RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 DNAAF5Q86Y56 855 aa29.32■■■□□ 2.28
CPNE1-203ENST00000397442 TOP6BLQ8N6T0 577 aa29.32■■■□□ 2.28
CPNE1-203ENST00000397442 SEPT11Q9NVA2 429 aaKnown RBP29.32■■■□□ 2.28
CPNE1-203ENST00000397442 RNF216Q9NWF9 866 aaPredicted RBP29.32■■■□□ 2.28
CPNE1-203ENST00000397442 PFKMP08237 780 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 CFHP08603 1231 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 ACRP10323 421 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 NYAP1Q6ZVC0 841 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 DPH6Q7L8W6 267 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 APPL2Q8NEU8 664 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 TMEM176AQ96HP8 235 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 SENP8Q96LD8 212 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 PACSIN1Q9BY11 444 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 IL23AQ9NPF7 189 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 LZTFL1Q9NQ48 299 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 COL4A6Q14031 1691 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 GOLGA6L9A6NEM1 432 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 CYB561D2O14569 222 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 THAP12O43422 761 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 B3GAT3O94766 335 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 BRD2P25440 801 aaKnown RBP29.31■■■□□ 2.28
CPNE1-203ENST00000397442 C10orf76Q5T2E6 689 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 PDCL2Q8N4E4 241 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 RRAGDQ9NQL2 400 aaPredicted RBP29.31■■■□□ 2.28
CPNE1-203ENST00000397442 DNAJB4Q9UDY4 337 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 TRIM10Q9UDY6 481 aa29.31■■■□□ 2.28
CPNE1-203ENST00000397442 F8W810 466 aa29.3■■■□□ 2.28
CPNE1-203ENST00000397442 PJA2O43164 708 aa29.3■■■□□ 2.28
CPNE1-203ENST00000397442 HUS1O60921 280 aa29.3■■■□□ 2.28
CPNE1-203ENST00000397442 ITGB1P05556 798 aa29.3■■■□□ 2.28
CPNE1-203ENST00000397442 RNASELQ05823 741 aaKnown RBP29.3■■■□□ 2.28
CPNE1-203ENST00000397442 TIGD5Q53EQ6 642 aa29.3■■■□□ 2.28
CPNE1-203ENST00000397442 DCLRE1AQ6PJP8 1040 aa29.3■■■□□ 2.28
CPNE1-203ENST00000397442 C16orf59Q7L2K0 433 aa29.3■■■□□ 2.28
CPNE1-203ENST00000397442 NT5C1AQ9BXI3 368 aa29.3■■■□□ 2.28
CPNE1-203ENST00000397442 PUF60Q9UHX1 559 aaKnown RBP29.3■■■□□ 2.28
CPNE1-203ENST00000397442 KIF4AO95239 1232 aa29.29■■■□□ 2.28
CPNE1-203ENST00000397442 PAN2Q504Q3 1202 aaKnown RBP29.29■■■□□ 2.28
CPNE1-203ENST00000397442 UNC93AQ86WB7 457 aa29.29■■■□□ 2.28
CPNE1-203ENST00000397442 ADGRF2Q8IZF7 708 aa29.29■■■□□ 2.28
CPNE1-203ENST00000397442 ISCUQ9H1K1 167 aa29.29■■■□□ 2.28
CPNE1-203ENST00000397442 NRDE2Q9H7Z3 1164 aa29.29■■■□□ 2.28
CPNE1-203ENST00000397442 TMCO5BA8MYB1 307 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 HCRTO43612 131 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 UPP2O95045 317 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 FAM163BP0C2L3 166 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 GZMAP12544 262 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 WSCD1Q658N2 575 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 C7orf61Q8IZ16 206 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 OR6B3Q8NGW1 331 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 RSPH1Q8WYR4 309 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 TOP1MTQ969P6 601 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 HCSTQ9UBK5 93 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 PRKAG2Q9UGJ0 569 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 DUSP10Q9Y6W6 482 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 ATP8B3O60423 1300 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 TBKBP1A7MCY6 615 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 DGKIO75912 1065 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 CYP1A1P04798 512 aaPredicted RBP29.28■■■□□ 2.28
CPNE1-203ENST00000397442 UNGP13051 313 aaPredicted RBP29.28■■■□□ 2.28
CPNE1-203ENST00000397442 WARSP23381 471 aaKnown RBP29.28■■■□□ 2.28
CPNE1-203ENST00000397442 BRCC3P46736 316 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 WDR5P61964 334 aaKnown RBP29.28■■■□□ 2.28
CPNE1-203ENST00000397442 DEFB103AP81534 67 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 CLEC16AQ2KHT3 1053 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 OSTM1Q86WC4 334 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 HASPINQ8TF76 798 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 BADQ92934 168 aa29.28■■■□□ 2.28
CPNE1-203ENST00000397442 C16orf45Q96MC5 204 aaPredicted RBP29.28■■■□□ 2.28
CPNE1-203ENST00000397442 LUC7LQ9NQ29 371 aaKnown RBP29.28■■■□□ 2.28
CPNE1-203ENST00000397442 TMEM189-UBE2V1I3L0A0 370 aa29.27■■■□□ 2.28
CPNE1-203ENST00000397442 GABRDO14764 452 aa29.27■■■□□ 2.28
CPNE1-203ENST00000397442 EFCAB14O75071 495 aa29.27■■■□□ 2.28
CPNE1-203ENST00000397442 CD19P15391 556 aa29.27■■■□□ 2.28
CPNE1-203ENST00000397442 PAX3P23760 479 aa29.27■■■□□ 2.28
CPNE1-203ENST00000397442 LMO2P25791 158 aa29.27■■■□□ 2.28
CPNE1-203ENST00000397442 SSTR3P32745 418 aaPredicted RBP29.27■■■□□ 2.28
CPNE1-203ENST00000397442 ARHGAP29Q52LW3 1261 aa29.27■■■□□ 2.28
CPNE1-203ENST00000397442 DSTYKQ6XUX3 929 aa29.27■■■□□ 2.28
CPNE1-203ENST00000397442 FAM193BQ96PV7 902 aaPredicted RBP29.27■■■□□ 2.28
CPNE1-203ENST00000397442 MRPL9Q9BYD2 267 aaKnown RBP29.27■■■□□ 2.28
CPNE1-203ENST00000397442 PCDHGC3Q9UN70 934 aa29.27■■■□□ 2.28
CPNE1-203ENST00000397442 STXBP5LQ9Y2K9 1186 aa29.27■■■□□ 2.28
CPNE1-203ENST00000397442 TSC2P49815 1807 aa29.26■■■□□ 2.28
CPNE1-203ENST00000397442 FAM170AA1A519 330 aa29.26■■■□□ 2.27
CPNE1-203ENST00000397442 I3L4J1 428 aa29.26■■■□□ 2.27
CPNE1-203ENST00000397442 M0QZQ0 153 aa29.26■■■□□ 2.27
CPNE1-203ENST00000397442 GNL1P36915 607 aaPredicted RBP29.26■■■□□ 2.27
CPNE1-203ENST00000397442 KIF5AQ12840 1032 aa29.26■■■□□ 2.27
CPNE1-203ENST00000397442 CYFIP2Q96F07 1278 aa29.26■■■□□ 2.27
CPNE1-203ENST00000397442 IRX2Q9BZI1 471 aaPredicted RBP29.26■■■□□ 2.27
CPNE1-203ENST00000397442 A8MXQ7 604 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 RTN2O75298 545 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 BAIAP3O94812 1187 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 AMHP03971 560 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 VDRP11473 427 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 OR1G1P47890 313 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 GALCP54803 685 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 ACOT1Q86TX2 421 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 HEXIM2Q96MH2 286 aaKnown RBP29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms