RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 GOLGA5Q8TBA6 731 aa9.06□□□□□ -0.96
USP16-202ENST00000399973 FAM200AQ8TCP9 573 aa9.06□□□□□ -0.96
USP16-202ENST00000399973 FGF13Q92913 245 aa9.06□□□□□ -0.96
USP16-202ENST00000399973 PBXIP1Q96AQ6 731 aa9.06□□□□□ -0.96
USP16-202ENST00000399973 CGRRF1Q99675 332 aa9.06□□□□□ -0.96
USP16-202ENST00000399973 OXCT2Q9BYC2 517 aaPredicted RBP9.06□□□□□ -0.96
USP16-202ENST00000399973 MFSD1Q9H3U5 465 aa9.06□□□□□ -0.96
USP16-202ENST00000399973 KCNK12Q9HB15 430 aa9.06□□□□□ -0.96
USP16-202ENST00000399973 INTS13Q9NVM9 706 aa9.06□□□□□ -0.96
USP16-202ENST00000399973 ABI2Q9NYB9 513 aaPredicted RBP9.06□□□□□ -0.96
USP16-202ENST00000399973 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.06□□□□□ -0.96
USP16-202ENST00000399973 FBXL21Q9UKT6 434 aa9.06□□□□□ -0.96
USP16-202ENST00000399973 L1RE1Q9UN81 338 aa9.06□□□□□ -0.96
USP16-202ENST00000399973 MAPK8IP1Q9UQF2 711 aa9.06□□□□□ -0.96
USP16-202ENST00000399973 SNX9Q9Y5X1 595 aa9.06□□□□□ -0.96
USP16-202ENST00000399973 DENND4CQ5VZ89 1909 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 MYO16Q9Y6X6 1858 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 COL4A3Q01955 1670 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 NARSO43776 548 aaKnown RBP9.05□□□□□ -0.96
USP16-202ENST00000399973 PHACTR2O75167 634 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 KIF20AO95235 890 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 VNN2O95498 520 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 PDGFBP01127 241 aaPredicted RBP9.05□□□□□ -0.96
USP16-202ENST00000399973 NR3C1P04150 777 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 CYP11A1P05108 521 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 CFHP08603 1231 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 POU2F2P09086 479 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 LAMP2P13473 410 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 PTPN2P17706 415 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 RFX1P22670 979 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 ACAT1P24752 427 aaKnown RBP9.05□□□□□ -0.96
USP16-202ENST00000399973 ALDH1A3P47895 512 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 CASP4P49662 377 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 SNRPFP62306 86 aaKnown RBP9.05□□□□□ -0.96
USP16-202ENST00000399973 FAM160A1Q05DH4 1040 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 DUSP4Q13115 394 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 GPR17Q13304 367 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 MYBPC2Q14324 1141 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 PSMD6Q15008 389 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 DUOXA2Q1HG44 320 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 SLC5A9Q2M3M2 681 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 MGAT5BQ3V5L5 792 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 CEP135Q66GS9 1140 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 SCARA3Q6AZY7 606 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 SMYD4Q8IYR2 804 aaPredicted RBP9.05□□□□□ -0.96
USP16-202ENST00000399973 HS6ST3Q8IZP7 471 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 PDCL2Q8N4E4 241 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 ATAD1Q8NBU5 361 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 MCRS1Q96EZ8 462 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 HPDLQ96IR7 371 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 ZNF512Q96ME7 567 aaPredicted RBP9.05□□□□□ -0.96
USP16-202ENST00000399973 KXD1Q9BQD3 176 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 CRISPLD1Q9H336 500 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 ASAH2Q9NR71 780 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 IGSF9Q9P2J2 1179 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 CGNQ9P2M7 1197 aaKnown RBP9.05□□□□□ -0.96
USP16-202ENST00000399973 EPS15L1Q9UBC2 864 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 SIX4Q9UIU6 781 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 CDH7Q9ULB5 785 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 SLC27A5Q9Y2P5 690 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 NUMBLQ9Y6R0 609 aa9.05□□□□□ -0.96
USP16-202ENST00000399973 MYH10P35580 1976 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 HELZP42694 1942 aaKnown RBP9.04□□□□□ -0.96
USP16-202ENST00000399973 CALUO43852 315 aaPredicted RBP9.04□□□□□ -0.96
USP16-202ENST00000399973 KINO60870 393 aaKnown RBP9.04□□□□□ -0.96
USP16-202ENST00000399973 PRPF40AO75400 957 aaKnown RBP9.04□□□□□ -0.96
USP16-202ENST00000399973 RHOBTB3O94955 611 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 PAPLNO95428 1278 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 GJA1P17302 382 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 NR2F2P24468 414 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 EPHB3P54753 998 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 TNNC1P63316 161 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 MYL7Q01449 175 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 TRPC3Q13507 836 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 HTR4Q13639 388 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 VEPH1Q14D04 833 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 TAF12Q16514 161 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 CCDC142Q17RM4 750 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 CYP4A22Q5TCH4 519 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 CENPPQ6IPU0 288 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 MTSS1LQ765P7 747 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 RTL10Q7L3V2 364 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 TRAPPC11Q7Z392 1133 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 C12orf56Q8IXR9 622 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 DCP1BQ8IZD4 617 aaKnown RBP9.04□□□□□ -0.96
USP16-202ENST00000399973 FMR1NBQ8N0W7 255 aaPredicted RBP9.04□□□□□ -0.96
USP16-202ENST00000399973 ERCC4Q92889 916 aaPredicted RBP9.04□□□□□ -0.96
USP16-202ENST00000399973 FGF14Q92915 247 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 TCEAL4Q96EI5 215 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 MFSD14AQ96MC6 490 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 MMS19Q96T76 1030 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 LPIN3Q9BQK8 851 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 RTP3Q9BQQ7 232 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 ZCWPW1Q9H0M4 648 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 KCTD10Q9H3F6 313 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 SLITRK6Q9H5Y7 841 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 DDX43Q9NXZ2 648 aaKnown RBP9.04□□□□□ -0.96
USP16-202ENST00000399973 CEP72Q9P209 647 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 CA14Q9ULX7 337 aa9.04□□□□□ -0.96
USP16-202ENST00000399973 DUSP12Q9UNI6 340 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms