RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 ADGBQ8N7X0 1667 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 KIF1BO60333 1816 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 RPS12P25398 132 aaKnown RBP18.23■□□□□ 0.51
MCF2L-208ENST00000397030 HORMAD1Q86X24 394 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 DDX47Q9H0S4 455 aaKnown RBP18.23■□□□□ 0.51
MCF2L-208ENST00000397030 RNF208Q9H0X6 261 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 TSPAN3O60637 253 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 AP1G2O75843 785 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 CAV1Q03135 178 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 MIER2Q8N344 545 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 NEDD1Q8NHV4 660 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 TGS1Q96RS0 853 aaKnown RBP18.23■□□□□ 0.51
MCF2L-208ENST00000397030 MSRAQ9UJ68 235 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 RCOR1Q9UKL0 485 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 EGFRP00533 1210 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 NDUFS2O75306 463 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 PMPCBO75439 489 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 POMCP01189 267 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 BTG3Q14201 252 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-208ENST00000397030 DEPDC1Q5TB30 811 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.22■□□□□ 0.51
MCF2L-208ENST00000397030 LIMA1Q9UHB6 759 aaKnown RBP18.22■□□□□ 0.51
MCF2L-208ENST00000397030 RTN2O75298 545 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 AMHP03971 560 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 PDIA6Q15084 440 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 KCNV2Q8TDN2 545 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 ZFYVE1Q9HBF4 777 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 VPS28Q9UK41 221 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 DDNO94850 711 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-208ENST00000397030 KRT20P35900 424 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 ZNF543Q08ER8 600 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 GTF2H1P32780 548 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 ARFIP2P53365 341 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 ZBTB17Q13105 803 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 SGCGQ13326 291 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 C16orf72Q14CZ0 275 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 P3H1Q32P28 736 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 PARD6BQ9BYG5 372 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 PVALEFA0A1B0GWK0 134 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 ESYT3A0FGR9 886 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 EIF4E1BA6NMX2 242 aaKnown RBP18.22■□□□□ 0.51
MCF2L-208ENST00000397030 ZNF512BQ96KM6 892 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-208ENST00000397030 ABCB6Q9NP58 842 aa18.22■□□□□ 0.51
MCF2L-208ENST00000397030 MRPL42Q9Y6G3 142 aaKnown RBP18.22■□□□□ 0.51
MCF2L-208ENST00000397030 HAUS5O94927 633 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 DOK6Q6PKX4 331 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 IFNEQ86WN2 208 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 PDHXO00330 501 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 GPC1P35052 558 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 MAP3K7CLP57077 242 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 MAGOHP61326 146 aaKnown RBP18.21■□□□□ 0.51
MCF2L-208ENST00000397030 TEDDM1Q5T9Z0 273 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 ST13P4Q8IZP2 240 aaPredicted RBP18.21■□□□□ 0.51
MCF2L-208ENST00000397030 MIR1-1HGQ9H1L0 117 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 PCMTD2Q9NV79 361 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 TUBE1Q9UJT0 475 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 HOXA2O43364 376 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 ACADSBP45954 432 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 STILQ15468 1287 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 CCDC142Q17RM4 750 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 GOLPH3LQ9H4A5 285 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 TDRKHQ9Y2W6 561 aaKnown RBP18.21■□□□□ 0.51
MCF2L-208ENST00000397030 ERVK-7P63135 1459 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 M0QYT0 321 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 CYB561D2O14569 222 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 ENTPD3O75355 529 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 IL10P22301 178 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 SH3BGRP55822 239 aaPredicted RBP18.21■□□□□ 0.51
MCF2L-208ENST00000397030 TOB2Q14106 344 aaPredicted RBP18.21■□□□□ 0.51
MCF2L-208ENST00000397030 MTHFD1LQ6UB35 978 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 PRMT7Q9NVM4 692 aaPredicted RBP18.21■□□□□ 0.51
MCF2L-208ENST00000397030 STX7O15400 261 aaKnown RBP18.21■□□□□ 0.51
MCF2L-208ENST00000397030 TEX33O43247 280 aa18.21■□□□□ 0.51
MCF2L-208ENST00000397030 PSMD12O00232 456 aaPredicted RBP18.2■□□□□ 0.5
MCF2L-208ENST00000397030 GPAT2Q6NUI2 795 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 DIS3LQ8TF46 1054 aaKnown RBP18.2■□□□□ 0.5
MCF2L-208ENST00000397030 EMILIN2Q9BXX0 1053 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 FAM96AQ9H5X1 160 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 DISP1Q96F81 1524 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 CCDC188H7C350 402 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 ATMINO43313 823 aaPredicted RBP18.2■□□□□ 0.5
MCF2L-208ENST00000397030 CLASP2O75122 1294 aaKnown RBP18.2■□□□□ 0.5
MCF2L-208ENST00000397030 ACO1P21399 889 aaKnown RBP18.2■□□□□ 0.5
MCF2L-208ENST00000397030 GPD1P21695 349 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 PTPN7P35236 360 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 RAP1GAPP47736 663 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 FOXO4P98177 505 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 AMPD2Q01433 879 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 EPC2Q52LR7 807 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 SARM1Q6SZW1 724 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 RCOR2Q8IZ40 523 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 TEX9Q8N6V9 391 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 MXRA8Q9BRK3 442 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 GEMIN8Q9NWZ8 242 aaKnown RBP18.2■□□□□ 0.5
MCF2L-208ENST00000397030 ATXN3LQ9H3M9 355 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 TRPM5Q9NZQ8 1165 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 CLCN3P51790 818 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 ZNF284Q2VY69 593 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 RIN2Q8WYP3 895 aaPredicted RBP18.2■□□□□ 0.5
MCF2L-208ENST00000397030 TBC1D12O60347 775 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms