RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 RGS2P41220 211 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 ACCSLQ4AC99 568 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 HABP4Q5JVS0 413 aaKnown RBP11.75□□□□□ -0.53
IFT140-202ENST00000397417 JADE1Q6IE81 842 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 GLB1LQ6UWU2 654 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 TTC30AQ86WT1 665 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 C12orf29Q8N999 325 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 USP38Q8NB14 1042 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 CCDC68Q9H2F9 335 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 L1RE1Q9UN81 338 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 SIPA1L3O60292 1781 aaPredicted RBP11.74□□□□□ -0.53
IFT140-202ENST00000397417 NFICP08651 508 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 HOXD10P28358 340 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 NDST1P52848 882 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 MAP3K7CLP57077 242 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 POU5F1BQ06416 359 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 ARHGEF6Q15052 776 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 ARL13BQ3SXY8 428 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 XRRA1Q6P2D8 792 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 ENOSF1Q7L5Y1 443 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 DEPDC1BQ8WUY9 529 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 MAML1Q92585 1016 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 TNIP3Q96KP6 325 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 RBM15Q96T37 977 aaKnown RBP eCLIP11.74□□□□□ -0.53
IFT140-202ENST00000397417 TINF2Q9BSI4 451 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 TLR10Q9BXR5 811 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 WNT8AQ9H1J5 351 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 RRP15Q9Y3B9 282 aaKnown RBP11.74□□□□□ -0.53
IFT140-202ENST00000397417 TRIM17Q9Y577 477 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 TRPM3Q9HCF6 1732 aaPredicted RBP11.74□□□□□ -0.53
IFT140-202ENST00000397417 TFDP2Q14188 446 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 TRADDQ15628 312 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 ANO4Q32M45 955 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 SPATA2LQ8IUW3 424 aaPredicted RBP11.74□□□□□ -0.53
IFT140-202ENST00000397417 FEZF2Q8TBJ5 459 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 ABHD16BQ9H3Z7 469 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 DDIT4Q9NX09 232 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 STAP1Q9ULZ2 295 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 KRT7P08729 469 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 PTGER2P43116 358 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 SLC29A2Q14542 456 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 TTC31Q49AM3 519 aaPredicted RBP11.74□□□□□ -0.53
IFT140-202ENST00000397417 DNERQ8NFT8 737 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 PGBD4Q96DM1 585 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 ZNF560Q96MR9 790 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 ZIM3Q96PE6 472 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 SMYD3Q9H7B4 428 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 TXNRD2Q9NNW7 524 aa11.74□□□□□ -0.53
IFT140-202ENST00000397417 MARCOQ9UEW3 520 aaPredicted RBP11.74□□□□□ -0.53
IFT140-202ENST00000397417 A0A1W2PQJ5 194 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 PODXLO00592 558 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 TSPAN3O60637 253 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 ABCD1P33897 745 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 E2F5Q15329 346 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 ACAD10Q6JQN1 1059 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 BTNL9Q6UXG8 535 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 RFX8Q6ZV50 586 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 GPR142Q7Z601 462 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 CDKL2Q92772 493 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 NT5C1B-RDH14C9J2C7 533 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 F8VP50 259 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 M0QYT0 321 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 CYB561D2O14569 222 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 CLGNO14967 610 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 AP1G2O75843 785 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 CYP3A4P08684 503 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 HSPA6P17066 643 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 RABGGTBP53611 331 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 FCGRTP55899 365 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 FKBP1AP62942 108 aaKnown RBP11.73□□□□□ -0.53
IFT140-202ENST00000397417 EFHC2Q5JST6 749 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 CLEC4DQ8WXI8 215 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 FSD1LQ9BXM9 530 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 UNKQ9C0B0 810 aaKnown RBP11.73□□□□□ -0.53
IFT140-202ENST00000397417 IGLV3-22A0A075B6J6 115 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 LRRC10BA6NIK2 292 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 EIF4E1BA6NMX2 242 aaKnown RBP11.73□□□□□ -0.53
IFT140-202ENST00000397417 MYO1CO00159 1063 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 RECQL4O94761 1208 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 CHRNA3P32297 505 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 PBX1P40424 430 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 ARHGAP25P42331 645 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 CPT1AP50416 773 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 CCL23P55773 120 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 ROR1Q01973 937 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 DEUP1Q05D60 604 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 CUL1Q13616 776 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 ATP11CQ8NB49 1132 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 GSDMBQ8TAX9 411 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 RAB3IL1Q8TBN0 382 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 CASKIN2Q8WXE0 1202 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 SEMA4DQ92854 862 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 TIPINQ9BVW5 301 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 XPNPEP3Q9NQH7 507 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 FAM53CQ9NYF3 392 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 KCNH4Q9UQ05 1017 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 TAF1P21675 1872 aa11.73□□□□□ -0.53
IFT140-202ENST00000397417 KBTBD13C9JR72 458 aa11.72□□□□□ -0.53
IFT140-202ENST00000397417 SH3BP5O60239 455 aa11.72□□□□□ -0.53
IFT140-202ENST00000397417 PYGMP11217 842 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms