RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 KRT10P13645 584 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 RPS6KA3P51812 740 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 DPP9Q86TI2 863 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 ATP8B4Q8TF62 1192 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 DEPDC1BQ8WUY9 529 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 CKAP2Q8WWK9 683 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 CCDC97Q96F63 343 aaPredicted RBP15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 GMCL1Q96IK5 515 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 LMO7Q8WWI1 1683 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 GAKO14976 1311 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 XPO1O14980 1071 aaKnown RBP15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 CRCPO75575 148 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 C3orf62Q6ZUJ4 267 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 SCUBE1Q8IWY4 988 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 TTC8Q8TAM2 541 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 CCDC138Q96M89 665 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 RPF1Q9H9Y2 349 aaKnown RBP15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 ZBBXA8MT70 800 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 RFX1P22670 979 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 TM4SF1P30408 202 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 GARSP41250 739 aaKnown RBP15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 SLC12A2P55011 1212 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 SMAD1Q15797 465 aaKnown RBP15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 ZNF568Q3ZCX4 644 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 FSCBQ5H9T9 825 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 ZNF667Q5HYK9 610 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 AGR3Q8TD06 166 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 BAP1Q92560 729 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 POP1Q99575 1024 aaKnown RBP15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 ZNF184Q99676 751 aaPredicted RBP15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 SIKE1Q9BRV8 207 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 TMEM117Q9H0C3 514 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 KIAA1586Q9HCI6 787 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 NDUFA13Q9P0J0 144 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 TSC22D4Q9Y3Q8 395 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 MOXD1Q6UVY6 613 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 RAPH1Q70E73 1250 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 SCFD2Q8WU76 684 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 FAM49AQ9H0Q0 323 aaPredicted RBP15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 NEUROG2Q9H2A3 272 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 UVRAGQ9P2Y5 699 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 DPEP1P16444 411 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 HOXA10P31260 410 aaPredicted RBP15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 CAP2P40123 477 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 MMP13P45452 471 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 IFRD2Q12894 506 aaPredicted RBP15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 ZNF699Q32M78 642 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 FAM47CQ5HY64 1035 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 IYDQ6PHW0 289 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 ISLR2Q6UXK2 745 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 ALKBH8Q96BT7 664 aaKnown RBP15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 MYL2P10916 166 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 ETS2P15036 469 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 HNRNPH3P31942 346 aaKnown RBP15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 MRPS9P82933 396 aaKnown RBP15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 ECM1Q16610 540 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 LRRC55Q6ZSA7 311 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 ZNF720Q7Z2F6 126 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 EXOC3L1Q86VI1 746 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 PSPC1Q8WXF1 523 aaKnown RBP15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 LPAR1Q92633 364 aa15.31■□□□□ 0.04
RPRD1A-202ENST00000399022 SPDYE2BA6NHP3 402 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 CLPTM1O96005 669 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 SPDYE6P0CI01 402 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 PSMC1P62191 440 aaKnown RBP15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 PRAMEP78395 509 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 MTFR1Q15390 333 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 SEZ6Q53EL9 994 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 STYK1Q6J9G0 422 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 TRIM50Q86XT4 487 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 DCLK2Q8N568 766 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 C1orf131Q8NDD1 294 aaKnown RBP15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 DNAJC19Q96DA6 116 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 FAM111AQ96PZ2 611 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 MAGED2Q9UNF1 606 aaPredicted RBP15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 NOD1Q9Y239 953 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 TMX2Q9Y320 296 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 RALAP11233 206 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 SOX10P56693 466 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 TKFCQ3LXA3 575 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 AADACL2Q6P093 401 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 SLC20A1Q8WUM9 679 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 OTUD5Q96G74 571 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 MED10Q9BTT4 135 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 CCDC68Q9H2F9 335 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 TBC1D23Q9NUY8 699 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 WARS2Q9UGM6 360 aaKnown RBP15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 KIF13AQ9H1H9 1805 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 A0A0A6YYK5 440 aaPredicted RBP15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 DDX3XO00571 662 aaKnown RBP eCLIP15.3■□□□□ 0.046e-9■□□□□ 10
RPRD1A-202ENST00000399022 DGAT1O75907 488 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 KRT36O76013 467 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 PPP6R3Q5H9R7 873 aaPredicted RBP15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 MAB21L3Q8N8X9 362 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 CCT7Q99832 543 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 BTBD10Q9BSF8 475 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 FAM192AQ9GZU8 254 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 KCND2Q9NZV8 630 aa15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 SETD1AO15047 1707 aaKnown RBP15.3■□□□□ 0.04
RPRD1A-202ENST00000399022 SLITRK3O94933 977 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms