE68 723 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 DPF3Q92784 378 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 TMEM176AQ96HP8 235 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 RAD9AQ99638 391 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 ARID3AQ99856 593 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 AGPAT1Q99943 283 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 HERC2P3Q9BVR0 1158 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 NHEJ1Q9H9Q4 299 aaPredicted RBP7.31□□□□□ -1.24
USP16-203ENST00000399975 L1RE1Q9UN81 338 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 FAN1Q9Y2M0 1017 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 RWDD3Q9Y3V2 267 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 SLC4A7Q9Y6M7 1214 aa7.31□□□□□ -1.24
USP16-203ENST00000399975 VDRP11473 427 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 CYP11B1P15538 503 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 CHRNB2P17787 502 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 CYLC1P35663 651 aaPredicted RBP7.3□□□□□ -1.24
USP16-203ENST00000399975 PTK2Q05397 1052 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 RNASELQ05823 741 aaKnown RBP7.3□□□□□ -1.24
USP16-203ENST00000399975 KLHL30Q0D2K2 578 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 ZNF571Q7Z3V5 609 aaPredicted RBP7.3□□□□□ -1.24
USP16-203ENST00000399975 ADGRF2Q8IZF7 708 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 SLC39A11Q8N1S5 342 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 COLGALT1Q8NBJ5 622 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 PKMYT1Q99640 499 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 GDF15Q99988 308 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 MRPL45Q9BRJ2 306 aaKnown RBP7.3□□□□□ -1.24
USP16-203ENST00000399975 PAAF1Q9BRP4 392 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 NT5C1AQ9BXI3 368 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 ELOVL4Q9GZR5 314 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 LHX5Q9H2C1 402 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 HAUS4Q9H6D7 363 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 NXF1Q9UBU9 619 aaKnown RBP7.3□□□□□ -1.24
USP16-203ENST00000399975 DNAJB4Q9UDY4 337 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 ADAM28Q9UKQ2 775 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 INTUQ9ULD6 942 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 STXBP5LQ9Y2K9 1186 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 SNX9Q9Y5X1 595 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 CYP26A1O43174 497 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 MED7O43513 233 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 TBC1D4O60343 1298 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 LSM8O95777 96 aaKnown RBP7.3□□□□□ -1.24
USP16-203ENST00000399975 GZMAP12544 262 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 SKILP12757 684 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 PDE6CP51160 858 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 TCEAL1Q15170 157 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 OTOP2Q7RTS6 562 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 NOP9Q86U38 636 aaKnown RBP7.3□□□□□ -1.24
USP16-203ENST00000399975 METTL23Q86XA0 190 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 ZNF558Q96NG5 402 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 SAMD11Q96NU1 681 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 CHP1Q99653 195 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 ACBD6Q9BR61 282 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 PLVAPQ9BX97 442 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 ZNF518BQ9C0D4 1074 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 AAASQ9NRG9 546 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 CDH9Q9ULB4 789 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 ZMYND8Q9ULU4 1186 aaPredicted RBP7.3□□□□□ -1.24
USP16-203ENST00000399975 NME7Q9Y5B8 376 aa7.3□□□□□ -1.24
USP16-203ENST00000399975 MRPL42Q9Y6G3 142 aaKnown RBP7.3□□□□□ -1.24
USP16-203ENST00000399975 SF3B1O75533 1304 aaKnown RBP eCLIP7.3□□□□□ -1.242e-7■■■■■ 53.5
USP16-203ENST00000399975 COL4A4P53420 1690 aaPredicted RBP7.29□□□□□ -1.24
USP16-203ENST00000399975 BTNL10A8MVZ5 291 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 C5orf67F2Z3F1 127 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 B3GAT3O94766 335 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 C1RP00736 705 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 CYP1A1P04798 512 aaPredicted RBP7.29□□□□□ -1.24
USP16-203ENST00000399975 WEE2P0C1S8 567 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 SYN1P17600 705 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 PPM1AP35813 382 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 GNL1P36915 607 aaPredicted RBP7.29□□□□□ -1.24
USP16-203ENST00000399975 EIF4A3P38919 411 aaKnown RBP7.29□□□□□ -1.24
USP16-203ENST00000399975 MAGEA10P43363 369 aaPredicted RBP7.29□□□□□ -1.24
USP16-203ENST00000399975 OR1G1P47890 313 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 NDST1P52848 882 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 FMO1Q01740 532 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 PLCB3Q01970 1234 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 CNGA2Q16280 664 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 SLC18A3Q16572 532 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 FAM171BQ6P995 826 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 TMEM270Q6UE05 265 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 RAD9BQ6WBX8 426 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 DSTYKQ6XUX3 929 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms