RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 NLRP7Q8WX94 980 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 ANKRD36BP1Q96IX9 119 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 ZDHHC18Q9NUE0 388 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 RASAL2Q9UJF2 1139 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 TNFSF13BQ9Y275 285 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 LACTBL1A8MY62 500 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 H3BRB1 525 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 STAG3L1P0CL83 205 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 CD19P15391 556 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 ZNF484Q5JVG2 852 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 CYP4A22Q5TCH4 519 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 JADE1Q6IE81 842 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 PHF13Q86YI8 300 aaPredicted RBP12.48□□□□□ -0.41
COL25A1-202ENST00000399127 MICALL1Q8N3F8 863 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 PPTC7Q8NI37 304 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 DDX27Q96GQ7 796 aaKnown RBP12.48□□□□□ -0.41
COL25A1-202ENST00000399127 FAXDC2Q96IV6 333 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 C16orf70Q9BSU1 422 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 TUT1Q9H6E5 874 aaKnown RBP12.48□□□□□ -0.41
COL25A1-202ENST00000399127 VTA1Q9NP79 307 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 CHST7Q9NS84 486 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 PCYOX1Q9UHG3 505 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 ANK1P16157 1881 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 FAM187AA6NFU0 413 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 H0YGN5 161 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 ADCY6O43306 1168 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 ITGB3P05106 788 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 SMPD1P17405 629 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 MMP8P22894 467 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 ZNF844Q08AG5 666 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 TRIP13Q15645 432 aaPredicted RBP12.48□□□□□ -0.41
COL25A1-202ENST00000399127 ATP13A4Q4VNC1 1196 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 NAIF1Q69YI7 327 aaPredicted RBP12.48□□□□□ -0.41
COL25A1-202ENST00000399127 ZDHHC24Q6UX98 284 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 IFNL1Q8IU54 200 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 C1orf127Q8N9H9 656 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 NPLOC4Q8TAT6 608 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 MCEEQ96PE7 176 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 KATNBL1Q9H079 304 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 MRPL47Q9HD33 250 aaKnown RBP12.48□□□□□ -0.41
COL25A1-202ENST00000399127 PRMT7Q9NVM4 692 aaPredicted RBP12.48□□□□□ -0.41
COL25A1-202ENST00000399127 GRHL1Q9NZI5 618 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 SIX4Q9UIU6 781 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 NFS1Q9Y697 457 aa12.48□□□□□ -0.41
COL25A1-202ENST00000399127 ASAP2O43150 1006 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 B4GALT4O60513 344 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 RALAP11233 206 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 ARF4P18085 180 aaPredicted RBP12.47□□□□□ -0.41
COL25A1-202ENST00000399127 HPDP32754 393 aaPredicted RBP12.47□□□□□ -0.41
COL25A1-202ENST00000399127 C1QBPQ07021 282 aaKnown RBP12.47□□□□□ -0.41
COL25A1-202ENST00000399127 GRB14Q14449 540 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 PPP1R7Q15435 360 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 SURF1Q15526 300 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 AMHR2Q16671 573 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 ZFYVE27Q5T4F4 411 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 UBAP2Q5T6F2 1119 aaKnown RBP12.47□□□□□ -0.41
COL25A1-202ENST00000399127 PLEKHA7Q6IQ23 1121 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 LRRC31Q6UY01 552 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 ANKS1BQ7Z6G8 1248 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 ACSF2Q96CM8 615 aaPredicted RBP12.47□□□□□ -0.41
COL25A1-202ENST00000399127 PDZD7Q9H5P4 517 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 PARVAQ9NVD7 372 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.47□□□□□ -0.41
COL25A1-202ENST00000399127 R3HDM2Q9Y2K5 976 aaKnown RBP12.47□□□□□ -0.41
COL25A1-202ENST00000399127 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.47□□□□□ -0.41
COL25A1-202ENST00000399127 PI4K2BG5E9Z4 385 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 SLC10A3P09131 477 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 SLC1A1P43005 524 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 LACTBP83111 547 aaPredicted RBP12.47□□□□□ -0.41
COL25A1-202ENST00000399127 PRAMEF19Q5SWL8 479 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 DPH6Q7L8W6 267 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 WDTC1Q8N5D0 677 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.47□□□□□ -0.41
COL25A1-202ENST00000399127 KAT2BQ92831 832 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 ITFG2Q969R8 447 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 RNF25Q96BH1 459 aaPredicted RBP12.47□□□□□ -0.41
COL25A1-202ENST00000399127 MIEF2Q96C03 454 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 MAML3Q96JK9 1138 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 PLVAPQ9BX97 442 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 CAPS2Q9BXY5 557 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 SMYD3Q9H7B4 428 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 TJP2Q9UDY2 1190 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 HMGXB4Q9UGU5 601 aa12.47□□□□□ -0.41
COL25A1-202ENST00000399127 TRPM7Q96QT4 1865 aa12.46□□□□□ -0.41
COL25A1-202ENST00000399127 PASKQ96RG2 1323 aa12.46□□□□□ -0.41
COL25A1-202ENST00000399127 A0A087WUV0 522 aaPredicted RBP12.46□□□□□ -0.41
COL25A1-202ENST00000399127 GOLGA6L10A6NI86 522 aa12.46□□□□□ -0.41
COL25A1-202ENST00000399127 FSCN2O14926 492 aa12.46□□□□□ -0.41
COL25A1-202ENST00000399127 MYZAPP0CAP1 466 aa12.46□□□□□ -0.41
COL25A1-202ENST00000399127 PDCLQ13371 301 aa12.46□□□□□ -0.41
COL25A1-202ENST00000399127 CYP1B1Q16678 543 aa12.46□□□□□ -0.41
COL25A1-202ENST00000399127 MTHFD1LQ6UB35 978 aa12.46□□□□□ -0.41
COL25A1-202ENST00000399127 CD302Q8IX05 232 aa12.46□□□□□ -0.41
COL25A1-202ENST00000399127 UHMK1Q8TAS1 419 aaKnown RBP12.46□□□□□ -0.41
COL25A1-202ENST00000399127 FEZF2Q8TBJ5 459 aa12.46□□□□□ -0.41
COL25A1-202ENST00000399127 LENG1Q96BZ8 264 aaPredicted RBP12.46□□□□□ -0.41
COL25A1-202ENST00000399127 VCPIP1Q96JH7 1222 aa12.46□□□□□ -0.41
COL25A1-202ENST00000399127 ATP6V1G3Q96LB4 118 aa12.46□□□□□ -0.41
COL25A1-202ENST00000399127 ZIC5Q96T25 663 aa12.46□□□□□ -0.41
COL25A1-202ENST00000399127 FAM49AQ9H0Q0 323 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms